• Title/Summary/Keyword: ANOSIM

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Spatio-temporal Variations in Species Composition and Abundance of Larval Fish Assemblages in the Nakdong River Estuary, Korea (낙동강 하구역 부유성 자치어 종조성의 시·공간 변동)

  • Choi, Hee Chan;Park, Joo Myun;Huh, Sung Hoi
    • Korean Journal of Ichthyology
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    • v.27 no.2
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    • pp.104-115
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    • 2015
  • The species composition of larval fish assemblages in the Nakdong River estuary, Korea, was determined using monthly samples collected between September 2010 and August 2011 at two stations. A total of forty three larval species were collected during the study. Among forty three taxa of fish larvae, summer gobies, Clupea pallasii, Engraulis japonicus, spring gobies, Konosirus punctatus, winter gobies, Sardinops melanostictus, Coilia nasus were dominant taxa, and these eight taxa accounted for 95.0% in the total number of individuals. Species composition and abundance varied greatly spatio-temprally showing the peak abundances of fish larvae in August 2011, and a few fish larvae were occurred in November 2010. Cluster analysis based on the number of individuals of fish larvae showed that 21 month-station sampling units were classified into five groups at the similarity level of 50%, and the results of ANOSIM and SIMPER analysis revealed significant differences in community structure among five groups.

Feeding Habits of Juvenile and Young Yellow Tail Seriola quinqueradiata in Coastal Waters of the South Sea, Korea (한국 남해안에 출현하는 방어(Seriola quinqueradiata) 치어 및 유어의 식성)

  • Jeong, Jae-Mook;Hwang, Kang-Seok;Song, Se-hyun;Kim, Hee-yong;Park, Jeong-Ho;Lee, Jung-Hoon
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.49 no.5
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    • pp.635-641
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    • 2016
  • The feeding habits of juvenile and young Seriola quinqueradiata, which were collected by a hand net and set net in coastal waters of the South Sea during the period from June to August 2014 and 2015, were analyzed. The size range of juveniles was 4.9-10.9 cm FL, and that of young S. quinqueradiata was 11.0-20.4 cm FL. Important prey items in the diets of juveniles were euphausiacea and copepoda, dominated by the Euphausia sp., Paracalanus sp. and Calanus sinicus while the diets of the young consisted mainly of pisces, dominated by Engraulis japonicus, Trachurus japonicus. Stomach content compositions differed significantly among body size levels in both the juveniles and young (ANOSIM, P<0.05). With increasing size, the mN/ST constantly decreased while the mW/ST constantly increased (one-way ANOVA). Graphical analysis of the diet composition showed that juvenile S. quinqueradiata are generalized feeders, young is a specialized feeders characterized by strong individual feeding specialization.

Effect of geography and altitude on the community characteristics of epigeic spiders in rice field levees (지형 및 고도에 따른 토양성 논거미 군집특성)

  • Eo, Jinu;Kim, Myung-Hyun;Kim, Min-Kyeong;Choi, Soon-Kun
    • Korean Journal of Environmental Biology
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    • v.38 no.4
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    • pp.594-602
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    • 2020
  • This study investigated the effect of geography and altitude on epigeic spider communities in rice field levees in Jeollabuk-do. Spider communities in the mountainous and plain areas were compared to determine the effect of geography on the cultivation periods. The effect of altitude was compared between the Jeongeup and Jangsu areas during non-cultivation periods. Analysis using nMDS (non-metric multidimensional scaling), MRPP (multiple response permutation procedure), and ANOSIM (analysis of similarity) revealed differences in spider community structures between the two types of study areas. Lycosidae predominated at the family level, and its abundance was greater in the mountainous area than in the plains area. The total abundance did not differ between the two areas with different altitudes, but the abundance of three Pardosa species was greater at lower altitudes than at higher altitudes. Geography and altitude had a minimal effect on species richness and diversity indices at the community level. However, several Lycosidae species showed species-specific responses to both geography and altitude in the rice fields.

Dietary supplementation of solubles from shredded, steam-exploded pine particles modulates cecal microbiome composition in broiler chickens

  • Chris Major Ncho;Akshat Goel;Vaishali Gupta;Chae-Mi Jeong;Ji-Young Jung;Si-Young Ha;Jae-Kyung Yang;Yang-Ho Choi
    • Journal of Animal Science and Technology
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    • v.65 no.5
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    • pp.971-988
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    • 2023
  • This study evaluated the effects of supplementing solubles from shredded, steam-exploded pine particles (SSPP) on growth performances, plasma biochemicals, and microbial composition in broilers. The birds were reared for 28 days and fed basal diets with or without the inclusion of SSPP from 8 days old. There were a total of three dietary treatments supplemented with 0% (0% SSPP), 0.1% (0.1% SSPP) and 0.4% (0.4% SSPP) SSPP in basal diets. Supplementation of SSPP did not significantly affect growth or plasma biochemicals, but there was a clear indication of diet-induced microbial shifts. Beta-diversity analysis revealed SSPP supplementation-related clustering (ANOSIM: r = 0.31, p < 0.01), with an overall lower (PERMDISP: p < 0.05) individual dispersion in comparison to the control group. In addition, the proportions of the Bacteroides were increased, and the relative abundances of the families Vallitaleaceae, Defluviitaleaceae, Clostridiaceae, and the genera Butyricicoccus and Anaerofilum (p < 0.05) were significantly higher in the 0.4% SSPP group than in the control group. Furthermore, the linear discriminant analysis effect size (LEfSe) also showed that beneficial bacteria such as Ruminococcus albus and Butyricicoccus pullicaecorum were identified as microbial biomarkers of dietary SSPP inclusion (p < 0.05; | LDA effect size | > 2.0). Finally, network analysis showed that strong positive correlations were established among microbial species belonging to the class Clostridia, whereas Erysipelotrichia and Bacteroidia were mostly negatively correlated with Clostridia. Taken together, the results suggested that SSPP supplementation modulates the cecal microbial composition of broilers toward a "healthier" profile.

Distribution of Larval Fishes off the East Sea, Korea (동해 근해에 출현하는 어류 자치어 분포 특성)

  • Choi, Hee Chan;Jung, Hae Kun;Cho, Jeong Hyun;Youn, Seok Hyun;Oh, Hyun Ju
    • Korean Journal of Ichthyology
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    • v.34 no.3
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    • pp.186-200
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    • 2022
  • In order to understand the species composition and distribution characteristics of larval assemblages in the East Sea, Korea, larvae were collected at 13 stations every other month from February to December 2018. Fish larvae were identified through DNA barcoding along with morphological methods, and as the result, a total of 104 taxonomic groups appeared during the survey. Among these, Engraulis japonicus, which accounted for 76.2% of the total population, was the most dominant species, followed by Maurolicus japonicus, which accounted for 15.0%. In addition, Ammodytes personatus, Champsodon snyderi, Scomber japonicus and Echelus uropterus appeared more frequently than other taxa. The above six species accounted for 93.2% of the total catch. The number of taxa and the amount of larvae collected in the survey area were higher during the high water temperature periods (June to October) than during the low water temperature periods (February, April and December). Analysis of similarity (ANOSIM) showed a statistically significant difference in monthly larval assemblages. The results of the canonical correspondence analysis (CCA) show that the distributions of larval community were mainly affected by sea surface temperature during low water temperature periods, and various environmental factors such as salinity, dry weight of zooplankton, and the concentrations of nutrients during high water temperature periods.

The Community Structure of Meiofauna in Marian Cove, King George Island, Antarctica (남극 킹조지섬 마리안소만의 중형저서동물 군집구조)

  • Hong, Jung-Ho;Kim, Ki-Choon;Lee, Seung-Han;Back, Jin-Wook;Lee, Dong-Ju;Lee, Won-Choel
    • Ocean and Polar Research
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    • v.33 no.3
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    • pp.265-280
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    • 2011
  • The temporal dynamics of the meiofauna community in Marian Cove, King George Island, Antarctica were observed from March 7 to December 21 2007. Nine meiofauna taxa were found, with nematodes the most dominant group, making up 92.97% of the total meiofauna density, followed by harpacticoid copepods (3.18%). Meiofauna abundance ranged from 123 to 874 individuals per 10 $cm^2$ (mean 464 inds.10 $cm^{-2}$), which is lower than that found in some polar and temperate regions. The lowest meiofauna abundance was found in the 26th April sample (III) and the highest meiofauna abundance was found in the March 23rd sample (II). There was no correlation between meiofauna abundance and season. The seasonal changes were likely caused by meltwater runoff, and there were the physical disturbances on the bottom sediment by huge iceberg. Biomass of meiofauna varied between 20.36 and 101.02 ${\mu}gC{\cdot}10\;cm^{-2}$, and overall mean biomass was 54.17 ${\mu}gC{\cdot}10\;cm^{-2}$ during the study periods. More than 80% of meiofauna was concentrated in the upper 2 cm of the sediment, and density decreased with depth. The mean diversity index was 0.37, and the ratio between the abundance of nematodes: and harpacticoids (N/C) ratio ranged from 7.31 to 95.04 (mean 26.39). NMDS analysis divided the community into three groups: A (III, IV, V, VII, VIII), B (II, IX, XI, XII) and C (I, V, X). The results of ANOSIM and SIMPER analysis revealed significant differences in community structure among three groups and major contributed meiofauna taxon in grouping were nematodes and copepods. No significant correlations were observed between major meiofauna taxon and environmental factors. Thirteen species in 12 genera representing nine families of harpacicoids were recorded. Ancorabolidae was the most diverse family, and Heteropsyllidae was the most abundant. The correlation analysis between benthic harpacticoid copepods and environmental factors showed that some species were affected by water temperature, sediment temperature, salinity, chlorophyll a concentration, grain size of the sediments and heavy metal contents of the sediments. These data describe the usefulness of benthic harpacticoid copepods as biological indicator species in Antarctic regions.

Comparison of Community Structure of Fish Larvae in the Northern East China Sea in Normal and El Niño/La Niña Periods (엘리뇨/라니냐와 정상 기간 동중국해 북부해역의 자치어의 군집구조 비교)

  • Yoo, Joon-Taek;Choi, Jung-Hwa;Kim, Jin-Yeong;Kim, Jong-Bin;Choi, Kwang-Ho
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.46 no.6
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    • pp.907-916
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    • 2013
  • The aim of this study was to compare community structure of larval fish species in the northern East China Sea during normal meteorological conditions in autumn 2009, during the El Ni$\tilde{n}$o period in 2009-2010, and during the La Nina period in 2010. Fifty taxa were recorded during the study period; the most dominant species were Benthosema pterotum and Gobiidae spp. In October 2008 during the normal period, warm water from the Tsushima Warm Current (TWC) intruded more into the surface and middle layers, and cold water affected by the Yellow Sea Cold Water (YSCW) intruded into the bottom layer. In October 2009 during the El Ni$\tilde{n}$o period, intrusion of the China Coastal Water (CCW), which has low salinity (<32.2 psu), was more apparent than intrusion of the TWC or YSCW. In October 2010 during the La Nina period, intrusion of the TWC and CCW was relatively weak, resulting in the lowest temperature and highest salinity observed during the study period in the eastern part of the study area. Hierarchical cluster, one-way ANOSIM (analysis of similarities), and SIMPER (similarity-percentages procedure) analyses provided two main results. First, the abundance of the most dominant larval fish species in autumn of the normal period was greater than that in autumn of the El Ni$\tilde{n}$o/La Nina periods, resulting in a significant difference in ichthyoplankton community structure between the periods. The abundance of Benthosema pterotum increased in the normal period, possibly influenced by the intrusion of cold water from the YSCW; the abundance of species residing in Korean waters (e.g., Gobiidae spp.) probably decreased during the El Ni$\tilde{n}$o/La Nina periods. The second finding was that the abundance of subtropical larval fish in autumn of the normal period was generally larger than that during autumn of the El Ni$\tilde{n}$o/La Nina periods. This could have been induced by the stronger intrusion of warm water from the TWC during the normal period. Although differences in oceanographic conditions between El Ni$\tilde{n}$o and La Nina periods were observed, the differences in ichthyoplankton community structure between the two periods were not significant.

Characteristics of Fish Communities and Length-weight Relationships of Dominant Species (Zacco platypus) in Seomjin River (섬진강 수계 어류군집 특성과 우점종 피라미(Zacco platypus)의 전장 - 체중 관계 분석)

  • Lee, Sun Ho;Kim, Hyo Gyeom;Jo, Hyunbin;Kwak, Ihn-Sil
    • Korean Journal of Ecology and Environment
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    • v.54 no.1
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    • pp.12-23
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    • 2021
  • As fish communities are sensitive to natural environmental changes as well as anthropogenic pressures, their composition and characteristics help us to assess the aquatic ecosystem health. The fish fauna and the length-weight relationship of Zacco platypus in the Seomjin River system were investigated from July 2018 to May 2019. The collected species during the survey period were 49 species belong to 14 families including 19 Korean endemic and two endangered species. According to Bray-Curtis similarities, 14 sites were divided into four groups based on the fish community composition; two groups(group A, B) and two uncategorized sites(group C, D). There were significant differences between groups A and B(analysis of similarities, R=0.722, p=0.002). A similarity percentage analysis revealed that Z. koreanus(8.55%), Micropterus salmoides(6.90%), and Lepomis macrochirus (4.90%) contributed to these differences of fish assemblages between group A and B. Group A showed higher relative abundances of exotic species such as M. salmoides and L. macrochirus, while Z. platypus and Z. koreanus which are the common species in Korea, were the most dominant species in group B. Based on the length-weight relationship of Z. platypus, b values were varied from 2.82 to 3.80, indicating that growth patterns of the species were spatially different. This study could be served as baseline data for understanding fish fauna, assessing habitat characteristics based on the fauna, and identifying health conditions of Z. platypus in the Seomjin River system.