• 제목/요약/키워드: Biological specimen

검색결과 211건 처리시간 0.019초

First record of Hirtomurex nakamurai (Muricidae: Gastropoda) from Korean waters

  • Lee, Sang-Hwa;Kil, Hyun-Jong;Park, Taeseo
    • Journal of Species Research
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    • 제5권3호
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    • pp.530-532
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    • 2016
  • A single specimen in the subfamily Coralliophilinae in Family Muricidae was collected from Jeju-do by SCUBA diving survey. It was identified as Hirtomurex nakamurai Kosuge, 1985 based on external morphological characteristics. The Coralliophilinae species, commonly known as coral snails, are broadly distributed in tropical and temperate oceans from shallow subtidal zones up to 1,000 m in depth. To date, only four Coralliophila species in the subfamily Coralliophilinae have been reported from Korean waters. Prior to this report, Hirtomurex species has not been reported from Korean waters yet. As a result of this study, a total of five species in two genera of subfamily Coralliophilinae are recorded as Korean mollusk fauna.

Miscanthus wangpicheonensis T.I. Heo & J.S. Kim (Poaceae): A new species from Korea

  • Heo, Tae-Im;Kim, Jung-Hyun;Ku, Youn-Bong;Kim, Jin-Seok
    • Journal of Species Research
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    • 제10권1호
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    • pp.57-62
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    • 2021
  • A new species, Miscanthus wangpicheonensis of section Kariyasua, is described and illustrated from the morphological characteristics based on a type specimen collected from Gyeongsangbuk-do. This new species is similar to Miscanthus sacchariflorus (Maxim.) Hack., and M. longiberbis (Hack.) Nakai. The characters which distinguish the above two species are short leaves and racemes, callus hairs 1-1.5-times longer than spikelet, and well-developed awns of spikelet. The specific epithet, "wangpicheonensis", is based on the name of the locality where the new species is found. We assume this new species originated from the hybridization of Miscanthus sacchariflorus (Maxim.) Hack., and M. longiberbis (Hack.) Nakai. Miscanthus wangpicheonensis is found in only one locality in Uljin-gun, Gyeongsangbuk-do, Republic of Korea.

A New Record of Aphid Parasitoid Wasp Ephedrus lacertosus (Hymenoptera: Braconidae: Aphidiinae) from South Korea

  • Kim, Sangjin;Kim, Yeongmo;Kim, Hyojoong
    • Animal Systematics, Evolution and Diversity
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    • 제38권4호
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    • pp.263-266
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    • 2022
  • The genus Ephedrus Haliday, 1833 is a large taxon of Aphidiinae, consisting of 48 valid species in the world. This genus is considered to be important as a biological control agency, which includes solitary koinobiont parasitoids on aphids. One of its interesting characteristics is both male and female have 11-segmented antennae. In previous study, this genus was subdivided into three subgenus, Breviephedrus, Ephedrus and Fovephedrus, based on molecular and morphological characters. In this study, one Ephedrus species is firstly recorded from South Korea. Since it has been collected from Geumsan-gun in 2005 and deposited as dried specimen at Naturalis Biodiversity Center in Netherland, we recently confirmed it. Description and illustrations of the E. lacertosus are provided.

Unrecorded species of Korean protozoans discovered through the project of 'Discovery of Korean Indigenous Species' III

  • Kyu-Seok Chae;Kang-San Kim;Jongwoo Jung;Gi-Sik Min
    • Journal of Species Research
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    • 제12권4호
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    • pp.355-361
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    • 2023
  • In this paper, we present unrecorded protozoans of Korea that were discovered, through the 'Discovery of Korean Indigenous Species' project hosted by the 'National Institute of Biological Resources (NIBR)'. A taxonomic account is provided for each identified species, offering comprehensive information such as species name, Korean name, collection site, synonyms, specimen vouchers, diagnoses, and figures. This study introduces 13 previously unrecorded Korean protozoan species that are classified into three phyla: Amoebozoa, Cercozoa, and Ciliophora. Notably, the cercozoan family Chlamydophryidae was recorded in Korea for the first time, together with the discovery of three previously unreported genera: Diaphoropodon within Cercozoa, and Metauroleptus and Hemicycliostyla within Ciliophora.

A report on 14 unrecorded bacterial species isolated from the Nakdong River, South Korea

  • Cho, Ja Young;Baek, Kiwoon;Kim, Eui-Jin;Han, Ji-Hye;Hwang, Seoni;Choi, Ahyoung
    • Journal of Species Research
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    • 제9권2호
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    • pp.77-84
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    • 2020
  • As a part of the research project "Survey of freshwater organisms and specimen collection," freshwater samples were collected from the Nakdong River. Among the bacterial isolates, we selected strains that showed higher than 98.7% 16S rRNA gene sequence similarity with confirmed bacterial species previously unreported in South Korea. The 14 new records to South Korea were phylogenetically diverse and belonged to four phyla, six classes, 11 orders, and 14 genera. At the genus level, these species were found to be affiliated with Reyranella, Ferrovibrio, Brevundimonas, and Aquidulcibacter of the class Alphaproteobacteria; Pseudomonas, Cellvibrio, and Photobacterium of the class Gammaproteobacteria; Paenibacillus and Bacillus of the phylum Firmicutes; Chryseobacterium, Flavobacterium, Pedobacter of the phylum Bacteroidetes; and Actinomadura and Leifsonia of the phylum Actinobacteria. These species were further characterized by examining their Gram reaction, colony and cell morphologies, biochemical properties, and phylogenetic positions. The detailed descriptions of these 14 previously unreported species are provided.

제주도 북부 연안에서 출현한 학공치과 한국미기록종, Hemiramphus far (First Record of the Black-barred Halfbeak, Hemiramphus far (Beloniformes: Hemiramphidae) from Jeju Island, Korea)

  • 김병직;안정현;이승현
    • 한국어류학회지
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    • 제26권2호
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    • pp.139-142
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    • 2014
  • 제주도 북부 연안에서 채집된 학공치과 어류 1개체(표준체장 172.1 mm)를 근거로 Hemiramphus far를 한국미기록종으로 기재 보고한다. 본 종은 몸이 가늘고 긴 신장형으로 꼬리지느러미가 이차하고, 하악이 매우 길게 돌출되어 있는 점, 등지느러미와 뒷지느러미가 각각 13연조와 11연조로 이루어진 점, 등지느러미전방 비늘수가 36개인 점, 체색이 은백색이며 체측에 5개의 흑색 세로무늬가 있는 점, 하악 후단 봉합부, 등지느러미선단 및 꼬리지느러미 상엽 후단이 황색인 점이 특징적이다. 본 종의 신한국명으로, "검무늬학공치"를 제안한다.

Sequence Validation for the Identification of the White-Rot Fungi Bjerkandera in Public Sequence Databases

  • Jung, Paul Eunil;Fong, Jonathan J.;Park, Myung Soo;Oh, Seung-Yoon;Kim, Changmu;Lim, Young Woon
    • Journal of Microbiology and Biotechnology
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    • 제24권10호
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    • pp.1301-1307
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    • 2014
  • White-rot fungi of the genus Bjerkandera are cosmopolitan and have shown potential for industrial application and bioremediation. When distinguishing morphological characters are no longer present (e.g., cultures or dried specimen fragments), characterizing true sequences of Bjerkandera is crucial for accurate identification and application of the species. To build a framework for molecular identification of Bjerkandera, we carefully identified specimens of B. adusta and B. fumosa from Korea based on morphological characters, followed by sequencing the internal transcribed spacer region and 28S nuclear ribosomal large subunit. The phylogenetic analysis of Korean Bjerkandera specimens showed clear genetic differentiation between the two species. Using this phylogeny as a framework, we examined the identification accuracy of sequences available in GenBank. Analyses revealed that many Bjerkandera sequences in the database are either misidentified or unidentified. This study provides robust reference sequences for sequence-based identification of Bjerkandera, and further demonstrates the presence and dangers of incorrect sequences in GenBank.

A report on 17 unrecorded bacterial species in Korea isolated from Lakes Soyang and Chungju in 2016

  • Jeon, Hyoung Tae;Joung, Yochan;Kim, Suhyun;Lim, Yeonjung;Cho, Jang-Cheon
    • Journal of Species Research
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    • 제6권2호
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    • pp.163-170
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    • 2017
  • As a part of the research program 'Survey of freshwater organisms and specimen collection', freshwater samples were collected from Lakes Soyang and Chungju in 2016. Hundreds of bacterial strains were isolated from the samples and were identified based on 16S rRNA gene sequences. Among the bacterial isolates, strains showing higher than 98.7% sequence similarity with validly published bacterial species not reported in Korea were selected as unrecorded bacterial species. Based on 16S rRNA gene sequence similarity, 17 strains were identified as unrecorded bacterial species in Korea. The 17 bacterial strains were phylogenetically diverse and belonged to four phyla, seven classes, 13 orders, 14 families, and 16 genera. At generic level, the unreported species were affiliated with Caulobacter, Paracoccus, and Mesorhizobium of the class Alphaproteobacteria, Deefgea, Undibacterium, Chitinimonas, Inhella, and Sphaerotilus of the class Betaproteobacteria, Vibrio and Cellvibrio of the class Gammaproteobacteria, Sanguibacter and Clavibacter of the phylum Actinobacteria, Lactococcus of the phylum Firmicutes, Deinococcus of the class Deinococci, and Chryseobacterium and Flavobacterium of the phylum Bacteroidetes. The unreported species were further characterized by examining Gram reaction, colony and cell morphology, biochemical properties, and phylogenetic position. The detailed description of the 17 unreported species are also provided.

A report of 22 unrecorded bacterial species in Korea, isolated from the North Han River basin in 2017

  • Joung, Yochan;Park, Miri;Jang, Hye-Jin;Jung, Ilsuk;Cho, Jang-Cheon
    • Journal of Species Research
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    • 제7권3호
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    • pp.193-201
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    • 2018
  • Culturable bacterial diversity was investigated using freshwater and sediment samples collected from the North Han River basin in 2017, as a part of the research program 'Survey of freshwater organisms and specimen collection'. Over a thousand bacterial strains were isolated from the samples and identified based on 16S rRNA gene sequences. Among the bacterial isolates, 22 strains showing higher than 98.7% sequence similarity with validly published bacterial species, but not reported in Korea, were classified as unrecorded species in Korea. The 22 bacterial strains were phylogenetically diverse and assigned to 6 classes, 11 orders, 15 families, and 21 different genera. At the generic level, the unreported species were affiliated with Flavobacterium of the class Flavobacteria, Flexibacter of the class Cytophagia, Blastomonas, Brevundimonas, Elstera, Rhizobium, Roseomonas, Sphingomonas, and Xanthobacter of the class Alphaproteobacteria, Albidiferax, Cupriavidus, Curvibacter, Ferribacterium, Hydrogenophaga, Iodobacter, Limnohabitans, Polaromonas, Undibacterium, and Variovorax of the class Betaproteobacteria, Pseudomonas of the class Gammaproteobacteria, and Arcobacter of the class Epsilonproteobacteria. The unreported bacterial species were further characterized by examining Gram reaction, colonial and cellular morphology, and biochemical properties. The detailed descriptions of 22 strains of the unreported bacterial species are also provided.

병동 간호사 대상의 다각적 중재가 배양검사 검체의 보관과 상태 및 운송에 미치는 영향 (Effect of Multifaceted Interventions for Ward Nurses on the Storage, Conditions, and Transportation of Specimens for Microbial Culture)

  • 조민정;정재심;김윤희
    • Journal of Korean Biological Nursing Science
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    • 제24권2호
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    • pp.95-103
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    • 2022
  • Purpose: The purpose of this study was to provide multifaceted interventions for nurses and to confirm changes in their knowledge, perception, and actual practice on the adequate storage, conditions, and transportation of culture specimens. Methods: A one-group pretest-posttest experimental design was conducted with 41 nurses in two general wards of a tertiary acute care hospital in Seoul. Multifaceted interventions including education, feedback, posting guidelines and reminders, and improvement in specimen management accessibility were provided from May 2019 to January 2020. Outcomes were measured before and after the interventions. Knowledge and perception of the nurses were evaluated using self-reported questionnaires and actual practice by observation. Results: After the interventions, the average knowledge score on transportation time was significantly increased (Z= -4.89, p< .001). However, the knowledge score on storage methods was not significantly increased. The perception score was significantly increased (t= -3.19, p= .003). The proportion of specimen storage times, places, and conditions managed properly was significantly increased from 43.0% (46/107) to 77.1% (84/109) (p< .001). The average transportation time of blood samples to the laboratory significantly decreased from 3 hours 36 minutes (± 1 hour 52 minutes) to 3 hours 1 minute (± 1 hour 41 minutes) (t= 2.51, p= .013). The percentage of blood culture specimens arriving within 2 hours was increased significantly from 22.9% to 39.2% (χ2= 6.90, p= .009). Conclusion: The interventions were effective. However, some specimens remained in the ward longer than expected after the interventions. This requires further interventions.