• Title/Summary/Keyword: Bayesian multiple comparison

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A Bayesian State-space Production Assessment Model for Common Squid Todarodes pacificus Stock Caught by Multiple Fisheries in Korean Waters (한국 해역의 살오징어(Todarodes pacificus) 개체군 자원평가를 위한 베이지안 상태공간 잉여생산량 모델의 적용)

  • An, Dongyoung;Kim, Kyuhan;Kang, Heejung;Hyun, Saang-Yoon
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.54 no.5
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    • pp.769-781
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    • 2021
  • Given data about the annual fishery yield of the common squid Todarodes pacificus, and the catch-per-unit-effort (CPUE) data from multiple fisheries from 2000-2018, we applied a Bayesian state - space assessment model for the squid population. One of our objectives was to do a stock assessment, simultaneously incorporating CPUE data from the following three fisheries, (i) large trawl, (ii) jigger, and (iii) large purse seine, which comprised on average a year about 65% of all fisheries, allowing possible correlations to be reflected. Other objectives were to consider both observation and process errors and to apply objective priors of parameters. The estimated annual exploitable biomass was in the range of 3.50×105 to 1.22×106 MT, the estimated intrinsic growth rate was 1.02, and the estimated carrying capacity was 1,151,259 MT. Comparison with available results from stock assessment of independently analyzed single fisheries revealed a large difference from the estimated values, suggesting that stock assessment based on multiple fisheries should be performed.

Bayesian inference for an ordered multiple linear regression with skew normal errors

  • Jeong, Jeongmun;Chung, Younshik
    • Communications for Statistical Applications and Methods
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    • v.27 no.2
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    • pp.189-199
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    • 2020
  • This paper studies a Bayesian ordered multiple linear regression model with skew normal error. It is reasonable that the kind of inherent information available in an applied regression requires some constraints on the coefficients to be estimated. In addition, the assumption of normality of the errors is sometimes not appropriate in the real data. Therefore, to explain such situations more flexibly, we use the skew-normal distribution given by Sahu et al. (The Canadian Journal of Statistics, 31, 129-150, 2003) for error-terms including normal distribution. For Bayesian methodology, the Markov chain Monte Carlo method is employed to resolve complicated integration problems. Also, under the improper priors, the propriety of the associated posterior density is shown. Our Bayesian proposed model is applied to NZAPB's apple data. For model comparison between the skew normal error model and the normal error model, we use the Bayes factor and deviance information criterion given by Spiegelhalter et al. (Journal of the Royal Statistical Society Series B (Statistical Methodology), 64, 583-639, 2002). We also consider the problem of detecting an influential point concerning skewness using Bayes factors. Finally, concluding remarks are discussed.

Bayesian Inference with Inequality Constraints (부등 제한 조건하에서의 베이지안 추론)

  • Oh, Man-Suk
    • The Korean Journal of Applied Statistics
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    • v.27 no.6
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    • pp.909-922
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    • 2014
  • This paper reviews Bayesian inference with inequality constraints. It focuses on ⅰ) comparison of models with various inequality/equality constraints on parameters, ⅱ) multiple tests on equalities of parameters when parameters are under inequality constraints, ⅲ) multiple test on equalities of score parameters in models for contingency tables with ordinal categorical variables.

Nonparametric Bayesian Multiple Comparisons for Dependence Parameter in Bivariate Exponential Populations

  • Cho, Jang-Sik;Ali, M. Masoom;Begum, Munni
    • 한국데이터정보과학회:학술대회논문집
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    • 2006.11a
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    • pp.71-80
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    • 2006
  • A nonparametric Bayesian multiple comparisons problem (MCP) for dependence parameters in I bivariate exponential populations is studied here. A simple method for pairwise comparisons of these parameters is also suggested. Here we extend the methodology studied by Gopalan and Berry (1998) using Dirichlet process priors. The family of Dirichlet process priors is applied in the form of baseline prior and likelihood combination to provide the comparisons. Computation of the posterior probabilities of all possible hypotheses are carried out through Markov Chain Monte Carlo method, namely, Gibbs sampling, due to the intractability of analytic evaluation. The whole process of MCP for the dependent parameters of bivariate exponential populations is illustrated through a numerical example.

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Comparative analysis of Bayesian and maximum likelihood estimators in change point problems with Poisson process

  • Kitabo, Cheru Atsmegiorgis;Kim, Jong Tae
    • Journal of the Korean Data and Information Science Society
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    • v.26 no.1
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    • pp.261-269
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    • 2015
  • Nowadays the application of change point analysis has been indispensable in a wide range of areas such as quality control, finance, environmetrics, medicine, geographics, and engineering. Identification of times where process changes would help minimize the consequences that might happen afterwards. The main objective of this paper is to compare the change-point detection capabilities of Bayesian estimate and maximum likelihood estimate. We applied Bayesian and maximum likelihood techniques to formulate change points having a step change and multiple number of change points in a Poisson rate. After a signal from c-chart and Poisson cumulative sum control charts have been detected, Monte Carlo simulation has been applied to investigate the performance of Bayesian and maximum likelihood estimation. Change point detection capacities of Bayesian and maximum likelihood estimation techniques have been investigated through simulation. It has been found that the Bayesian estimates outperforms standard control charts well specially when there exists a small to medium size of step change. Moreover, it performs convincingly well in comparison with the maximum like-lihood estimator and remains good choice specially in confidence interval statistical inference.

A Bayesian Criterion for a Multiple test of Two Multivariate Normal Populations

  • Kim, Hae-Jung;Son, Young-Sook
    • Communications for Statistical Applications and Methods
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    • v.8 no.1
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    • pp.97-107
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    • 2001
  • A simultaneous test criterion for multiple hypotheses concerning comparison of two multivariate normal populations is considered by using the so called Bayes factor method. Fully parametric frequentist approach for the test is not available and thus Bayesian criterion is pursued using a Bayes factor that eliminates its arbitrariness problem induced by improper priors. Specifically, the fractional Bayes factor (FBF) by O'Hagan (1995) is used to derive the criterion. Necessary theories involved in the derivation an computation of the criterion are provided. Finally, an illustrative simulation study is given to show the properties of the criterion.

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Comparison of tree-based ensemble models for regression

  • Park, Sangho;Kim, Chanmin
    • Communications for Statistical Applications and Methods
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    • v.29 no.5
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    • pp.561-589
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    • 2022
  • When multiple classifications and regression trees are combined, tree-based ensemble models, such as random forest (RF) and Bayesian additive regression trees (BART), are produced. We compare the model structures and performances of various ensemble models for regression settings in this study. RF learns bootstrapped samples and selects a splitting variable from predictors gathered at each node. The BART model is specified as the sum of trees and is calculated using the Bayesian backfitting algorithm. Throughout the extensive simulation studies, the strengths and drawbacks of the two methods in the presence of missing data, high-dimensional data, or highly correlated data are investigated. In the presence of missing data, BART performs well in general, whereas RF provides adequate coverage. The BART outperforms in high dimensional, highly correlated data. However, in all of the scenarios considered, the RF has a shorter computation time. The performance of the two methods is also compared using two real data sets that represent the aforementioned situations, and the same conclusion is reached.

Multiple Comparison for the One-Way ANOVA with the Power Prior

  • Bae, Re-Na;Kang, Yun-Hee;Hong, Min-Young;Kim, Seong-W.
    • Communications for Statistical Applications and Methods
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    • v.15 no.1
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    • pp.13-26
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    • 2008
  • Inference on the present data will be more reliable when the data arising from previous similar studies are available. The data arising from previous studies are referred as historical data. The power prior is defined by the likelihood function based on the historical data to the power $a_0$, where $0\;{\le}\;a_0\;{\le}\;1$. The power prior is a useful informative prior for Bayesian inference such as model selection and model comparison. We utilize the historical data to perform multiple comparison in the one-way ANOVA model. We demonstrate our results with some simulated datasets under a simple order restriction between the treatments.

Development of Performance Based Mix Design Method Using Single Parameter Bayesian Method (단일변수 Bayesian 방법을 이용한 성능중심형 배합설계법의 개발)

  • Kim, Jang-Ho Jay;Phan, Hung-Duc;Oh, Il-Sun;Lee, Keun-Sung
    • Journal of the Korea Concrete Institute
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    • v.22 no.4
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    • pp.499-510
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    • 2010
  • This paper presents a systematic approach for estimating material performance and designing mix proportion of concrete based on an application of Bayesian method in the form of satisfaction curves. The one-parameter satisfaction curve represents a satisfaction probability of a concrete performance criterion as a function of concrete material parameter. An analysis method to combine multiple satisfaction curves to form one unique satisfaction curve that can relate the performance of concrete to a single evaluating value called Goodness value is proposed. A proposed PBMD procedure and examples of application of the PBMD method for concrete mix proportion design are carried out to verify the validity of the proposed method. Finally, the comparison between the expected performance results of a concrete mix proportion designed using PBMD to the ACI estimation equation calculated results are performed to check the applicability of the method to actual construction.

Multiple Comparisons for a Bivariate Exponential Populations Based On Dirichlet Process Priors

  • Cho, Jang-Sik
    • Journal of the Korean Data and Information Science Society
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    • v.18 no.2
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    • pp.553-560
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    • 2007
  • In this paper, we consider two components system which lifetimes have Freund's bivariate exponential model with equal failure rates. We propose Bayesian multiple comparisons procedure for the failure rates of I Freund's bivariate exponential populations based on Dirichlet process priors(DPP). The family of DPP is applied in the form of baseline prior and likelihood combination to provide the comparisons. Computation of the posterior probabilities of all possible hypotheses are carried out through Markov Chain Monte Carlo(MCMC) method, namely, Gibbs sampling, due to the intractability of analytic evaluation. The whole process of multiple comparisons problem for the failure rates of bivariate exponential populations is illustrated through a numerical example.

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