• Title/Summary/Keyword: Biochemical information

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Seasonal Variation of the Quantity and Quality of Seston as Diet Available to Suspension-Feeders in Gosung and Kangjin Bays of Korea (고성만과 강진만에서 현탁물 섭식자에 유용한 입자물질 양과 질의 계절 변동)

  • LEE Pil-Yong;KANG Chang-Keun;CHOI Woo-Jeung;YANG Han-Seob
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.34 no.4
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    • pp.340-347
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    • 2001
  • Seasonal variation of the elemental and biochemical composition of the suspended particulate matter (SPM) was investigated in terms of quantity and quality of diets for suspension feeders from July 1999 to August 2000 in two coastal bay systems of Gosung and Kangjin Bays in Korea. No clear patterns in the seasonal variations of SPM concentration were found in these two bay systems. The results indicated that the seasonal variation of SPM could not be considered the variation of food available to suspension-feeders. The simultaneous peaks in chlorophyll a and biochemical components in summer indicated that the quantity of the particulate organic matter primarily depended on phytoplankton productivity. However, no correlation between chlorophyll a and biochemical components [particulate protein (PPr), carbohydrate (PCHO) and lipid] were found, indicating that other processes might also contribute to the particulate organic matter in the period when the phytoplankton biomass was low. High C: Chl a and C:N, and carbohydrate peaks during the autumn to spring period suggested that resuspension of surface sediments was a probable process to supply the particulate organic matter. The food material, represented by summing up the total quantity of three biochemical components, was highest in spring with minor peaks during the period from autumn to the next spring, The food index, calculated as the ratio of food material to total SPM, did not generally exceed $6\%$ with short peaks during the year. Therefore, nutritional quality of SPM in the bays are relatively poor than in other more productive coastal waters in the world. Our results confirm that the measurement of a single chemical variable cannot describe fully the nutritive value of the seston available to suspension-feeders as previously proposed, and the biochemical composition of SPM can provide effective information on its origin and nutritive Quality.

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Usefulness of Chlorine Dioxide to Airborne Bacteria at a Hospital Using Biological Information (생물학적 정보를 활용한 병원에서 존재하는 공기중 부유 세균에 대한 이산화염소의 유용성)

  • Jung, Suk-Yul
    • Journal of Internet of Things and Convergence
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    • v.6 no.2
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    • pp.19-24
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    • 2020
  • In the present study, using biological information of bacteria and biochemical information of chlorine dioxide gas, Gram-positive bacteria, e.g., Alloiococcus otitis, Erysipelothrix rhusiopathiae, Staphylococcus caprae, Staphylococcus lentus, and gram-negative bacteria, e.g., Acinetobacter baumannii complex, Aeromonas salmonicida, Brucella melitensis, Oligella ureolytica were used whether a plastic kit to release ClO2 gas could inhibit their growth. Overall, chlorine dioxide gas showed about 99% inhibition of bacterial growth, with less than 10 CFU. However, it was found that Gram positive Alloiococcus otitis and Gram negative Aeromonas salmonicida had more than about 50 CFU. When comparing the results of experiments with several bacteria, it suggested that the concentration of chlorine dioxide gas would be at least 10 ppm to 400 ppm for the bacterial inhibition. The results of this study could be used as basic data to evaluate the clinical usefulness of chlorine dioxide gas. If this study helps with prior knowledge to help clinicians to recognize and prevent the presence of micro-organisms that cause infections in hospitals, it would be helpful for activities such as patient care as a convergence field. In the future, it is considered that the research results will be the basis for rapidly inhibiting the microbes infected with patients by utilizing data of the information of the microbes that are inhibited for chlorine dioxide gas.

Photovoltaic Properties of Poly[(9,9-dioctylfluorenyl-2,7-vinylene )-co-{2-(3'-dimethyldodecylsilylphenyl)-1,4-phenylenevinylene}] for Electro-Active Devices

  • Jin Sung-Ho;Shim Jong-Min;Jung, Seung-Jin;Kim, Sung-Chul;Naidu B. Vijaya Kumar;Shin, Won-Suk;Gal Yeong-Soon;Lee, Jae-Wook;Kim, Ji-Hyeon;Lee, Jin-Kook
    • Macromolecular Research
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    • v.14 no.5
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    • pp.524-529
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    • 2006
  • New, thermally robust, arylenevinylene conjugated polymers, including poly(9,9-dioctylfluorenyl-2,7-vinylene) [poly(FV)] and poly[2-(3'-dimethyldodecylsilylphenyl)-1,4-phenylenevinylene] [poly(m-SiPhPV)], were synthesized and used for the fabrication of efficient photovoltaic cells. Bulk heterojunction photovoltaic cells fabricated by blending one of the polymers, [poly(FV)], [poly(m-SiPhPV)], and poly(FV-co-m-SiPhPV), with the fullerene derivative [6,6]-phenyl-$C_{61}$-butyric acid methyl ester (PCBM) were found to have a power conversion efficiency of up to 0.038%..

Strategy for Prevention of Weakly Flocculating Characters in Bottom Brewing Yeast Strains

  • Cheong, Chul;Wackerbauer, Karl;Kang, Soon-Ah
    • Food Science and Biotechnology
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    • v.17 no.3
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    • pp.558-563
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    • 2008
  • To prevent weakly flocculating characters of bottom brewing yeast during first fermentation, various technical investigations were carried out using strain of Saccharomyces cerevisiae. It appeared that the propagation at $10^{\circ}C$ promoted the molecular structure and biochemical composition of cell wall in favor of flocculation. The yeast grown at $20^{\circ}C$ by addition of zinc ion also had a stimulating effect on flocculation behavior during first fermentation cycle. The zinc ion did not influence directly on the changes of cell wall in favor of stronger flocculence. The increased fermentation activity of yeast due to addition zinc ion was rather responsible for the intensified flocculation capacity. It was concluded that the weakly flocculating characters of bottom brewing yeast during first fermentation can be solved by using yeast propagated at $10^{\circ}C$ or by means of yeast by addition of zinc ion during propagation.

Formulating Analytical Solution of Network ODE Systems Based on Input Excitations

  • Bagchi, Susmit
    • Journal of Information Processing Systems
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    • v.14 no.2
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    • pp.455-468
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    • 2018
  • The concepts of graph theory are applied to model and analyze dynamics of computer networks, biochemical networks and, semantics of social networks. The analysis of dynamics of complex networks is important in order to determine the stability and performance of networked systems. The analysis of non-stationary and nonlinear complex networks requires the applications of ordinary differential equations (ODE). However, the process of resolving input excitation to the dynamic non-stationary networks is difficult without involving external functions. This paper proposes an analytical formulation for generating solutions of nonlinear network ODE systems with functional decomposition. Furthermore, the input excitations are analytically resolved in linearized dynamic networks. The stability condition of dynamic networks is determined. The proposed analytical framework is generalized in nature and does not require any domain or range constraints.

Protein-ligand interactions from the perspective of binding specificity

  • Ahmad, Shandar
    • Proceedings of the Korean Society for Bioinformatics Conference
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    • 2003.10a
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    • pp.4-4
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    • 2003
  • A large number of in-vitro experiments on the inhibition of kinases and pretenses are reported in literature, and compiled by ProLINT database. Using this powerful wealth of knowledge, we have carried our an analysis of ligand specificity of these two classes of proteins. Each of the pretenses and kinases included in the database has been assigned a consensus ligand fragment signature, based on the available information about its interaction with different ligands. A set of 43 fragments efficiently represent every ligand. We have then organized the consensus fragment signatures for every protein in form of a cluster-tree diagram. This tree is also constructed from other sequence, structure and physical considerations. Cluster-cluster comparison between these analyzes provide a valuable information about ligand specific interactions and similarities between proteins.

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A System To Integrate The Biochemical Network Data Efficiently (생화학적 네트워크 데이터의 효율적인 통합을 위한 시스템)

  • Jung, Tae-Sung;Ahn, Myung-Sang;Cho, Wan-Sup
    • Proceedings of the Korean Information Science Society Conference
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    • 2005.07b
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    • pp.238-240
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    • 2005
  • 유전자의 생물학적 기능을 밝히고 세포 내 상호작용을 이해하는 것은 post-genome era의 가장 중요한 작업 중 하나이다. 세포는 서로 다른 컴포넌트들의 상호작용에 의해 아주 복잡한 네트워크를 구성한다. 생화학적 네트워크에는 metabolic, regulatory, signal transduction과 같은 세포의 프로세스를 포함한다. 이러한 생화학적 네트워크들은 서로 다른 정보체계를 가지고 각기 다른 데이터베이스에 분산되어 저장관리 되고 있다. 따라서 생화학적 네트워크 데이터를 체계적으로 효율적으로 저장, 관리하기 위한 데이터베이스에 대한 필요성이 증대되고 있다. 본 논문에서는 기존의 생화학적 네트워크 데이터베이스의 장.단점을 분석하고 객체지향 방식에 입각한 새로운 생화학적 네트워크 데이터의 통합을 위한 시스템 모델을 제시한다. 제안된 시스템 모델은 생화학적 네트워크 데이터에 대한 생물학전 관계를 자연스럽게 표현할 수 있는 객체지향 모델을 사용하였다. 또한 생화학적 네트워크 모델을 묘사하기 위한 응용프로그램 사이의 데이터 교환의 표준언어인 SBML[2]스키마를 기반으로 하고 있다.

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A Non-contact Two-Dimensional Position Sensing Device Using Electromagnetic Induction (전자기 유도 방식을 이용한 비접촉식 2차원 위치 센서)

  • Ryu, Young-Kee;Koh, Kuk-Won;Kim, Hak-Soo
    • Journal of the Korean Society for Precision Engineering
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    • v.29 no.11
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    • pp.1159-1163
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    • 2012
  • In this paper, we would like to introduce two dimensional non-contact position sensor by using an electromagnetic induction based coil system and an algorithm to estimate the position of pointer. The sensor which will introduce in this paper is composed of a pointer including LC resonant circuit and a sensor board to detect the electromagnetic signal from the pointer. Because of the simplicity shape of the line antenna, low cost and free form curved shape of the sensor device is possible. In this research, we proposed a new two dimensional non-contact type electromagnetic sensor system and realized the proposed sensor device. From the experiments, the proposed device can be employed for the two dimensional position sensor.

Transfer RNA Acceptor Stem Determinants for Specific Aminoacylation by Class II Aminoacyl-tRNA Synthetases

  • Musier, Karin
    • BMB Reports
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    • v.31 no.6
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    • pp.525-535
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    • 1998
  • A critical step in the faithful translation of genetic information is specific tRNA recognition by aminoacyl-tRNA synthetases. These enzymes catalyze the covalent attachment of particular amino acids to the terminal adenosine of cognate tRNA substrates. In general, there is one synthetase for each of the twenty amino acids and each enzyme must discriminate against all of the cellular tRNAs that are specific for the nineteen noncognate amino acids. Primary sequence information combined with structural data have resulted in the division of the twenty synthetases into two classes. In recent years, several high-resolution co-crystal structures along with biochemical data have led to an increased understanding of tRNA recognition by synthetases of both classes. The anticodon sequence and the amino acid acceptor stem are the most common locations for critical recognition elements. This review will focus on acceptor stem discrimination by class II synthetases. In particular, the results of in vitro aminoacylation assays and site-directed and atomic group mutagenesis studies will be discussed. These studies have revealed that even subtle atomic determinants can provide signals for specific tRNA aminoacylation.

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Health Disaster Preparedness System for Response to Newly Emerging Terrorism (신종 테러리즘 대응을 위한 보건방재체계의 현황)

  • Wang, Soon Joo
    • Journal of the Society of Disaster Information
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    • v.1 no.1
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    • pp.73-89
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    • 2005
  • The disaster preparedness system in Korea has been developed in spite of many obstacles, but there are still many problems for response to newly emerging terrorisms due to the existing problems of disaster response system. The newly emerging terrorism in 21th century like biochemical terrorism has made us focus on terrorism preparedness, but health and medical aspect of terrorism has been overlooked. The health disaster system is more necessary for 21th terrorism response as well as the disaster engineering, economic and administrative aspects. The disaster preparedness system for bioterrorism has been developed by Ministry of Health with syndromic surveillance system and no case has been found in Korea yet and the resources of personnel and equipment as decontamination system in medical facilities are lacking in case of chemical terrorism. So through the multiple access method reflecting the risk factors in real terrorism field and human based health disaster concept, the disaster preparedness and response system to make up for the weak point should be suggested.

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