• Title/Summary/Keyword: Biological estimation

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Estimation of Pollutant Load Using Genetic-algorithm and Regression Model (유전자 알고리즘과 회귀식을 이용한 오염부하량의 예측)

  • Park, Youn Shik
    • Korean Journal of Environmental Agriculture
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    • v.33 no.1
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    • pp.37-43
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    • 2014
  • BACKGROUND: Water quality data are collected less frequently than flow data because of the cost to collect and analyze, while water quality data corresponding to flow data are required to compute pollutant loads or to calibrate other hydrology models. Regression models are applicable to interpolate water quality data corresponding to flow data. METHODS AND RESULTS: A regression model was suggested which is capable to consider flow and time variance, and the regression model coefficients were calibrated using various measured water quality data with genetic-algorithm. Both LOADEST and the regression using genetic-algorithm were evaluated by 19 water quality data sets through calibration and validation. The regression model using genetic-algorithm displayed the similar model behaviors to LOADEST. The load estimates by both LOADEST and the regression model using genetic-algorithm indicated that use of a large proportion of water quality data does not necessarily lead to the load estimates with smaller error to measured load. CONCLUSION: Regression models need to be calibrated and validated before they are used to interpolate pollutant loads, as separating water quality data into two data sets for calibration and validation.

An Efficient Method for Estimating Average Speed of Sound in Ultrasound Medical Imaging (초음파 의료영상에서 매질의 평균음속도 측정방법에 대한 연구)

  • 정목근;권성재
    • Journal of Biomedical Engineering Research
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    • v.19 no.3
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    • pp.321-325
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    • 1998
  • This paper presents a simple, practical, and efficient method for estimating the speed of sound in reflection mode in ultrasound medical imaging. Its accurate determination is indispensable in order to obtain both good resolution and correct geometrical and volumetric information about human organs such as heart and kidney. Up to now, there have been several methods available, but they all suffer from either poor performance or high complexity. The proposed method finds out an optimum focusing delay profile in such a way that the brightness in a region of interest is maximized using continuous dynamic focusing in receive under fixed transmit focusing. Experiments carried out on a real ultrasound medical phantom reveals that the method a quite simple and effective in providing good speed of sound estimation, hence improved resolution and images, adding to dignostic utility.

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A study on monitoring of fatigue using the $2^{nd}$ order maximum entropy method ($2^{nd}$ order maximum entropy method를 이용한 근피로도의 측정에 관한 연구)

  • Cho, S.J.;Kim, M.S.;Lee, K.W.;Kim, K.G.;Kim, S.L.;Park, H.S.;Lee, K.M.
    • Proceedings of the KOSOMBE Conference
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    • v.1990 no.05
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    • pp.47-50
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    • 1990
  • In this study, the degree of spectral transfer to lower frequency caused by accumulation of Latic acid inside the muscle is estimated the convintional dip analysis, zero-crossing method and FFT method have intrinsic errors and estimation problems in case of severe noise. The new spectral analysis method using "$2^{nd}$ order Maximum Entropy Method" was applied to estimate mean frequency and we confirmed that this new method yields fast and reliable estimation over the FFT method.

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The Optimal Ellipse Estimation Method for Chromosome Bands Extraction (염색체 마디 추출을 위한 최적타원 추정기법)

  • Lee, Sang-Yeol;Lee, Kwon-Soon;Jeon, Gye-Rok;Chang, Yong-Hoon;Eom, Sang-Hui
    • Proceedings of the KOSOMBE Conference
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    • v.1995 no.05
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    • pp.227-229
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    • 1995
  • This paper attempts to examine an optimal method for the chromosome specific vector extraction. Usually, represented method are used with a line segmentation on a chromosome Image. It is not Inaccurate but also needs a long time for the analysis. This paper purpose to aquire specific vector in the image with a using optimal ellipse estimation method. Normally, shapes of chromosomes are curved and too difficult to analyze automatically. A chromosome has a lot of band which looks like an ellipse. If we can estimate their bands with an ellipse, we can reconstruct the sample Which Is straight and can be analyzed easily. We have rearranged a chromosome Image with above proposed. Result shows a reconstructed sample which Is simple for chromosome analysis.

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Environmental Conservation and Sustainable Pusan Development Strategy (환경보전과 지속가능한 부산의 도시개발방안)

  • Hwang, Young-Woo;Song, Kyo-Ook;Yhang, Wii-Joo
    • Journal of Environmental Science International
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    • v.6 no.3
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    • pp.195-203
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    • 1997
  • Pusan has experienced some different paths of urbanization and industrialization compared to other cities. and has faced the problem of over-saturation In enoronmental capacity. Pusan needs to fond out sustainable development strategies based on Agenda 21 by UNCED In 1992 to secure urban renewal. Therefore. Pusan's sustainable development strategies focus on the 1)research on envlronmental capacity and reasonable population accommodation 2)supp1y of basic enoronmental facilities for the human settlement 3)protection and efficient management of environmental pollution 4)saving and control of energy and other resources S)independent and stable euecution of plan based on biological relation 6)harmony between nature and urban spatial organization. In addition. these policies can be suggested along with the conclusions; First, ostablishment of green plan-muddle and long term environmental goals Included In the urban planning to reduce enoronmental deterioration and pollution. Second, computation of sustalnability Indeu the Index Is necessary to sustainable urban development, which is related with green GNP of the national level. Third, capacity estimation of nature and social environment-estimation of enoronmental capacity to the civilized area is required become an ecopolis, and is required to focus on the western area of Pusan which has high decree of potentiality.

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An implementation of automated ECG interpretation algorithm and system(II) - Estimation and Eliminator of interference components (심전도 자동 진단 알고리즘 및 장치 구현(II) - 잡음 성분 평가 및 제거기)

  • Kweon, H.J.;Kong, I.W.;Lee, S.H.;Shin, K.S.;Lee, M.H.
    • Proceedings of the KOSOMBE Conference
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    • v.1996 no.05
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    • pp.283-287
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    • 1996
  • This paper described the estimator and eliminator far three kinds of artifacts in electrocardiogram. The most efficient estimation of baseline drift could be obtain in the cubic spline interpolation method with the PQ and TP segment which are considered to be isoelectric, from the experimental results obtained from the applied 4 types of algorithms. The time loss and distortion could be avoided with the aid of detection criteria by checking if baseline drifts exist or not. The AIEF proposed in this paper was verified as having the best removal performance with less distortion in the QRS complex through the comparison of 5 proposed algorithms. furthermore, the AIEF are most suitable far the ECG analyzer which was only needed relatively short time data due to the fast conversion into the stable state. The proposed parabolic filter with 11 points width was identified as having the best performance for the elimination of muscle artifacts. Also we could obtain 99.7% detection accuracy of spike component and minimize the error identifying QRS complex as spike.

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A Study on the Estimation of Continuous Blood Pressure using PIT and Biometric Parameters

  • Park Eun-Kyoung;Cho Baek-Hwan;Park Sang-Hae;Lee Jong-Youn;Hwang Hwan-Sik;Park Hun-Ki;Lee Jong-Shill;Kim In-Young;Kim Sun-I
    • Journal of Biomedical Engineering Research
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    • v.27 no.1
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    • pp.1-5
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    • 2006
  • In this paper, we propose a subject-independent regression model to estimate systolic blood pressures (SBP) conveniently and continuously. There have been several researches on estimating SBP with pulse transit time (PTT) and they showed promising results. However, previous studies used only PTT as the estimation parameter, and their models were generated with just one person's PTT data which is not applicable to estimating other person's SBP. Therefore, we collected several additional biometric parameters with 202 healthy subjects. After statistical analysis of measured biometric parameters with SBP, we chose final estimating parameters including PTT to generate a multiple linear regression model for estimating SBP. Comparing the results of our study with approvable standards of automated sphygmomanometers developed by Association for the Advancement of Medical Instrumentation and approved by American National Standards Institute (ANSI/AAMI) indicates that our proposed method for continuously blood pressures monitoring gives an acceptable error.

Adaptive Reconstruction of Harmonic Time Series Using Point-Jacobian Iteration MAP Estimation and Dynamic Compositing: Simulation Study

  • Lee, Sang-Hoon
    • Korean Journal of Remote Sensing
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    • v.24 no.1
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    • pp.79-89
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    • 2008
  • Irregular temporal sampling is a common feature of geophysical and biological time series in remote sensing. This study proposes an on-line system for reconstructing observation image series contaminated by noises resulted from mechanical problems or sensing environmental condition. There is also a high likelihood that during the data acquisition periods the target site corresponding to any given pixel may be covered by fog or cloud, thereby resulting in bad or missing observation. The surface parameters associated with the land are usually dependent on the climate, and many physical processes that are displayed in the image sensed from the land then exhibit temporal variation with seasonal periodicity. A feedback system proposed in this study reconstructs a sequence of images remotely sensed from the land surface having the physical processes with seasonal periodicity. The harmonic model is used to track seasonal variation through time, and a Gibbs random field (GRF) is used to represent the spatial dependency of digital image processes. The experimental results of this simulation study show the potentiality of the proposed system to reconstruct the image series observed by imperfect sensing technology from the environment which are frequently influenced by bad weather. This study provides fundamental information on the elements of the proposed system for right usage in application.

Genomic Insights into the Rice Blast Fungus through Estimation of Gene Emergence Time in Phylogenetic Context

  • Choi, Jaeyoung;Lee, Jong-Joon;Jeon, Junhyun
    • Mycobiology
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    • v.46 no.4
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    • pp.361-369
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    • 2018
  • The rice blast fungus, Magnaporthe oryzae, is an important pathogen of rice plants. It is well known that genes encoded in the genome have different evolutionary histories that are related to their functions. Phylostratigraphy is a method that correlates the evolutionary origin of genes with evolutionary transitions. Here we applied phylostratigraphy to partition total gene content of M. oryzae into distinct classes (phylostrata), which we designated PS1 to PS7, based on estimation of their emergence time. Genes in individual phylostrata did not show significant biases in their global distribution among seven chromosomes, but at the local level, clustering of genes belonging to the same phylostratum was observed. Our phylostrata-wide analysis of genes revealed that genes in the same phylostratum tend to be similar in many physical and functional characteristics such as gene length and structure, GC contents, codon adaptation index, and level of transcription, which correlates with biological functions in evolutionary context. We also found that a significant proportion of genes in the genome are orphans, for which no orthologs can be detected in the database. Among them, we narrowed down to seven orphan genes having transcriptional and translational evidences, and showed that one of them is implicated in asexual reproduction and virulence, suggesting ongoing evolution in this fungus through lineage-specific genes. Our results provide genomic basis for linking functions of pathogenicity factors and gene emergence time.

Application of KORSLE to Estimate Soil Erosion at Field Scale (한국형 토양유실공식에 의한 토양유실량 현장예측)

  • Song, Jae Min;Yang, Jae E;Lim, Kyoung Jae;Park, Youn Shik
    • Journal of Soil and Groundwater Environment
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    • v.24 no.5
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    • pp.31-41
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    • 2019
  • In 2013, the Ministry of Environment in South Korea promulgated a new regulatory bulletin that contained revised enforcement ordinance on soil management protocols. The bulletin recommends the use of Universal Soil Loss Equation (USLE) for the soil erosion estimation, but USLE has limited applicability in prediction of soil erosion because it does not allow direct estimation of actual mass of soil erosion. Therefore, there is a great need of revising the protocol to allow direct comparison between the measured and estimated values of soil erosion. The Korean Soil Loss Equation (KORSLE) was developed recently and used to estimate soil loss in two fields as an alternative to existing USLE model. KORSLE was applied to estimate monthly rainfall erosivity indices as well as temporal variation in potential soil loss. The estimated potential soil loss by KORSLE was adjusted with correction factor for direct comparison with measured soil erosion. The result was reasonable since Nash-Stucliff efficiency were 0.8020 in calibration and 0.5089 in validation. The results suggest that KORSLE is an appropriate model as an alternative to USLE to predict soil erosion at field scale.