• Journal of the Korea Academia-Industrial cooperation Society
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• v.20 no.2
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• pp.434-442
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• 2019

Low Impact Development(LID) techniques has been attracting attention as a countermeasure to solve frequent flood damage in urban areas. LID is a techniques for returning to the natural hydrological cycle system by infiltrating the runoff from the impervious surface into the soil. The Bio-retention, one of the LID element technology has outflow reduction effect by reserving and infiltrating storm water runoff from watersheds. Recently, a number of studies have been carried out as interest in the reduction of storm water runoff and non-point pollutants in Bio-retention has increased. However, quantitative analysis on the outflow reduction of Bio-retention applied to small watershed is insufficient. In this study, Bio-retention model was constructed in a small watershed using K-LIDM which is capable of hydrologic analysis. When the storage capacity was increased or dividing the Bio-retention and watershed, the outflow reduction effect was 20% according to the storage capacity increase and 5~15% in the distributed Bio-retention system. The results of this analysis will be used as the basic data of future Bio-retention research related to watershed characteristics, vegetation type and soil condition.

• Journal of the Korea Institute of Military Science and Technology
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• v.27 no.4
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• pp.507-515
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• 2024

Microbial forensics is a scientific discipline for analyzing evidence related to biological crimes by identifying the origin of microorganisms. Multiple locus variable number tandem repeat analysis(MLVA) is one of the microbiological analysis methods used to specify subtypes within a species based on the number of tandem repeat in the genome, and advances in next generation sequencing(NGS) technology have enabled in silico anlysis of full-length whole genome sequences. In this paper, we analyzed unknown samples provided by Robert Koch Institute(RKI) through The United Nations Secretary-General's Mechanism(UNSGM)'s external quality assessment exercise(EQAE) project, which we officially participated in 2023. We confirmed that the 3 unknown samples were B. anthracis through nucleic acid isolation and genetic sequence analysis studies. MLVA results on 32 loci of B. anthracis were analysed by using genome sequences obtained from NGS(NextSeq and MinION) and Sanger sequencing. The MLVA typing using short-reads based NGS platform(NextSeq) showed a high probability of causing assembly error when a size of the tandem repeats was grater than 200 bp, while long-reads based NGS platform(MinION) showed higher accuracy than NextSeq, although insertion and deletion was observed. We also showed hybrid assembly can correct most indel error caused by MinION. Based on the MLVA results, genetic identification was performed compared to the 2,975 published MLVA databases of B. anthracis, and MLVA results of 10 strains were identical with 3 unkonwn samples. As a result of whole genome alignment of the 10 strains and 3 unknown samples, all samples were identified as B. anthracis strain A4564 which is associated with injectional anthrax isolates in heroin users.

• Journal of the Korean Society of Manufacturing Process Engineers
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• v.19 no.11
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• pp.78-86
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• 2020

A stress analysis was performed to verify the stability of the digging part of a garlic harvester. A finite element analysis was performed to examine the distribution and concentrated loads on the digging part of the blade and contact plate. Moreover, the stability and maximum deformation of the digging part were determined. Under a distributed load, the maximum principal stress, total deformation, and minimum safety factor ranged from 64-128 MPa, 0.35-0.70 mm, and 2.9-5.7, respectively. The analysis results for the distribution load indicated that the maximum stress occurred at the center of the blade. In contrast, under the concentrated load, the maximum principal stress, total deformation, and minimum safety factor ranged from 66-247 MPa, 0.35-0.79 mm, 1.48-5.53, respectively. The analysis results for the concentrated load indicated that stress and deformation were larger toward the edge and center, respectively.

• 한국생물공학회:학술대회논문집
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• 2005.10a
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• pp.586-587
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• 2005

• The Korea Genome Conference
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• 2004.07a
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• pp.41.2-41.2
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• 2004

• Bulletin of the Korean Chemical Society
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• v.27 no.10
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• pp.1537-1541
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• 2006

The $^1H$ and $^{13}C$ chemical shifts of eleven flavone derivatives were completely determined by basic 1D and 2D NMR experiments. Nineteen flavone derivatives including the above eleven derivatives were examined for anti-oxidative effects using the 1,1-diphenyl-2-picryl-hydrazyl assay and Caenorhabditis elegans. In order to understand the relationships between the structures of flavone derivatives and their anti-oxidative activities, a Comparative Molecular Field Analysis was performed.

• The Plant Pathology Journal
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• v.37 no.3
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• pp.307-314
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• 2021

Pepper (Capsicum annuum L.) is an important agricultural crop worldwide. Recently, Colletotrichum scovillei, a member of the C. acutatum species complex, was reported to be the dominant pathogen causing pepper anthracnose disease in South Korea. In the present study, we isolated bacterial strains from rhizosphere soil in a pepper field in Gangwon Province, Korea, and assessed their antifungal ability against C. scovillei strain KC05. Among these strains, a strain named BS1 significantly inhibited mycelial growth, appressorium formation, and disease development of C. scovillei. By combined sequence analysis using 16S rRNA and partial gyrA sequences, strain BS1 was identified as Bacillus velezensis, a member of the B. subtilis species complex. BS1 produced hydrolytic enzymes (cellulase and protease) and iron-chelating siderophores. It also promoted chili pepper (cv. Nockwang) seedling growth compared with untreated plants. The study concluded that B. velezensis BS1 has good potential as a biocontrol agent of anthracnose disease in chili pepper caused by C. scovillei.

• Journal of Microbiology and Biotechnology
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• v.25 no.5
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• pp.704-708
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• 2015

For the analysis of multiple-reaction intermediates for long-chain dicarboxylic acid biotransformation, simple and reproducible methods of extraction and derivatization were developed on the basis of gas chromatography with flame ionization detector (GC-FID) instead of mass spectrometry. In the derivatization step, change of the ratio of pyridine to MSTFA from 1:3 to 9:1 resulted in higher peak intensity (p = 0.021) and reproducibility (0.6%CV) when analyzing 32 g/l ricinoleic acid (RA). Extraction of RA and ω-hydroxyundec-9-enoic acid with water containing 100 mM Tween 80 showed 90.4-99.9% relative extraction efficiency and 2-7%CV compared with those with hydrophobic ethyl acetate. In conclusion, reduction of the pyridine content and change of the extraction solvent to water with Tween 80 provided compatible derivatization and extraction methods to GC-FID-based analysis of longchain carboxylic acids.

• Genomics & Informatics
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• v.5 no.4
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• pp.179-187
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• 2007

An increasing number of primate genomes are being sequenced. A direct comparison of repeat elements in human genes and their corresponding chimpanzee orthologs will not only give information on their evolution, but also shed light on the major evolutionary events that shaped our species. We have developed REPEATOME to enable visualization and subsequent comparisons of human and chimpanzee repeat elements. REPEATOME (http://www.repeatome.org/) provides easy access to a complete repeat element map of the human genome, as well as repeat element-associated information. It provides a convenient and effective way to access the repeat elements within or spanning the functional regions in human and chimpanzee genome sequences. REPEATOME includes information to compare repeat elements and gene structures of human genes and their counterparts in chimpanzee. This database can be accessed using comparative search options such as intersection, union, and difference to find lineage-specific or common repeat elements. REPEATOME allows researchers to perform visualization and comparative analysis of repeat elements in human and chimpanzee.

• Korean Journal of Acupuncture
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• v.28 no.4
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• pp.41-48
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• 2011

Objectives : This study aimed to explore the passive multi-channel time series analysis method by measuring bio-potentials of acupuncture point and the peripheral region Methods : Bio-potential was measured at ST36 and the peripherical region of ST36 of 5 healthy volunteers at three times. The diagram of the potential changes over time were smoothed by moving average method and similarities of ST36 and the other points were calculated. Results : In the normal weight group, bio-potential similarity tended to decrease in proportion to the distance from the acupuncture point. In the obesity group, bio-potential similarity appeared in a very wide area. Bio-potential similarity had positive correlation with BMI value. Conclusions : The passive multi-channel time series analysis method showed the possibility be appropriate for the electrical characteristics study of meridians.