• Title/Summary/Keyword: CCA

Search Result 434, Processing Time 0.024 seconds

Risk Factors for Cholangiocarcinoma in the Lower Part of Northeast Thailand: a Hospital-based Case-control Study

  • Manwong, Mereerat;Songserm, Nopparat;Promthet, Supannee;Matsuo4, Keitaro
    • Asian Pacific Journal of Cancer Prevention
    • /
    • v.14 no.10
    • /
    • pp.5953-5956
    • /
    • 2013
  • Background: Cholangiocarcinoma (CCA) is the most common cancer in Northeast Thailand. It is also a crucial health problem for Thai people. Various risk factors for CCA have been identified in the upper part of Northeast Thailand, but no similar studies of risk factors have been conducted in the lower parts of the region. This study aimed to investigate factors associated with CCA in the resident population. Materials and Methods: A hospital-based case-control study was conducted during 2009-2012 with the recruitment of 123 CCA cases and 123 non-CCA patient controls, matched for sex, age and residential area. Information was collected by interview with a structured questionnaire. Blood samples were collected for assays of anti-OV antibodies. Associations between various personal factors, dietary habits, family history, the presence of anti-OV antibodies and CCA were analyzed using multiple conditional logistic regression. Results: Patients who consumed raw meat (beef, pork) and alcoholic beverages ${\geq}3$ times per week had a higher risk of CCA than non-consumers ($OR_{adj}$=4.33; 95%CI=1.14-16.35 and $OR_{adj}$=2.13; 95%CI=1.00-4.55, respectively). Patients who had a family history of cancer had a higher risk than those who did not ($OR_{adj}$=4.34; 95%CI=1.80-10.43). Also, patients who had anti-OV antibodies (AU>23.337) had a higher risk than those whose anti-OV antibodies were below the cut-off ($AU{\leq}23.34$) ($OR_{adj}$=3.09; 95%CI=1.04-9.16). Conclusions: As is the case in the upper part of Northeast Thailand, OV infection is a crucial risk factor for CCA in people who live in lower part of the region. Similarly, a family history of cancer and the consumption of alcohol are risk factors for CCA.

CCA 방부 목재로 지은 통나무집 주변 토양의 중금속 오염도 평가

  • Park Eun-Ju;Song Byeong-Yeol;Gu Jin-Hui;Ryu Seung-Hye;Kim Dong-Jin;Kim Hui-Gap
    • Proceedings of the Korean Society of Soil and Groundwater Environment Conference
    • /
    • 2006.04a
    • /
    • pp.234-237
    • /
    • 2006
  • 방부 목재는 일반 목재에 비해 사용 수명이 20-40년 정도 길기 때문에 사용이 점차 증가하고 있다 국내에서 가장 널리 사용되는 방부제는 chromate copper arsenate(CCA)이다 CCA 성분인 구리, 크롬 및 비소는 생태계 및 인체에 대한 위해성 때문에 많은 나라에서 처리 목재의 사용을 금지하거나 제한하고 있는 실정인 반면에, 국내에서의 사용은 늘어만 가고 있는 실정이다. 이 연구에서는 방부 목재를 사용하여 지은 3년 된 통나무집 한 곳과 8년 된 통나무집 두 곳에 인접한 토양시료를 채취, 분석하여 방부 목재 사용으로 인한 토양 오염도를 평가하였다. 건물에 인접한 지점부터 수평 방향으로 25cm 간격으로 100cm까지 5개의 표토 시료를 채취하였다. 또한 배경 농도를 알아보기 위해서 건물에서 조금 떨어진 곳에서 토양시료를 2개 채취하였다. 토양시료는 입도, 전기전도도, pH, 유기물 함량 등의 물리 화학적 성질에 대해 분석하였으며, CCA성분은 microwave oven을 이용하여 추출한 후 분석하였다. 0cm에서 CCA성분은 배경 농도보다. 높게 나타났다. 용출양은 3년 된 통나무집의 경우 크롬(67.2mg/kg)>구리(20.3mg/kg)>비소(4.14mg/kg)의 순으로 측정되었으며, 8년 된 통나무집의 경우 크롬(36.6mg/kg)>구리(21.3mg/kg)>비소(1.93mg/kg)의 순으로 측정되었다. 구리를 제외하고 크롬과 비소의 경우 3년 된 통나무집에서 많이 용출되는 것을 알 수 있었다. 3년 된 통나무집의 구리와 크롬은 100cm농도가 배경농도보다. 높게 나타났으며, 비소의 경우는 100cm농도가 배경농도보다. 낮게 나타났다. 이는 구리와 크롬이 100cm이상으로 이동을 한다는 것을 알려주며, 8년 된 통나무집의 경우는 크롬과 비소가 100cm이상으로 이동한다는 것을 알 수 있었다. 이 연구를 통해 CCA로 처리된 방부목재에서는 CCA성분이 용출되는 것을 알 수 있었으며, 크롬과 비소의 경우는 초기에 많이 용출되고, 구리의 경우는 꾸준히 용출되는 것을 알 수 있었다. 3년 된 통나무집이 8년 된 통나무집보다. 용출양이 더 컸으며, 이는 CCA성분이 초기에 많이 용출된다는 것을 의미한다.

  • PDF

Identification and Validation of Novel Biomarkers and Potential Targeted Drugs in Cholangiocarcinoma: Bioinformatics, Virtual Screening, and Biological Evaluation

  • Wang, Jiena;Zhu, Weiwei;Tu, Junxue;Zheng, Yihui
    • Journal of Microbiology and Biotechnology
    • /
    • v.32 no.10
    • /
    • pp.1262-1274
    • /
    • 2022
  • Cholangiocarcinoma (CCA) is a complex and refractor type of cancer with global prevalence. Several barriers remain in CCA diagnosis, treatment, and prognosis. Therefore, exploring more biomarkers and therapeutic drugs for CCA management is necessary. CCA gene expression data was downloaded from the TCGA and GEO databases. KEGG enrichment, GO analysis, and protein-protein interaction network were used for hub gene identification. miRNA were predicted using Targetscan and validated according to several GEO databases. The relative RNA and miRNA expression levels and prognostic information were obtained from the GEPIA. The candidate drug was screened using pharmacophore-based virtual screening and validated by molecular modeling and through several in vitro studies. 301 differentially expressed genes (DEGs) were screened out. Complement and coagulation cascades-related genes (including AHSG, F2, TTR, and KNG1), and cell cycle-related genes (including CDK1, CCNB1, and KIAA0101) were considered as the hub genes in CCA progression. AHSG, F2, TTR, and KNG1 were found to be significantly decreased and the eight predicted miRNA targeting AHSG, F2, and TTR were increased in CCA patients. CDK1, CCNB1, and KIAA0101 were found to be significantly abundant in CCA patients. In addition, Molport-003-703-800, which is a compound that is derived from pharmacophores-based virtual screening, could directly bind to CDK1 and exhibited anti-tumor activity in cholangiocarcinoma cells. AHSG, F2, TTR, and KNG1 could be novel biomarkers for CCA. Molport-003-703-800 targets CDK1 and work as potential cell cycle inhibitors, thereby having potential for consideration for new chemotherapeutics for CCA.

A comparison study of canonical methods: Application to -Omics data (오믹스 자료를 이용한 정준방법 비교)

  • Seungsoo Lee;Eun Jeong Min
    • The Korean Journal of Applied Statistics
    • /
    • v.37 no.2
    • /
    • pp.157-176
    • /
    • 2024
  • Integrative analysis for better understanding of complex biological systems gains more attention. Observing subjects from various perspectives and conducting integrative analysis of those multiple datasets enables a deeper understanding of the subject. In this paper, we compared two methods that simultaneously consider two datasets gathered from the same objects, canonical correlation analysis (CCA) and co-inertia analysis (CIA). Since CCA cannot handle the case when the data exhibit high-dimensionality, two strategies were considered instead: Utilization of a ridge constant (CCA-ridge) and substitution of covariance matrices of each data to identity matrix and then applying penalized singular value decomposition (CCA-PMD). To illustrate CIA and CCA, both extensions of CCA and CIA were applied to NCI60 cell line data. It is shown that both methods yield biologically meaningful and significant results by identifying important genes that enhance our comprehension of the data. Their results shows some dissimilarities arisen from the different criteria used to measure the relationship between two sets of data in each method. Additionally, CIA exhibits variations dependent on the weight matrices employed.

Survival analysis of extrahepatic cholangiocarcinoma based on surveillance, epidemiology, and end results database

  • Hassam Ali;Joshua Zweigle;Pratik Patel;Brandon Tedder;Rafeh Khan;Saurabh Agrawal
    • Annals of Hepato-Biliary-Pancreatic Surgery
    • /
    • v.27 no.2
    • /
    • pp.151-157
    • /
    • 2023
  • Backgrounds/Aims: Cholangiocarcinoma (CCA) can be classified as intrahepatic CCA or extrahepatic CCA (eCCA). We intended to analyze and reports the survival outcomes for eCCA. Methods: Surveillance, epidemiology, and end results (SEER) registry, site recode C24.0, was used to select cases of eCCA from 2000 to 2018. Patients with incomplete data or ages <18 years were excluded. Results: Male (52.69%) and White race (77.99%) predominated. Compared with 2000-2006, survival increased in 2013 (adjusted hazard ratio [HRadj]: 0.68, 95% confidence interval [CI] 0.58-0.70; p < 0.01). Surgery with chemoradiotherapy (HRadj: 0.69, 95% CI 0.60-0.7; p < 0.01) and surgery with chemotherapy (HRadj: 0.72, 95% CI 0.62-0.83; p < 0.01) improved survival over surgery alone. Compared with surgery without lymph node (LN) removal, surgery of four or more regional LN reduced the risk of death by 58% (HRadj: 0.42, 95% CI 0.36-0.51; p < 0.01). Compared with patients without surgery, patients who underwent bile duct excision (HRadj: 0.82, 95% CI 0.72-0.94; p < 0.01), simple or extended lobectomy (HRadj: 0.85, 95% CI 0.75-0.95; p = 0.009), and hepatectomy (HRadj: 0.80, 95% CI 0.72-0.88; p < 0.01) significantly improved survival. Patients with distal CCA had a 17% higher survival than perihilar CCA (HRadj: 0.83, 95% CI 0.74-0.92; p < 0.01) and LN dissection was equally beneficial for both subgroups (p < 0.01). Conclusions: Surgery with chemoradiotherapy has a proven increase in the 5-year survival of the eCCA. LN resection, bile duct excision, lobectomy, and hepatectomy have better outcomes.

Serum Cathepsin B to Cystatin C Ratio as a Potential Marker for the Diagnosis of Cholangiocarcinoma

  • Monsouvanh, Ammala;Proungvitaya, Tanakorn;Limpaiboon, Temduang;Wongkham, Chaisiri;Wongkham, Sopit;Luvira, Vor;Proungvitaya, Siriporn
    • Asian Pacific Journal of Cancer Prevention
    • /
    • v.15 no.21
    • /
    • pp.9511-9515
    • /
    • 2014
  • Cholangiocarcinoma (CCA) is a cancer of the bile duct epithelial cells. The highest incidence rate of CCA with a poor prognosis and poor response to chemotherapy is found in Southeast Asian countries, especially in northeastern Thailand and Lao PDR. Cathepsin B is a lysosomal cysteine protease which is regulated by cysteine proteinase inhibitors such as cystatin C. Elevation of cathepsin B levels in biological fluid has been observed in patients with inflammatory diseases and many cancers. We aimed to investigate the serum cathepsin B and cystatin C levels of CCA patients to evaluate the feasibility of using cathepsin B and cystatin C as markers for the diagnosis of CCA. Fifty-six sera from CCA patients, 17 with benign biliary diseases (BBD) and 13 from controls were collected and the cathepsin B and cystatin C levels were determined. In addition, cathepsin B expression was investigated immunohistochemically for 9 matched-pairs of cancerous and adjacent tissues of CCA patients. Serum cathepsin B, but not cystatin C, was significantly higher in CCA and BBD patient groups compared to that in the control group. Consistently, all cancerous tissues strongly expressed cathepsin B while adjacent tissues were negative in 7 out of 9 cases. In contrast, serum cystatin C levels were comparable between CCA and control groups, although serum cystatin C levels in the BBD group was higher than that in the control or CCA groups. When the serum cathepsin B to cystatin C ratio was calculated, that of the CCA group was significantly higher than that of the control group, and, although statistically not significant, the ratio of CCA group showed a trend to be higher than that of the BBD group. Thus, the cathepsin B to cystatin C ratio might be used as an alternative marker for aiding diagnosis of CCA.

Effect of Soil Properties on Leaching of Preservative Components from CCA-treated Wood (토양 특성이 CCA 처리재로부터 방부제 성분의 용탈에 미치는 영향)

  • Jeong, Yong Gi;Kim, Gyu-Hyeok
    • Journal of the Korean Wood Science and Technology
    • /
    • v.33 no.6 s.134
    • /
    • pp.87-94
    • /
    • 2005
  • This study was carried out to investigate the effect of soil types and soil properties on wood preservative leaching. Radiata pine (Pinus radiata Don.) sapwood stakes, which had been treated with 2.0%(w/v) CCA, were leached for 12 weeks by a common laboratory method in four different soils and for 14 days by the AWPA standard leaching method in water. The physical and chemical properties of the four soils were determined, and the percent leaching of the individual component of CCA was correlated with the various soil properties. The data show that leaching of preservative chemicals from treated wood exposed to soil is influenced by the type of soil. The preservative leaching was greater when wood was exposed to water than when the wood was in contact with water-saturated soil. The greatest chromium, copper and arsenic leaching from CCA-treated stakes were observed in the sandy loam, loam, and sand, respectively, and the least amount of leaching of CCA components occurred in the silty loam. The leaching of preservative components from treated wood is extremely complex and appears to be influenced differently by the soil properties. The extent of copper leaching from CCA treated wood appears to be related to exchangeable Mg and sum of bases. There is a reasonably good relationship between chromium leaching and exchangeable Mg, and between arsenic leaching and exchangeable K, soil Ni, Mn, Fe, Cr, or Cu content. Since this study was conducted based on laboratory leaching method using small cross-sectional dimensions; thus, data obtained from this experiment should not be used to predict leaching characteristics from commercial-size wood used in real situation. Accordingly, further studies are necessary using outdoor ground-contact leaching.

Decay Resistance and Effectiveness of CCA Preservative against Decay on the 4 Imported Softwoods (수입침엽수(輸入針葉樹) 4수종(樹種)의 내후성(耐朽性) 및 CCA계(系) 목재방부제(木材防腐劑) 처리(處理)에 따른 방부효과(防腐效果))

  • Lee, Jong Shin;Kim, Young Sik;Han, Kie Sun
    • Korean Journal of Agricultural Science
    • /
    • v.22 no.1
    • /
    • pp.42-48
    • /
    • 1995
  • With the aim to investigation of decay resistance and optimum concentration in chrome-copper-arsenic(CCA) preservative treatment on the imported softwoods from Siberia and North america, preservative absorption after CCA impregnation, weight losses and degradation patterns by decay fungi were examined. The density and latewood rate of Siberia softwoods(Spruce and Larch) were higher than those of North america softwoods(Douglas-fir and Western hemlock), resulting in the decrease of the CCA preservative absorption in the Siberia softwoods. In the case of untreated softwoods, decay resistance against Coriolus versicolor was lower than against Tyromyces palustris. For CCA treated softwoods, preservative effectiveness increased with increase in concentration of CCA solution. When treated with 0.7% CCA solution, efficiency value was more than 80 and 90 for C. versicolor and T. palustris, respectively. From this results, in the CCA preservative treatment for imported softwoods, it can be concluded that optimum concentration of CCA solution is approximately 0.7%. The absorption of CCA preservative distributed in the range of 3.8 and $5.5kg/m^3$. After exposure to testing fungi, in the untreated softwoods, bore holes formed in the cell walls and bordered pits, moreover, bordered pit canals enlarged by the fungi. However, 0.5% CCA treated softwoods was almost no deterioration in the cell walls and bordered pits due to decay.

  • PDF

Study on the Contrast Media Volume according to Scan Time during Brain Angiography Examination (Brain Angiography 검사 시 Scan Time에 따른 Contrast Media Volume에 대한 연구)

  • Lee, Ju Ryeon;Kim, Dong-Hyun
    • Journal of the Korean Society of Radiology
    • /
    • v.15 no.1
    • /
    • pp.29-35
    • /
    • 2021
  • The purpose of this study was to investigate whether there is a difference in image quality before and after reducing the amount of contrast medium in cerebral hemorrhagic patients who periodically follow up CT, and after reducing the amount of contrast medium, the image before and after reduction was examined, and the image quality was assessed by setting ROI at each vessel location using MMWP program. First Rt. CCA, Lt.CCA. Rt.MCA, Lt.MCA and Basilar Artery each got an ROI. Second, the mean and standard deviation values for the ROI were obtained. Third, SNR and CNR were obtained through the average and standard deviation values obtained. T-test statistics show that the SNR and CNR values obtained show that the result values for SNR are Rt.CCA 0.765, Ltd.CCA 0.871, Rt.MCA 0.343 LT.MCA 0.235, Basilar alternative 0.916, result value for CNR Rt.CCA 0.088, Ltd.CCA 0.069, Rt.MCA 0.818, Let's...MCA 0.579 and Basilar Artery 0.878. The results obtained through the obtained SNR and CNR values showed no difference in the quality of the images before and after reducing contrast medium. Therefore, we hope that this study will be an indicator that reduces the burden on contrast agents on patients who do CT examinations periodically.

The Performance Analysis of CCA Adaptive Equalization Algorithm for 16-QAM Signal (16-QAM 신호에 대한 CCA 적응 등화 알고리즘 성능 분석)

  • Lim, Seung-Gag
    • The Journal of the Institute of Internet, Broadcasting and Communication
    • /
    • v.13 no.1
    • /
    • pp.27-34
    • /
    • 2013
  • This paper deals with the performance anlysis of CCA adaptive equalization algorithm, that is used for reduction of intersymbol interference at the receiving side which occurs in the time dispersive communication channel. Basically, this algorithm is borned for the solving phase unrecovery problem in the CMA equalizer, and the comines the concept of DDA (Decision Directed Algorithm) and RCA (Reduce Constellation Algorithm). The DDA has a stable convergence characteristics in unilevel signal, but not in the number of levels in multilevel signal such as QAM, so it has unstable problem. The RCA does not provide reliable initial convergence. And even after convergence, the equalization noise due to the steady state misadjustment exhibited by it is very high as compared to DDA. For the solving the abovemensioned point, the CCA adaptive eualization alogorithm has borned. In order to performance analysis of CCA algorithm, the recovered signal constellation that is the output of the equalizer, the convergence characteristic by the residual isi and MD (maximum distortion), the SER characteristic are used by computer simulation and it was compared with the DDA, RCA respectively. As a result of simulation, the DDA has superior performance than other algoithm, but it has a convergence unguarantee and unstability in the multilevel signal. In order to solving this problem, the CCA has more good performance than RCA in every performance index.