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Evaluation of Commercial Complementary DNA Synthesis Kits for Detecting Human Papillomavirus (인유두종바이러스 검출을 위한 상용화된 cDNA 합성 키트의 평가)

  • Yu, Kwangmin;Park, Sunyoung;Chang, Yunhee;Hwang, Dasom;Kim, Geehyuk;Kim, Jungho;Kim, Sunghyun;Kim, Eun-Joong;Lee, Dongsup
    • Korean Journal of Clinical Laboratory Science
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    • v.51 no.3
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    • pp.309-315
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    • 2019
  • Cervical cancer is the fourth most common malignant neoplasm in women worldwide. Most cases of cervical cancer are caused by an infection by the human papillomavirus. Molecular diagnostic methods have emerged to detect the HPV for sensitivity, specificity, and objectivity. In particular, real-time PCR has been introduced to acquire a more sensitive target DNA or RNA. RNA extraction and complementary DNA synthesis are proceeded before performing real-time PCR targeting RNA. To identify an adequate and sensitive cDNA synthesis kit, this study evaluated the two commonly used kits for cDNA synthesis. The results show that the $R^2$ and efficiency (%) of the two cDNA synthesis kits were similar in the cervical cancer cell lines. On the other hand, the Takara kit compared to Invitrogen kit showed P<0.001 in the $10^2$ and $10^3$ SiHa cell count. The Takara kit compared to the Invitrogen kit showed P<0.001 in the $10^1$ and $10^2$ HeLa cell count. Furthermore, 8, 4, 2, 1, and 0.5 ml of forty exfoliated cell samples were used to compare the cDNA synthesis kits. The Takara kit compared to the Invitrogen kit showed P<0.01 in 8, 4, and 1 ml and P<0.05 in 0.5 mL. The study was performed to identify the most appropriate cDNA synthesis kit and suggests that a cDNA synthesis kit could affect the real-time PCR results.

Effect of Medium Composition and Growth Regulators on Mass Propagation of Virus-Free Plant from the Meristem Cultures of 'Jarang' Grape ('자랑' 포도 생장점 배양으로부터 무병주 식물 대량번식에 미치는 배지 구성물질과 생장 조절제의 영향)

  • Lee, Jae Wung;Lee, Yun Sang;Hong, Eui Yon;Lee, Seok Ho;Kim, Hong Sik;Kim, Hag Hyun
    • Korean Journal of Plant Resources
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    • v.26 no.2
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    • pp.303-309
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    • 2013
  • This study was performed to clarify the effect of medium compositions and plant growth regulators on the shoot, root formation and growth of 'Jarang' grape for mass propagation of virus-free plant. The formation and growth of shoot were considerably favorable in half-concentration of MS medium. However, the formation of adventitious root per explants (avg. 2.1) was effective in higher concentration (two times) of MS medium. For sucrose concentration, 1% for the shoot formation, 3% for the adventitious root formation and 1% for the growth were observed as yield significant results. With the addition of 0.05% of activated carbon, the shoot growth was improved, and it was effective for the adventitious root formation and growth as well. A pH of 6.8 in the medium was the most suitable for mass propagation; the results showed significant enhancement in the number of nodes and the length of the shoot, 3.9 and 1.3 cm, respectively. The shoot growth was the most vigorous in BA 1.0 mg/L due to the impact of the growth regulator on the mass propagation in it. Consequently, 16.9 shoots per explant were formed in NAA 1.0 mg/L so good results were obtained.

Cytotoxicity of Extracts and Fractions from Echinacea pupurea L. on Human Cancer Cells (Echinacea purpurea L. 추출물 및 분획물의 암세포 독성)

  • Park, Jin-Hong;Lee, Mi-Kyoung;Mun, Hyung-Chul;Choi, Geun-Pyo;Lee, Seo-Ho;Lee, Hyeon-Soo;Ryu, Lee-Ha;Lee, Gang-Yoon;Lee, Hyeon-Yong
    • Korean Journal of Medicinal Crop Science
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    • v.12 no.4
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    • pp.309-314
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    • 2004
  • The cytotoxic effects of water and ethanol extracts of Echinacea purpurea (L.) (EP) and chloroform, ethyl acetate, butanol and aqueous fractions from each extract of EP were examined. Every extract and fraction of EP inhibited the growth of human hepatocarcinoma, human gastric cancer cell, human breast cancer cells and human lung carcunoma in concentration-dependent manners over a concentration range of $0.05{\sim}1.0\;mg/ml$. Most extracts and fractions with the concentraction of 1 mg/ml showed strong inhibition of more than 70% for every cancer cell. Only aqueous fractions of each extract showed very weak inhibitons of 12 to 25% on the growth of human normal lung cell with the concentration of 1 mg/ml. Overall selectivity of the extrats and fractions on the four human cancer cell lines was over 2.5. These results indicate that EP has a very potent selective toxicity for cancer cells.

Comparison of Steel Slag and Activated Carbon for Phosphate Removal from Aqueous Solution by Adsorption (폐수 내 인 흡착 제거를 위한 제강슬래그와 활성탄 비교)

  • Lee, Seung-Han;Kim, Chang-Kyu;Park, Jung-Geun;Choi, Dong-Kwang;Ahn, Johng-Hwa
    • Journal of Korean Society of Environmental Engineers
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    • v.39 no.5
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    • pp.303-309
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    • 2017
  • This study investigated the potential use of steel slag (SS) (0.5~2.0 g/200 mL) for the removal of phosphate from wastewater compared with activated carbon (AC) (3.0~6.0 g/200 mL). The adsorption equilibrium data were best represented by Langmuir isotherm and its calculated maximum adsorption capacity was 91 mg/g for SS, 27 mg/g for AC. The adsorption kinetics was found to follow the pseudo-second order kinetics model and its rate constant was $0.0232{\sim}0.1357g/mg{\cdot}min$ for SS, $0.0247{\sim}0.1221g/mg{\cdot}min$ for AC. The overall uptake for the SS and AC was maximum at pH 2. Therefore, it can be concluded that steel slag could play an effective role in reducing phosphate concentration compared with activated carbon.

Functional Biological Activity of Hot Water and Ethanol Extracts from Taraxaci Herba (포공영의 열수 및 에탄올 추출물의 기능적 생리활성)

  • Lim, Ae-Kyung;Kim, Jung-Ok;Jung, Mee-Jung;Jung, Hee-Kyoung;Hong, Joo-Heon;Kim, Dae-Ik
    • Journal of the Korean Society of Food Science and Nutrition
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    • v.37 no.10
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    • pp.1231-1237
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    • 2008
  • This study was conducted to investigate the functional biological effects of hot water and ethanol extracts from Taraxacum mongolicum (TM). Then, the hot water and ethanol extracts of TM were measured for total flavonoids content, total phenolics content, electron donating ability, nitrite-scavenging ability, SOD-like activity, tyrosinase inhibitory effect, and elastase inhibitory effect. Total flavonoids contents of hot water and ethanol extracts from TM were 7.80$\pm$0.97 mg/g and 9.12$\pm$0.51 mg/g, respectively, and total phenolics contents were estimated as 54.20$\pm$1.95 mg/g for water extract and 79.43$\pm$4.44 mg/g for ethanol extract. The $RC_{50}$ values for electron donating ability of hot water and ethanol extracts were 943.98 $\mu$g/mL and 309.41 $\mu$g/mL. SOD-like activity and nitrite-scavenging ability were dependent on concentration of hot water and ethanol extracts, and the activity of ethanol extract was higher than that of hot water extract. However, hot water and ethanol extracts from TM showed no inhibitory activities on the elastase and tyrosinase inhibitory activities. Based on the above results, the ethanol extract of TM seems to be the most pertinent for use as functional food and cosmetic.

Amino Acid Composition and characteristic of dissolved organic Compounds in the Yellow Sea (황해의 용존 유기물 특성 및 아미노산 조성)

  • 박용철;윤철호
    • 한국해양학회지
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    • v.29 no.2
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    • pp.171-182
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    • 1994
  • Dissolved free amino acid (DFAA) dissolved hydrolyzable amino acid (DHAA) and D/L amino acid racemic ratio in the dissolved organic compounds were studied to investigate the biogeochemical characteristics of dissolved organic compound in the Yellow Sea. Concentration of total DFAA ranged from 0.06 uM to 0.26 uM in the study area. DFAA composition showed that aspiratae, glutamate, serine, glycine and alanine were predominant. According to characteristics of functional group of amino acid, these belonged to hydroponic group. C-18 short column cartridge (Sep-Pak) activated by methanol was used to extract organic macromolecules in the seawater. In operational scheme, macromolecules were divided into two fractions. Geomacromolecule fraction eluted with 50% methanol was used to extract organic macromolecules in the seawater. In operational scheme, macromolecules were divided into two fractions. Geomacromolecule fraction eluted with 50% methanol was moderately hydrophilic and showed characteristics of humic substance in the seawater. Biomacromolecule fraction eluted with 100% methanol was hydrophobic and most abundant in the surface seawater samples. DHAA was much higher than DFAA in this study area. DHAA ranged from 2.05 uM to 6.19 uM in the B-fraction and from 8.13 uM to 24.46 uM in the G-fraction. DHAA was higher in the surface water than in the bottom water where the vertical stratification developed well. The result of HPLC analysis of D/L amino acid showed that low racemic ratio was found in the B-fraction. It implies that the B-fraction is relatively younger than the G-fraction and freshly derived from biosphere.

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A Charecteristics of Marine Environments in a Blood Cockle Farm of the Northwestern Yeoja Bay, Korea. 1. Spatio-temporal Distributions of Chlorophyll a Concentration, Particulate Organic Carbon & Nitrogen (여자만 북서부 꼬막양식어장의 해양환경 특성. 1. 먹이생물로서 Chlorophyll a 농도, 입자태 유기탄소 및 유기질소의 시·공간적 분포 특성)

  • Yoon, Yang Ho
    • Journal of the Korea Academia-Industrial cooperation Society
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    • v.20 no.7
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    • pp.299-309
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    • 2019
  • This study was designed to assess the quality and quantity of food resources such as the chlorophyll a concentration (Chl-a), the particulate organic carbon (POC) and the particulate organic nitrogen (PON), on blood cocke (Tegillarca granosa Linnaeus) farms from May to November 2017 in the northwestern area of Yeoja Bay, Korea. The values of Chl-a, POC and PON were $1.69-7.68{\mu}g{\cdot}L^{-1}$ (average: $3.48{\mu}g{\cdot}L^{-1}$ in the surface), 0.88-2.58 mM (average: 1.97 mM) and 0.17-0.90 mM (average: 0.54 mM), respectively, and these values were higher in the spring and summer and lower in the autumn. Furthermore, Chl-a and POC had higher values on the bottom layer than those vales on the surface, while PON had higher values on the surface than those values on the bottom. The POC/PON ratio and POC/Chl-a ratio were 1.56-7.88 (average: 3.71 on the surface of the water) and 216-967 (average: 700 on the bottom of the water), respectively, with most of the carbon sources being sediment-accumulated particle organic matter, and the contribution by phytoplankton was assessed as being low. These results show that the food source of the blood cockle farms in the northwest area of Yeoja Bay seems to be abundant in quantity, but this is considered to be very poor in quality.

Studies on the Variation of Vegetation and Rice Root Formation Accompanied with the Desaltation at the Reclaimed! Tidal Fields (간척지의 제염정도에 따른 식생의 변이의 수도근모형성에 관한 연구)

  • Kwon. H.J.;Chung, W.I.;Cho, J.Y.
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.28 no.3
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    • pp.305-309
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    • 1983
  • To know the effect of desaltation in the reclaimed tidal fields on the succession of vegetation and on the root hair formation of paddy rice, reclaimed fields in Kang Hwa Island, Nam-Yang Bay and Ke-Hwa Island were investigated during summer crop season in 1982. The obtained results can be summarized as followings. l) In the highly salty and water logged areas of reclaimed tidal fields, the first dominating species of higher plant were observed to be Salicornia herbacea L. and Suaeda japonica Makino. With the continued desaltation, Chemopodium virgatum Thumb. occurred in the vegetation. After this transition, the dominating species were composed of Scirpus maitimus L. and Phragmites communis Trin. At the S. maitimus and P. communis dominating salinity level, rice cultivation was safe from the salt damage. 2) In the water logged area, Artemisia capillaria Thunb. and Aster tripolium L. took the place of dominating species after S. herbacea and S. japonica. At this salinity level, graminaceous weeds began to immigrate. 3) In dry areas, Suaeda asparagoides Makino and Suaeda maritima were the first appearing dominant species. Atriplex subcordata Kitakawa was also observed in sucy dry areas, but colony formation was not observed. 4) Plants immigrated slowly into dry areas from the already vegetated water logged areas with the continuation of desaltation. 5) The high soil salinity level affected the root hair formation of rice by reducing both the rate of root hair formation and the length of root hairs.

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Clinical impact of pleural fluid carcinoembryonic antigen on therapeutic strategy and efficacy in lung adenocarcinoma patients with malignant pleural effusion

  • Jaehee Lee;Deok Heon Lee;Ji Eun Park;Yong Hoon Lee;Sun Ha Choi;Hyewon Seo;Seung Soo Yoo;Shin Yup Lee;Seung-Ick Cha;Jae Yong Park;Chang Ho Kim
    • The Korean journal of internal medicine
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    • v.39 no.2
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    • pp.318-326
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    • 2024
  • Background/Aims: Epidermal growth factor receptor (EGFR) mutation is important in determining the treatment strategy for advanced lung cancer patients with malignant pleural effusion (MPE). Contrary to serum carcinoembryonic antigen (S-CEA) levels, the associations between pleural fluid CEA (PF-CEA) levels and EGFR mutation status as well as between PF-CEA levels and treatment efficacy have rarely been investigated in lung adenocarcinoma patients with MPE. Methods: This retrospective study enrolled lung adenocarcinoma patients with MPE and available PF-CEA levels and EGFR mutation results. The patients were categorized based on PF-CEA levels: < 10 ng/mL, 10-100 ng/mL, 100-500 ng/mL, and ≥ 500 ng/mL. The association between PF-CEA levels and EGFR mutation status as well as their therapeutic impact on overall survival was compared among the four groups. Results: This study included 188 patients. PF-CEA level was found to be an independent predictor of EGFR mutation but not S-CEA level. The EGFR mutation rates were higher as the PF-CEA levels increased, regardless of cytology results or sample types. Among EGFR-mutant lung adenocarcinoma patients receiving EGFR-tyrosine kinase inhibitor (TKI) treatment, those with high PF-CEA levels had significantly better survival outcomes than those with low PF-CEA levels. Conclusion: High PF-CEA levels were associated with high EGFR mutation rate and may lead to a favorable clinical outcome of EGFR-TKI treatment in EGFR-mutant lung adenocarcinoma patients with MPE. These findings highlight the importance of actively investigating EGFR mutation detection in patients with suspected MPE and elevated PF-CEA levels despite negative cytology results.

The Comparison of Chemical Compounds in Korean and Chinese Sesame Seeds" (한국산 및 중국산 참깨의 화학성분 비교)

  • 권영주;이정일;등개야;성창근;오만진
    • Food Science and Preservation
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    • v.6 no.2
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    • pp.194-199
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    • 1999
  • Sesame samples used in this study were Korean variety cultivated in Chochiwon City of Korea (KvKc), Chinese variety cultivated in Jilin Province of China(CvCc), Chinese variety cultivated in Chochiwon city of Korea(CvKc) and Korean variety cultivated in Jilin Province of China(KvCc). The extraction yields of sesame oils from KvKc, CvCc, CvKc and KvCc were 47.8%, 48.1%, 48.6% and 49.3% respectively. The color value (L value) of sesame oil from KvKc was lower than that of CvCc and KvKc sesame oil showed dark brown color. The composition of neutral lipid, glycolipid and phospholipid of free lipids from KvKc and U sesame oils were 93.1%, 6.6%, 0.2% and 94.7%, 4.6%, 0.8% respectively. Major fatty acids of KvKc and CvCc sesame were usaturated fatty acids, such as oleic and linoleic acid. Total composition of the two major fatty acids of KvKc was 84.6% which was almost same with that of CvCc. However the composition of oleic and linoleic acid of KvKc were 47.1% and 37.5%, while the composition of CvCc were 40.5% and 44.3%. When cross-cultivated, the composition of oleic and linoleic acid of CvKc were 41.0% and 43.5%, while the composition of KvCc were 42.0% and 43.7%. The contents of total amino acids and essential amino acids of KvKc were 713 mg% and 309 mg%, which were much higher than those of CvCc. When cross-cultivated, the content of total amino acids of KvCc was 44% lower than that of KvKc while the content of total amino acids of CvKc was 36% higher than that of CvCc.

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