• 대한화학회지
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• 제20권1호
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• pp.3-14
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• 1976

살리실알데히드-4-피페리디노티오세미카르바죤의 분잠 및 결정구조를 X-선 회절법으로 밝혔다. 이 화합물의 결정은 직각비등축정계에 속하며 공간군은 $P2_12_12_1$이다. 단위세포상수는 a = 6.52(2), b = 13.42(4), c = 14.92(4)${\AA}$으로서 4개 분자를 포함하고 있다. 원자의 좌표는 중원자법을 이용하여 결정하였고 최소자승법으로 정밀화하였다. 1019개의 구조인자에 대한 최종 R값은 0.10이다. 티오세미카르바죤 화합물에서 C=S결합은 N-NH 결합에 대해 트랜스 위치에 존재하는 경우가 많은데 살리실알데히드-4-피페리디노티오세미카르바죤에서는 시스위치에 있다. 히드록실기의 산소원자는 O-H${\cdots}$O의 분자내수소결합과 N-H${\cdots}$O의 분자간수소결합에 참여하는데 그 수소결합길이는 각각 2.56${\AA}$과 3.00${\AA}$이다. 분자간에는 N-H${\cdot}{\cdot}{\cdot}$O 수소결합에 의하여 a축에 평행한 나선축을 따라 나선형 분자띠를 이루고 있으며 이들 분자띠는 반데르왈스힘으로 결합되어 있다.

• Bulletin of the Korean Chemical Society
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• 제7권5호
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• pp.331-334
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• 1986

The crystal structure of thiamin tetrahydrofurfuryl disulfide, one of the ring-opened derivatives of thiamin, has been determined by the X-ray diffraction methods. The crystal is monoclinic with cell dimensions of a = 8.704 (1), b = 11.207 (2), c = 21.260 (3) ${\AA}$ and ${\beta}$ = 92.44 (2)$^{circ}$, space group P2$_{1}$/c and Z = 4. The structure was solved by direct methods and refined to R = 0.076 for 1252 observed reflections measured on a diffractometer. The molecule assumes a folded conformation in which the pyrimidine and the tetrahydrofurfuryl rings are on the same side of the ethylenic plane. The pyrimidinyl, N-formyl and ethylenic planes are mutually perpendicular to each other and the N(3)-C(4) bond retains a single bond character. The structure is stabilized by an intramolecular N(4'${\alpha})-H{\cdots}O(2{\alpha}$) hydrogen bond. The molecules are connected via N(4'${\alpha}$)-H{\cdots}(N3')$ and O(5${\gamma})-H{\cdots}(N1')$ hydrogen bonds, forming a two-dimensional hydrogen-bonding network. The tetrahydrofurfuryl ring is dynamically disordered. The overall conformation as well as the packing mode is very similar to that of thiamin propyl disulfide.

• 대한화학회지
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• 제18권5호
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• pp.329-340
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• 1974

X-선 회절법을 이용하여 sulfadiazine, $C_{10}H_{10}N_4O_2S$, 의 결정 및 분자 구조를 규명하였다. Acetone 과 ethanol의 혼합용액으로 부터 얻은 결정은 일사축계에 속하며, 단위세포에는 4분자가 있고, 공간군은 P21/c이다. 단위세포 상수는 $a=13.71{\pm}0.04,\;b=5.84{\pm}0.03,\;c=15.11{\pm}0.05{\AA},\;{\beta}=115.0{\pm}0.3^{\circ}$이다. 결정구조는 3차원적인 와이센버그사진으로 부터 얻어진 실험치를 이용하여 패터슨합성과 프리에합성을 하고 이를 해석하여 밝혀냈다. 수소원자를 제외한 원자들의 좌표치는 최소자승법으로 정밀화 하였으며, 최종 R값은 관측된 1517개의 독립반사에 대하여 0.15이다. 벤젠고리와 피리미딘고리의 두 평면이 이루는 각은 $76^{\circ}$이고, S-N(1)결합을 중심으로 한 N(1)-C(1) 결합과 S-C(5)결합이 이루는 conformational angle은 $77^{\circ}$로서 gauche형을 하고 있다. 이미노기의 질소원자, N(1)은 대칭중심에 의하여 옮겨지는 다른 분자의 피리미딘고리의 질소원자, N(3)와 $N-H{\cdots}N$형의 수소결합을 이루고 있으며, 아미노기의 질소원자, N(4)는 b축의 거리만큼 떨어져 있는 다른분자의 산소원자, O(1) 및 O(2)와 두개의 $N-H{\cdots}O$형 수소결합을 이루고 있다. 이들 수소결합의 2차원적 그물은 (100)면에 평행한 무한한 분자층을 형성하며 인접분자층 사이에는 van der Waals의 힘에 의하여 결합되어 있다

• 대한화학회지
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• 제20권1호
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• pp.19-34
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• 1976

Sodium sulfisoxazole hexahydrate, $C_{11}H_{12}N_3O_3SNa{\cdot}6H_2O$의 결정 및 분자구조를 X-선 회절법으로 해명하였다. 이 화합물의 결정은 공간군 $P2_1/c$에 속하는 단사형으로 a = 15.68(3), b = 7.70(2), c = $17.94(4){\AA}$, ${\beta}$ = $118(2)^{\circ}$ and Z = 4이다. Weissenberg 사진 촬영으로 얻은 회절반점의 총수는 1717개이며 중원자법을 적용하여 구조해명을 한 후 최소 자승법으로 정밀화하였으며 최종 R값은 0.14이다. Benzene ring과 isoxazole ring은 평면구조를 가지며 서로 $60^{\circ}$의 각을 이루고 있다. 나트륨 원자는 다섯개의 물의 산소 원자들과 N(1)으로 만들어진 찌그러진 팔면체로 배위되어 있다. 분자들은 결정내에서 14개의 서로 다른 종류의 수소결합으로 결합되어 있다. 여섯종류의 $O-H{\cdots}O-H$, 세종류의 $O-H{\cdots}O,$ 두종류의 $O-H{\cdots}N$및 각각 한종류의 $N-H{\cdots}O,$ $O-H{\cdots}N$, $N-H{\cdots}O-H$ 수소결합들이며 그 길이는 2.71에서 $3.04{\AA}$까지이다.

• 대한화학회지
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• 제57권4호
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• pp.447-454
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• 2013

In this research, two new complexes of N-(2-aminoethyl)-1,3-propanediamine (aepn), $[Cd(aepn)_2]I_2$ (1) and $[Cd(aepn)_2]Cl_2{\cdots}H_2O$ (2), were prepared and identified by elemental analysis, FT-IR, Raman spectroscopy and single-crystal X-ray diffraction. Geometry around the cadmium atom in two complexes by coordination of six nitrogen atoms of two aepn is distorted octahedral. If distortion in the mer-$[Cd(aepn)_2]^{2+}$ cation is disregarded, it has a $C_2$ axis and $C_2$ symmetry. The cyclic voltammetry experiments were carried out to study the complexation process. Two structural surveys on coordination modes and complexes of aepn are presented. A study was carried out using CSD data to estimate the averages of bond lengths for different types of the Cd-N bonds. It was found that the intermolecular $N-H{\cdots}I$, $C-H{\cdots}I$ hydrogen bonds in 1 and $N-H{\cdots}Cl$, $N-H{\cdots}O$, $C-H{\cdots}O$, $O-H{\cdots}Cl$ in 2 stabilized the crystal networks.

• Journal of Pharmaceutical Investigation
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• 제18권4호
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• pp.209-215
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• 1988

The three-dimensional structures of piroxicam crystallized from two different solvents, toluene and toluene/hexane mixture respectively, are proved identical: $C_{15}H_{13}N_3O_4S,\;M\;=\;331.35$, monoclinic, a = 7.128(1), b = 15.146(2), c = 13.956(2) ${\AA},\;{\beta}=\;97.33(1)^{\circ},\;V\;=\;1494.37{\AA}^{3},\;Dx\;=\;1.472\;g/cm^{3},\;Z\;=\;4,\;space\;group\;P2_{1}/c,\;Mo\;K{\alpha}(\lambda=\;0.71073\;{\AA})$, F(000) = 688, T = 295 K, R = 0.0611 for 1993 unique observed reflections. The thiazine ring exhibits a half chair conformation. An amide group is involved in an intramolecular hydrogen bond to the hydroxy group, O(17)-H(17)${\cdots}O(15){\AA}$. The molecule is planar within 2 ${\AA}$ with the interplanar angle $127.9(4)^{\circ}$ between pyridine and benzene rings. A molecular chain parallel to [011] is formed by two intermolecular hydrogen bonds N(16)-H(6)${\cdots}O(11)$ and C(6)-H(6)${\cdots}O(11)$, and the molecular chains are held together by van der Waals forces.

• Bulletin of the Korean Chemical Society
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• 제32권1호
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• pp.325-328
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• 2011

• Archives of Pharmacal Research
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• 제14권2호
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• pp.137-142
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• 1991

The structure of a $\beta$-allyl type phenylpropanoid was determined by single crystal X-ray diffraction analysis. The compound was recrystallized from a mixture of n-hexane and benzene in monoclinic crystal system with a = 24.782 (2), b = 10.537 (1), c = 7.871 (1) ${\AA}, \beta=95.74$ (1)$^\circ, $D_x$=1.216, $D_m$=1.22g/$cm^3$, space group $P2_1/a$, and Z=4. The structure was solved by direct method and refined by least-squares procedure to the final R value of 0.054 for 2824 observed reflections {$F{\geq}3\sigma(F)$}. The molecular geometry shows a most stable trans-form with respect to the bulky phenyls, and this conformation is settled by an intramolecular hydrogen bond. In the crystal, the molecules are arranged along with the screw axis, and stabilized by the $O{\cdot}H{\cdots}O$ type intermolecular hydrogen bonds. The other intermolecular contacts appear to be the normal van der Waals' interactions. The compound is a dimeric phenylpropanoid, and belongs to the neolignan analogues.

• 대한화학회지
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• 제7권4호
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• pp.293-298
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• 1963

The crystal structure of ethylenediamine dihydrochloride has been determined by the two-dimensional Patterson methods and refined by two-dimensional Fourier syntheses. The unit cell dimensions are a = 4.44${\pm}$0.02, b = 6.88${\pm}$0.02, c = 9.97${\pm}$0.02 ${\AA}$, ${\beta}$ = 92${\pm}$$1^{\circ}$. The space group is $P2_1_{/c}$. The carbon and nitrogen atoms in the ethylenediamine itself lie on one plane and its structure has a trans-form with a centre of symmetry in it, and C-C distance of 1.54 ${\AA}$, C-N distance of 1.48${\AA}$ and C-C-N bond angle of $109.07^{\circ}$. The molecules are linked by N-H${\cdots}$Cl hydrogen bonds with distance of 3.14, 3.16 and 3.22 ${\AA}$ forming three dimensional network. The values of reliability factor for F(okl), F(hol) and F(hko) are 0.11, 0.10 and 0.09 respectively.

• Bulletin of the Korean Chemical Society
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• 제14권6호
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• pp.713-717
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• 1993

The crystal structure of the potassium salt of penicillin V has been studied by the X-ray crystallographic methods. Crystal data are as follows; potassium 3,3-dimethyl-7-oxo-6-phenoxyacetoamido-4-thia-1- azabicyclo[3.2.0]-heptane-2${\alpha}$-carboxylate, $K^+{\cdot}C_{16}H_{18}N_2O_5S^-$, $M_r$= 388.5, triclinic, Pl, a= 9.371 (1), b= 12.497 (2), c= 15.313 (2) ${\AA},\;{\alpha}= 93.74\;(2),\;{\beta}=99.32\;(1),\;{\gamma}=90.17\;(1)^{\circ},\;V=1765.7\;(2)\;{\AA}^3$, Z=4, $D_m=1.461\;gcm^{-1},\;{\lambda}(Cu\;K{\alpha})=1.5418\;{\AA},\;{\mu}=40.1\;cm^{-1}$, F(000)=808, T=296 K. The structure was solved by the heavy atom and difference Fourier methods with intensity data measured on an automated four-circle diffractometer. The structure was refined by the full-matrix least-squares method to a final R= 0.081 for 3563 observed $[I_0{\geq}2{\sigam}(I_0)]$ reflections. The four independent molecules assume different overall conformations with systematically different orientations of the phenyl groups although the penam moieties have the same closed conformations. There are intramolecular hydrogen bonds between the exocyclic amide nitrogen and phenoxy oxygen atoms. The penam moiety is conformationally very restricted although the carboxyl and exocyclic amide groups apparently have certain rotational degrees of freedom but the phenyl group is flexible about the ether bond despite the presence of the intramolecular N-H${\cdots}$O hydrogen bond. There are complicated pseudo symmetric relationships in the crystal lattice. The penam moieties are related by pseudo 20.5 screw axes and the phenyl groups by pseudo centers of symmetry. The potassium ions, related by both pseudo symmetries, form an infinite zigzag planar chain parallel to the b axis. Each potassium ion is coordinated to seven oxygen atoms in a severely distorted pentagonal bipyramid configuration, forming the infinite hydrophilic channels which in turn form the molecular stacks. Between these stacks, there are only lipophilic interactions involving the phenyl groups.