• 한국환경복원기술학회지
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• 제18권2호
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• pp.33-44
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• 2015

This study was performed to propose the site selection plan for the restoration of the target Narrow-mouth Frog(Kaloula borealis) habitat, and has developed the AHP model to select the optimal site for narrow-mouth frog habitat restoration on the basis of the narrow-mouth frog Habitat Suitability Index (HSI) items (factors and variables). The assessment areas were established by the narrow-mouth frog HSI factors such as space, feed, cover, water(breeding), threatening factors and others, and the sub-assessment items by each assessment area were established based on the narrow-mouth frog HSI variables. The weighting values of the assessment areas and items were calculated by the developed AHP method. The weighting values of the 5 assessment areas were arranged in order as cover(0.283), water(breeding)(0.276), feed(0.230), space(0.147), and threatening factor(0.064). The final weighting values of the 14 assessment items were arranged in order of height as low-rise grassland(0.190), soil quality(0.178), and stones and between the stones(0.105). The scoring criteria according to the assessment items and factors were marked and applied by equal intervals considering the criteria by HSI items of the narrow-mouth frog and finally the scoring criteria diagram has been proposed for the optimal site selection of the narrow-mouth frog habitat restoration.

• 한국환경복원기술학회지
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• 제18권3호
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• pp.109-118
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• 2015

This study was performed to propose the site selection plan for the restoration of the target Reeve's turtle (Maunemys reevesii) habitat and has developed the AHP model to select the optimal site for Reeve's turtle habitat restoration on the basis of the Reeve's turtle Habitat Suitability Index (HSI) items (factors and variables). The assessment areas were established by the Reeve's turtle HSI factors such as breeding space, feed, cover, water, threatening factors and others and the sub-assessment items by each assessment area were established based on the Reeve's turtle HSI variables. The weighting values of the assessment areas and items were calculated by the developed AHP method. The weighting values of the 5 assessment areas were arranged in order as breeding space(0.293), food(0.273), water(0.217), cover(0.113), and threatening factor(0.104). The final weighting values of the 17 assessment items were arranged in order of height as all kind of food(0.222), water depth(0.096), altitude of spawning ground(0.093). The scoring criteria according to the assessment items and factors were marked and applied by equal intervals considering the criteria by HSI items of the Reeve's turtle and finally the scoring criteria diagram as been proposed for the optimal site selection of the Reeve's turtle habitat restoration.

• 한국작물학회지
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• 제61권1호
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• pp.64-69
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• 2016

This study was conducted to develop a fast and efficient screening method to determine the quantity of fatty acid in peanut oil for high oleate breeding program. A total of 329 peanut samples were used in this study, 227 of which were considered in the calibration equation development and 102 were utilized for validation, using near infrared reflectance spectroscopy (NIRS). The NIRS equations for all the seven fatty acids had low standard error of calibration (SEC) values, while high R2 values of 0.983 and 0.991 were obtained for oleic and linoleic acids, respectively in the calibration equation. Furthermore, the predicted means of the two main fatty acids in the calibration equation were very similar to the means based on gas chromatography (GC) analysis, ranging from 36.7 to 77.1% for oleic acid and 7.1 to 42.7% for linoleic acid. Based on the standard error of prediction (SEP), bias values, and $R^2$ statistics, the NIRS fatty acid equations were accurately predicted the concentrations of oleic and linoleic acids of the validation sample set. These results suggest that NIRS equations of oleic and linoleic acid can be used as a rapid mass screening method for fatty acid content analysis in peanut breeding program.

• Reproductive and Developmental Biology
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• 제35권3호
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• pp.247-250
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• 2011

본 연구는 국립축산과학원에서 조성한 대요크샤종 및 랜드레이스종 근교계통돈 86두에 대해 산지수에 관여하는 유전자로 알려진 PRLR3, FSR, RBP4 후보유전자 3종의 유전적 다형성을 분석하여 이들 후보유전자와 총산자수의 표현형 및 육종가 간의 연관성을 검증함으로써 경제형질과 관련된 유용표지인자 활용 방법을 개발하고자 수행하여 유전적 다형성을 확인하였다. 대요크샤종에서는 PRLR3, RBP4 후보유전자의 AA형 유전자 빈도가 낮게 나타났으나 이들 모두 다형성을 보였고, 이중 PRLR3 후 보유전자는 B대립유전자가 유의적인(p<0.05) 연관성을 가지고 있었으며, RBP4 후보유전자 역시 유의적인 차이는 없었지만 B대립유전자가 연관성을 가지고 있는 것으로 추정되었다. 랜드레이스종에서 PRLR과 FSR 후보유전자는 다형성이 나타나지 않았으며, RBP4 후보유전자에서 BB형 유전자 빈도가 낮게 나타났으나 다형성을 보였고, 유의적인 차이는 없었으나 A대립유전자가 총산지수의 표현형 및 육종가와 연관성을 가지고 있는 것으로 추정되었다. 본 연구 결과를 활용하여 유의적인 후보종돈을 선발할 경우 번식 능력의 향상에 효과적일 것으로 판단된다.

• 한국산림과학회지
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• 제88권3호
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• pp.379-388
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• 1999

우리 나라에 적용할 산림용 종자 산지구분(塵地區分)의 첫 단계로 임목집단의 유전생태적 분화에 영향이 큰 연평균 온도, 극한 최저온도, 생육기간중 상대습도, 일조량, 건조지수 등 기상인자를 척도로 수평적 산지를 구분하였다. 적용한 산지구분의 개념은 전형적인 산지구분 형태인 수종별 구분법보다는 전 수종을 포함한 생태지역 개념의 산지구분법에 따랐다. 산림대를 대구분 단위로 하여 산림대별(난대, 온대남부, 온대중부, 온대북부)로 기본구역을 설정하여 유집분석을 근거로 난대 3, 온대남부 6, 온대중부 8, 온대북부 2로 총 19개의 수평적 산지로 구분하였다. 적용한 6개의 척도중 연평균 온도, 극한 최저온도, 생장일수는 산림대별로 난대에서 온대북부 방향으로 일정한 경향을 보였으며 상대습도, 일조량 및 건조지수에서는 일정한 경향을 보이지는 않았으나 산지간에는 많은 차이를 보여 이들 인자는 미세 환경인자에 민감한 것으로 나타났다. 본 연구에 의해 구분된 산지는 구획 초기단계로 잠정적인 산지로 활용하면서 금후 생물기후도, 산지시험, 유전생태 자료 등이 축적되면 보완해 나갈 것이다.

• Journal of the Korean Data and Information Science Society
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• 제26권6호
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• pp.1249-1258
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• 2015

젖소의 유생산 형질에 가장 큰 영향을 미치는 유전자들 중 하나로 알려진 DGAT1 유전자의 효과를 국내 젖소 종축의 고밀도 유전체 정보를 이용하여 검증하기 위하여 본 연구를 수행하였다. 국내 젖소 씨수소로 구성된 353두의 고밀도 유전체 정보, 혈통, 추정 육종가 및 신뢰도 정보를 수집하였으며, 단일염기다형성 효과를 추정하기 위한 종속변량으로 가장 정확한 유전체 육종가를 예측할 수 있는 DeRegressed EBV를 산출하여 분석에 이용하였다. BovineSNP50 v2 패널을 이용하여 구명한 고밀도 유전자형 정보 중 유효성검증 과정을 통하여 41,051개 SNP을 선정하였으며, 각 단일 염기다형성의 실제적 유전체 육종가 기여도를 확인하기 위하여 유전체 선발방법 중 하나인 베이즈B (pi=0.99) 방법을 이용하여 SNP 효과를 추정하였다. 1메가 베이스페어의 구간으로 구성된 유전체 전장의 2,516개 윈도우 별 유전분산 설명력을 계산한 결과 상위 1, 3 윈도우가 DGAT1유전자 주변에서 발견되었으며, 이 두 윈도우의 유전분산 설명력은 각각 0.51% 및 0.48%인 것으로 나타났다. DGAT1유전자는 유전체 선발에 상업적으로 이용되는 50k SNP chip에 포함되어있지 않기 때문에 직접적인 유전자의 효과가 명확하게 드러나지는 않지만 DGAT1 유전자에 인접한 단일염기다형성들간의 연관불평형에 의하여 주변 윈도우에서 가장 높은 유전분산 설명력을 보이는 것으로 사료된다.

• 한국육종학회지
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• 제40권3호
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• pp.263-268
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• 2008

잣나무 채종원의 유전간벌을 위하여 재적생장에 대한 개량 효과와 유효클론수를 이용한 유전다양성을 평가하였다. 유전 간벌은 클론의 일반조합능력으로 나타나는 육종가(breeding value), 암꽃과 수꽃 개화량을 이용한 종자생산 기여도, 클론별 ramet수 등를 이용한 클론별 변이를 기초로 하였다. 차대 검정 결과에 의하여 산출된 재적생장에 대한 클론별 일반조합능력(genetic value) 및 1991년부터 2003년까지 조사된 개화량 성적을 이용하여 잣나무 채종원(1981년 조성) 179클론에 대하여 간벌 강도에 따른 유전다양성 및 개량효과를 분석하였다. 이때 채종원 외부로부터의 화분오염율은 30%(gene migration = 15%)로 설정하였다. 그 결과 재적생장에 대한 개량효과는 간벌율이 10%에서 60%까지 높아짐에 따라서 점차 증가하였다. 하지만 이보다 더 높은 간벌 강도에서 현저한 개량효과 증가는 나타나지 않았다. 유효클론수는 간벌강도 10%에서 60% 사이에서는 40클론으로 나타났으며, 70% 간벌율 이상에서는 증가하거나 감소하는 변동을 나타냈다. 따라서 본 잣나무 채종원에 대해서는 50%에서 60% 수준의 간벌 강도가 적당한 것으로 판단된다.

• Animal Bioscience
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• 제36권1호
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• pp.10-18
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• 2023

Objective: In this study, we aimed to position the Hungarian Merino among other Merinoderived sheep breeds, explore the characteristics of our sampled animals' genetic similarity network within the breed, and highlight single nucleotide polymorphisms (SNPs) associated with daily weight-gain. Methods: Hungarian Merino (n = 138) was genotyped on Ovine SNP50 Bead Chip (Illumina, San Diego, CA, USA) and positioned among 30 Merino and Merino-derived breeds (n = 555). Population characteristics were obtained via PLINK, SVS, Admixture, and Treemix software, within-breed network was analysed with python networkx 2.3 library. Daily weight gain of Hungarian Merino was standardised to 60 days and was collected from the database of the Association of Hungarian Sheep and Goat Breeders. For the identification of loci associated with daily weight gain, a multi-locus mixed-model was used. Results: Supporting the breed's written history, the closest breeds to Hungarian Merino were Estremadura and Rambouillet (pairwise F_ST values are 0.035 and 0.036, respectively). Among Hungarian Merino, a highly centralised connectedness has been revealed by network analysis of pairwise values of identity-by-state, where the animal in the central node had a betweenness centrality value equal to 0.936. Probing of daily weight gain against the SNP data of Hungarian Merinos revealed five associated loci. Two of them, OAR8_17854216.1 and s42441.1 on chromosome 8 and 9 (-log₁₀P>22, false discovery rate<5.5e-20) and one locus on chromosome 20, s28948.1 (-log₁₀P = 13.46, false discovery rate = 4.1e-11), were close to the markers reported in other breeds concerning daily weight gain, six-month weight, and post-weaning gain. Conclusion: The position of Hungarian Merino among other Merino breeds has been determined. We have described the similarity network of the individuals to be applied in breeding practices and highlighted several markers useful for elevating the daily weight gain of Hungarian Merino.

• Asian-Australasian Journal of Animal Sciences
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• 제29권8호
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• pp.1083-1094
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• 2016

Carcass and price traits of 72,969 Hanwoo cows, bulls and steers aged 16 to 80 months at slaughter collected from 2002 to 2013 at 75 beef packing plants in Korea were analyzed to determine heritability, correlation and breeding value using the Multi-Trait restricted maximum likelihood (REML) animal model procedure. The traits included carcass measurements, scores and grades at 24 h postmortem and bid prices at auction. Relatively high heritability was found for maturity ($0.41{\pm}0.031$), while moderate heritability estimates were obtained for backfat thickness ($0.20{\pm}0.018$), longissimus muscle (LM) area ($0.23{\pm}0.020$), carcass weight ($0.28{\pm}0.019$), yield index ($0.20{\pm}0.018$), yield grade ($0.16{\pm}0.017$), marbling ($0.28{\pm}0.021$), texture ($0.14{\pm}0.016$), quality grade ($0.26{\pm}0.016$) and price/kg ($0.24{\pm}0.025$). Relatively low heritability estimates were observed for meat color ($0.06{\pm}0.013$) and fat color ($0.06{\pm}0.012$). Heritability estimates for most traits were lower than those in the literature. Genetic correlations of carcass measurements with characteristic scores or quality grade of carcass ranged from -0.27 to +0.21. Genetic correlations of yield grade with backfat thickness, LM area and carcass weight were 0.91, -0.43, and -0.09, respectively. Genetic correlations of quality grade with scores of marbling, meat color, fat color and texture were -0.99, 0.48, 0.47, and 0.98, respectively. Genetic correlations of price/kg with LM area, carcass weight, marbling, meat color, texture and maturity were 0.57, 0.64, 0.76, -0.41, -0.79, and -0.42, respectively. Genetic correlations of carcass price with LM area, carcass weight, marbling and texture were 0.61, 0.57, 0.64, and -0.73, respectively, with standard errors ranging from ${\pm}0.047$ to ${\pm}0.058$. The mean carcass weight breeding values increased by more than 8 kg, whereas the mean marbling scores decreased by approximately 0.2 from 2000 through 2009. Overall, the results suggest that genetic improvement of productivity and carcass quality could be obtained under the national scale breeding scheme of Korea for Hanwoo and that continuous efforts to improve the breeding scheme should be made to increase genetic progress.

• 한국작물학회:학술대회논문집
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• 한국작물학회 2017년도 9th Asian Crop Science Association conference
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• pp.73-73
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• 2017

To set an optimal harvest time of main 7 whole crop silage rice cultivars, Nokyang(Ny), Mogwoo(Mw), Mogyang(My), Jungmo1029(Jm1029), Jungmo1038(Jm1038), Nokwoo(Nw) and Yeongwoo(Yw), based on feed value, we analyzed their feed values such as percent crude protein(CP), crude fat(CF), crude ash(CA), neutral detergent fiber(NDF), acid detergent fiber(ADF) and lignin. It was evaluated every 10 days from heading to 40 days after heading(DAH). Total digestible nutrient(TDN) and relative feed value(RFV) was also calculated from ADF and NDF. As results, CP was generally in decline as increasing DAH in Ny, My, Jm1029, Jm1038 and Yw and decreased to 20 DAH in Mw, decreased after increasing to 30 days in Nw. The CP content of Ny was relatively the highest ranged from 5.3% to 10.1% and Mw the lowest 4.5% to 5.2%, compared to others. CF content tend to decrease as DAH increase in Ny, My and Nw and decreased after increasing to 30 days Jm1029, increased after decreasing to 20 days Jm1038 but was not shown distinct trend of increase or decrease in Mw. Especially, that of Yw's CF gradually increased as harvest time late but relative content the lowest from 1.46% to 2.29% among 7 cultivars. The CA content of Ny, My, Jm1029 and Jm1038 approximately decreased as DAH increased and that of Mw was similar to others after heading, Nw decreased after 10 days and Yw increased after flowering. In all 7 cultivars, NDF and ADF had a tendency to decrease as days accumulated, in particular, Yw was the lowest on 30 DAH and so the content of Yw's TDN the highest(71.5%), while the lowest(67.2%) in Nw. For lignin, particularly, Mw tend to be in decline as DAH increase and was the lowest ranged from 1.34% to 1.87%. ADF analyses allows for the evaluation of in vivo digestible dry matter(DDM) and energy availability and NDF analyses provides the best indication of dry matter intake(DMI). Ultimately, the two factors can be combined to derive RFV for forage. RFV in general increased as DAH increased in all cultivars and was in order, Yw>My>Ny> Jm1038>Mw>Jm1029>Nw on 30 DAH. Taken together when these results, despite a slight increase of TDN after 30 DAH except Yw, considering forage yield potential, digestibility of grains and gradual decrease of CP and CF, the yellow ripe stage, about 30 DAH, was appropriate to harvest whole crop rice for silage use.