• 한국물환경학회지
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• 제28권4호
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• pp.512-522
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• 2012

This study is focused on fish fauna and distributional features along with physical gradients and stream orders in the Tamjin River basin, Korea. Fish sampling and investigation were conducted for 2 years from 2009 to 2010. Total number of fish species collected were 47 species of 16 family. The group of cyprinidae was mostly abundant. Both fish abundance and biotic index were declined with increasing altitude and longitudinal distance from the river mouth. Two species of Zacco temminckii and Pungtungia herzi were prevalent in most of sampling sites and showed no altitudinal and longitudinal differences. Most other species, however, were spatially restricted to specific regional altitudes. Several species including Zacco platypus, Squalidus gracilis majimae and P. herzi were broadly distributed from river mouth to 50 km. Eight species including Z. temminckii and Rhynchocypris oxycephalus only appeared in over 10 km from the river mouth. Both Odontobutis platycephala and Pseudobagrus koreanus were classified as "upstream dewelling species" observed only in over 30 km from the river mouth. High proportion of tolerant and omnivorous species were more dominated in the downstream zone of the dam, whereas intolerant and insectivorous species were abundant in the upstream zone of the dam. The variable of stream order showed positive relationship between number of fish species and total individuals collected. Sensitive species including insectivore had a declining tendency with increasing stream order, while tolerant specie including omnivore species had relatively increased with stream order. Overall, our study suggested that fish distribution considerably depends on altitudinal gradient and longitudinal distance from the river mouth as well as physical habitat.

• The Plant Pathology Journal
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• 제35권6호
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• pp.553-563
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• 2019

Investigations related with factors influencing root and crown rot are rare and mainly related to farming practice and soil management. The main objective of this study was to examine broader range of factors influencing stem-base infestation of winter wheat in the field conditions. The effect of spatial distribution of infected plants on disease index (DIs) assessments was also investigated. Analysis of factors influencing DIs of crown rot of wheat demonstrated significant influence of the growing seasons (P < 0.001) and extreme fluctuations in winter temperatures (P < 0.001). In addition to that, localities together with their interaction with the growing season also significantly influenced DIs (P < 0.001). Aggregation of infected plants influenced variability of DI estimations, and it was pointed out that more extensive investigation should be conducted on broad range of DI in order to establish sampling method giving uniform sampling precision. Fusarium graminearum was shown to be predominant Fusarium species in Serbia (72.6%) using sequence-characterized amplified region analysis. Interestingly F. oxysporum was isolated in higher frequencies (27.4%) than it was reported in the literature. Given that there were no reports on the diversity of Fusarium species causing crown rot of wheat in Serbia, this study presents first report on this important subject. It also indicated that more attention should be focused on combined effects of abiotic and biotic factors influencing stem-base infestation of winter wheat. This knowledge will contribute to better understanding of factors influencing root and crown rot of wheat which would ensure sustainable disease management in the future.

• 한국물환경학회지
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• 제21권4호
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• pp.368-378
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• 2005

Inorganic matters originated from stone quarries and manufacturing plants could alter the ecological characteristics of adjacent aquatic systems, especially the structure and function of benthic macroinvertebrate community. In such situation, the locality of stone quarry and the quantity of inorganic matters would be important factors that determined the disturbing strength to the benthic macroinvertebrate community. Locality patterns of stone quarries were classified into 3 types in relation to the stream ecosystem; stream-proximity, upstream-inclusion and tributary-inclusion type. In the result of species:abundance analysis, stone quarry B (upstream-inclusion type) showed geometric distribution, while others showed broken-stick distribution pattern. The benthic macroinvertebrate communities closer to stone quarries showed smaller species numbers and standing crops among all types of stone quarries. However the values of species evenness index were not seriously different between controls and directly affected sites. These results indicated that the effect of inorganic disturbance would differ from those of organic pollution that induced the highly dominant state occupied by tolerant species. Number of occurred species, standing crops, community indices and biotic indices indicated that the community of upstream-inclusion type was the most seriously damaged from the inorganic disturbance, and the community would be very simple and unstable. Tributary-inclusion stone quarry heavily damaged to tributary system in biologically, but influence to the main stream seemed to be depended on the scale of main stream. Among 3 types of stone quarry localities, stream-proximity type induced the least damages to benthic macroinvertebrate community, though the degrees of damage were different along with distances between stream and stone quarry.

• Journal of Ecology and Environment
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• 제38권1호
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• pp.95-107
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• 2015

Because an ecological community consists of diverse species that vary nonlinearly with environmental variability, its dynamics are complex and difficult to analyze. To investigate temporal variations of benthic macroinvertebrate community, we used the community data that were collected at the sampling site in Baenae Stream near Busan, Korea, which is a clean stream with minimum pollution, from July 2006 to July 2013. First, we used a self-organizing map (SOM) to heuristically derive the states that characterizes the biotic condition of the benthic macroinvertebrate communities in forms of time series data. Next, we applied the hidden Markov model (HMM) to fine-tune the states objectively and to obtain the transition probabilities between the states and the emission probabilities that show the connection of the states with observable events such as the number of species, the diversity measured by Shannon entropy, and the biological water quality index (BMWP). While the number of species apparently addressed the state of the community, the diversity reflected the state changes after the HMM training along with seasonal variations in cyclic manners. The BMWP showed clear characterization of events that correspond to the different states based on the emission probabilities. The environmental factors such as temperature and precipitation also indicated the seasonal and cyclic changes according to the HMM. Though the usage of the HMM alone can guarantee the convergence of the training or the precision of the derived states based on field data in this study, the derivation of the states by the SOM that followed the fine-tuning by the HMM well elucidated the states of the community and could serve as an alternative reference system to reveal the ecological structures in stream communities.

• 한국환경과학회지
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• 제24권6호
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• pp.731-741
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• 2015

The objectives of study were to evaluate fish species compositions of trophic guilds and tolerance guilds and apply ecological fish assessment (EFA) models to Bekjae Weir, Keum-River Watershed. The EFA models were Stream Index of Biological Integrity (SIBI) used frequently for running water and Lentic Ecosystem Health Assessment (LEHA) used for assessments of stagnant water. The region of Bekjae Weir as a "four major river project" was originally a lotic ecosystem before the weir construction (2010, $B_{WC}$) but became more like lentic-lotic hybrid system after the construction (2011, $A_{WC}$). In the analysis of species composition and ecological bioindicator (fish), fish species with a preference of running water showed significant decreases (p < 0.05), whereas the species with a preference of stagnant water showed significant increases (p < 0.05). After the weir construction, relative abundances of tolerant species increased, and the proportion of insectivores decreased. This phenomenon indicated the changes of biotic compositions in the system by the weir construction. Applications of SIBI and LEHA models to the system showed that the two model values decreased at the same time after the weir construction ($A_{WC}$), and the region became more like lentic-lotic hybrid system, indicating the degradation of ecosystem health. The model values of SIBI were 19 and 16, respectively, in the BWC and AWC, and the health conditions were both "C-rank". In the mean time, the LEHA model analysis showed that the values was 28 in the BWC and 24 in the AWC, thus the health was turned to be "B-Rank" in the BWC and "C-Rank" in the AWC. indicating a degradation of ecological heath after the weir construction.

• Mycobiology
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• 제49권4호
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• pp.385-395
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• 2021

Fungal endophytes have been recorded in various plant species with a richness of diversity, and their presence plays an essential role in host plant protection against biotic and abiotic stresses. This study applied the Illumina MiSeq sequencing platform based on the amplification of fungal ribosomal ITS2 region to analyze fungal endophytic communities of two oak species (Quercus mongolica and Q. serrata) with different oak wilt disease susceptibilities in Korea. The results showed a total of 230,768 sequencing reads were obtained and clustered at a 97% similarity threshold into 709 operational taxonomic units (OTUs). The OTUs of Q. serrata were higher than that of Q. mongolica with the number of 617 OTUs and 512 OTUs, respectively. Shannon index also showed that Q. serrata had a significantly higher level of fungal diversity than Q. mongolica. Total of OTUs were assigned into 5 fungal phyla, 17 classes, 60 orders, 133 families, 195 genera, and 280 species. Ascomycota was the dominant phylum with 75.11% relative abundance, followed by Basidiomycota with 5.28%. Leptosillia, Aureobasidium and Acanthostigma were the most abundant genera detected in Q. serrata with the average relative abundance of 2.85, 2.76, and 2.19%, respectively. On the other hand, Peltaster, Cladosporium and Monochaetia were the most common genera detected in Q. mongolica with the average relative abundance of 4.83, 3.03, and 2.87%, respectively. Our results indicated that fungal endophytic communities were significantly different between two oak species and these differences could influence responses of host trees to oak wilt disease caused by Raffaelea quercus-mongolicae.

• 한국자원식물학회:학술대회논문집
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• 한국자원식물학회 2020년도 춘계학술대회
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• pp.46-46
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• 2020

Finger millet is more nutritious than other and millets and widely cultivate in tropical regions of the world. Furthermore, it is more tolerant against biotic and abiotic stresses such as pest, drought and salt. For this reason, finger millet is one of the putative crops to introduce and cultivate on reclaimed land and prepare the global climate exchange in Korea. In present study, genetic diversity and structure of different populations of finger millet from Africa and South Asia was examined at molecular level using newly developed EST-Simple Sequence Repeat (EST-SSR) markers. In total, 46 primers produced 292 alleles in a size range of 100-500 bp and mean Polymorphism Information Content (PIC) and Marker Index (MI) were 0.372 and 1.04, respectively. 46 primers showed polymorphism and 21 primers were identified as having a PIC value above 0.5. Principal coordinates analysis and the dendrogram constructed out of combined data of both markers showed grouping of finger millet accessions to their respective area of collection. The 156 accessions were more classified into four groups, such as three groups of Africa collection and one group of Asia. Results of present study can be useful in identifying diverse accessions and management of this plant resource. Moreover, the novel SSR markers developed can be utilized for various genetic analyses in this species in future.

• 한국환경복원기술학회지
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• 제15권2호
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• pp.19-29
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• 2012

Numerous studies suggested that fish assemblage structure reflects the status of stream ecosystems. The status of streams integrity, including various trophic levels, water quality and habitat degradation, can be assessed by fish assemblages. In this study, we investigated the relationships between fish assemblages and streamline geometry of streams. Previous studies suggested that geomorphologic parameter can be a critical factor of permeability between adjacent two systems. From a landscape ecological perspective, edges may partially control the flow rate of energy between two adjacent systems. Thus, the Streamline geometry can be a geomorphologic parameter that exhibits the integrity of stream. We selected the Nakdong river for study areas, which is one of major rivers and the longest (525 km) River in South Korea. We used the revised IBI representing overall ecological characteristics of Korean fish assemblages and eight sub-assessment criteria of IBI, collected from 82 sampling sites in the Nakdong River. For calculating the Streamline geometry, we measured fractal dimension index that generally used in biology, ecology and landscape ecology. We used the digital land-use/land-cover map and generated a 1-km buffer for each sampling site and refined the shape of the Streamlines. Pearson correlation analyses were performed between Streamline geometry and IBI and sub-assessment criteria of IBI. The results show that IBI and eight sub-assessments of fish are significantly correlated with geometry of Streamline. The fractal dimension of Streamline geometry were related with IBI (r = 0.48) and six sub-assessments of IBI, including total number of native fish and native species, the number of riffle benthic species, sensitive species, tolerant species and native insectivore. Especially, the number of tolerant species(r = -0.52) and native insectivore(r = 0.52) show strong correlation with geometry of Streamline. These results indicate that lower Streamline geometry can result in poor fish assemblages, while higher geometry of Streamline can enhance fish assemblages by potentially supplying insects and better habitat conditions. We expect the results of our study to be useful for stream restoration and management. However, we see the necessity of study investigating the mechanisms how Streamline geometry affect fish assemblages.

• Journal of Ecology and Environment
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• 제43권1호
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• pp.43-60
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• 2019

Background: Tropical montane forests played an important role in the provision of ecosystem services. The intense degradation and deforestation for the need of agricultural land expansion result in a significant decline of forest cover. However, the expansion of agricultural land did not completely destruct natural forests. There remain forests inaccessible for agricultural and grazing purpose. Studies on these forests remained scant, motivating to investigate biomass and soil carbon stocks. Data of biomass and soils were collected in 80 quadrats ($400m^2$) systematically in 5 forests. Biomass and disturbance gradients were determined using allometric equation and disturbance index, respectively. The regression modeling is employed to explore the spatial distribution of carbon stock along disturbance and environmental gradients. Correlation analysis is also employed to identify the relation between site factors and carbon stocks. Results: The result revealed that a total of 1655 individuals with a diameter of ${\geq}5cm$, representing 38 species, were measured in 5 forests. The mean aboveground biomass carbon stocks (AGB CS) and soil organic carbon (SOC) stocks at 5 forests were $191.6{\pm}19.7$ and $149.32{\pm}6.8Mg\;C\;ha^{-1}$, respectively. The AGB CS exhibited significant (P < 0.05) positive correlation with SOC and total nitrogen (TN) stocks, reflecting that biomass seems to be a general predictor of SOCs. AGB CS between highly and least-disturbed forests was significantly different (P < 0.05). This disturbance level equates to a decrease in AGB CS of 36.8% in the highly disturbed compared with the least-disturbed forest. In all forests, dominant species sequestrated more than 58% of carbon. The AGB CS in response to elevation and disturbance index and SOC stocks in response to soil pH attained unimodal pattern. The stand structures, such as canopy cover and basal area, had significant positive relation with AGB CS. Conclusions: Study results confirmed that carbon stocks of studied forests were comparable to carbon stocks of protected forests. The biotic, edaphic, topographic, and disturbance factors played a significant variation in carbon stocks of forests. Further study should be conducted to quantify carbon stocks of herbaceous, litter, and soil microbes to account the role of the whole forest ecosystem.

• 한국농림기상학회지
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• 제21권2호
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• pp.111-116
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• 2019

세균과 바이러스에 감염된 작물의 생물적 스트레스 탐지를 원격탐지 기술 기반의 열적외 센서를 이용하여 실내 생육 챔버에서 실험하였다. 감염으로 인한 엽온의 증가와 감염 농도에 따른 엽온 차이를 확인했다. 또한 엽온 기반으로 산출한 CWSI 값은 감염 잎에서 증가하였고, 그러한 현상은 육안으로 병징을 발견하기 하루 전에 시작되었다. 따라서 스마트팜 시스템의 작물 모니터링에 열적외 센서를 이용한다면, 병해의 탐지는 물론 피해 등급 평가, 조기 알람 등에 활용될 수 있을 것이다. 하지만 실제 스마트팜 적용을 위해서는 향후 엽온 측정 정확도 향상 기술, 자료 해석 방법, 생물 비생물적 스트레스 구별 알고리즘 연구 등이 추가로 필요할 것이다.