• 제목/요약/키워드: 1D SDS-PAGE

검색결과 216건 처리시간 0.023초

Identification of Granule Bound Starch Synthase (GBSS) Isoforms in Wheat

  • Seo, Yong-Weon;Hong, Byung-Hee;Ha, Yong-Woong
    • 한국작물학회지
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    • 제43권2호
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    • pp.89-94
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    • 1998
  • Granule bound starch synthase (GBSS), also known as the '"waxy protein'", is responsible for the synthesis of amylose in the amyloplasts of cereal crops. In hexaploid wheat (Triticum aestivum L.), GBSS is involved in amylose synthesis and rolls as an important factor to determine flour quality and end-use quality in food products. Genes on three Wx loci have been found to encode GBSS in common wheats. We developed techniques for the purification and separation of GBSS in wheat. Three major GBSS isoforms, which were encoded by the genes on three loci, Wx-A1, Wx-B1, and Wx-D1 migrating differently by one dimensional SDS-po-lyacrylamide gel electrophoresis (1D SDS-PAGE), were identified. GBSS from 66 Korean hard and soft winter wheats were purified and determined for their Wx loci and four of them were identified possessing a null allele either at the Wx-A1 and Wx-B1 loci. With help of identification of three GBSS isoforms using 1D SDS-PAGE system, we are able to identify and monitor Wx gene expressions in breeding materials for developing waxy or partial waxy wheats without experiencing consecutive selecting generations.cting generations.

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Electrophoretic and Immunological Evaluation of Secalin in Rye, Triticale, and Wheat-Rye Translocation Wheat

  • Seo, Yong-Weon;Hong, Byung-Hee
    • 한국작물학회지
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    • 제43권4호
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    • pp.228-233
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    • 1998
  • Seed storage proteins have been used for studying biochemical genetics and end-use quality aspects. We conducted enzyme-linked immunosorbent assay (ELISA) and one-dimensional SDS-PAGE (1D SDS-PAGE) to evaluate different cereal crop species and Korean wheat lines for rye secalin proteins. The antisecalin antibody showed consistent specificity for rye secalin with little cross-reactivity to gliadins. Immunological cross-reactivities measured by the ELISA technique using competition assay showed significant differences of absorbance among rye, triticale, wheat-rye translocated wheat and non-translocated wheat. The absorbance values were lowest in rye followed by triticale, translocated wheat and non-translocated wheat. The ELISA for discrimination of wheat-rye translocation on the basis of antigen-antibody reactivity showed that none of the Korean wheat lines possessed 1RS and secalin proteins. The competitive ELISA experiment demonstrated specific determination for secalin that was originated from rye chromosomal parts. The result of 1D SDS-PAGE for identifying rye secalin subunits showed all three rye specific secalin protein subunits (75 KDa, 45 KDa, and 40 KDa) for rye and triticale, and 1RS specific secalins (45 KDa and 40 KDa) for 1AL/1RS and 1BL/1RS translocated wheats. All Korean wheats were lacking 1RS of rye chromosome and secalin.

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TNT에 대한 세균의 반응기작: 생존율, 스트레스 유도단백질의 SDS-PAGE 및 2-D 전기영동 분석 (Responses of Bacteria to TNT: Cells′Survival, SDS-PAGE and 2-D Electrophoretic Analyses of Stress-Induced Proteins)

  • 오계헌;장효원;강형일;김승일
    • 미생물학회지
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    • 제38권2호
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    • pp.67-73
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    • 2002
  • 폭약 2,4,6-trinitrotoluene (TNT)스트레스 조건하에서 토양세균 Pseudomonas sp. HK-6의 세포반응에 대하여 조사하였다. 다양한 농도의 TNT에 노출됨으로서 약 70-kDa DnaK와 60-kDa GroEL의 스트레스 충격단백질 (stress shock proteins, SSPs)이 단떠질이 유도되었다. 이들 SSPs의 존재는 SDS-PAGE과 anti-DnaK와 anti-GroEL monoclonal antibodies를 이용한 Western bolt을 통하여 확인되었다. SSPs은 0.5 mM TNT로 6-12 시간 처리된 세포에서 나타났으며, TNT에 노출 후8시간대 에서 최대의 단백질 유도가 관찰되었다. $30^{\circ}C$에서 $42^{\circ}C$로 열변환충격을 주었을 때의 SSPs는 TNT노출에서와 유사한 유도양상을 보여주었다. TNT에 노출된 Pseudomonas sp. HK-6세포에서 유도된 SSPs의 존재는 배양된 세포의 수용성 단백질 분획에 대하여 2-D PAGE를 통하여 확인되었다. Coomassie brilliant blue R25O로 염색된 젤로부터 pH 3-10 범위에서 약 450 개의 spots이 탐침되었으며, 이들 가운데 12 개의 spots이 TNT 스트레스에 대하여 현저하게 유도되었다. Gel상에서 가장 짙게 나타난 대표적 인 spot에 대한 N-말단 아미노산 서열을 분석한 결과, $^1XXAKDVKFGDSARKKML^17$로서, Pseudomonas putida의 GroEL의 N-말단 아미노산 염기서열인 $^1XXAKDVKFGDSARKKML^17$과 동일한 것으로 분석되었다.

녹두의 하배축에서 분리한 Soluble Acid Invertase의 정제와 특성 (Purification and Characterizationof Soluble Acid Invertase from the Hypocotyls of Mung Bean (Phaseolus radiatus L.))

  • Young-Sang Kim
    • Journal of Plant Biology
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    • 제38권3호
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    • pp.251-258
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    • 1995
  • The soluble acid invertase ($\beta$-D-fructofuranoside fructohydrolase, EC 3.2.1.26) was isolated and characterized from the hypocotyls of mung bean (Phaseolus radiatus L.). The enzyme was purified to apparent homogeneity by consecutive step using diethylaminoethyl (DEAE)-cellulose anion exchange, Concanavalin (Con) A affinity and Sephacryl S-300 chromatography. The overall purification was about 148-fold with a yield of about 15%. The finally purified enzyme exhibited a specific activity of about 139 $\mu$mol of glucose produced mg-1 protein min-1 at pH 5.0 and appeared to be a single protein by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and nondenaturing PAGE. The enzyme had the native molecular weight of 70 kD and subunit molecular weight of 70 kD as estimated by Sephadex G-200 chromatography and SDS-PAGE, respectively, suggesting that the enzyme was composed of a monomeric protein. On the other hand, the enzyme appeared to be a glycoprotein containing N-linked high mannose oligosaccharide chain on the basis of its ability to bind to the immobilized C on A. The enzyme had a Km for sucrose of 1.8 mM at pH 5.0 and maximum activity around pH 5.0. The enzyme showed highest enzyme activity with sucrose as substrate, but the activity was slightly measured with raffinose and cellobise. No activity was measured with maltose and lactose. These results indicate the soluble acid invertase is a $\beta$-fructofuranosidase.

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Purification and In Vitro Translation of Penicillium verruculosum Cellulase mRNA

  • Kim, Jeong-Ho;Chung, Ki-Chul;Kang, Hyun-Sam;Lee, Young-Kyu
    • Journal of Microbiology and Biotechnology
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    • 제1권4호
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    • pp.232-239
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    • 1991
  • Caboxymethyl cellulase (CMCase) I was purified from the induced culture filtrate of Penicllium verruculosum F-3 by ammonium sulfate precipitation, DEAE-Sephadex A-50 chromatography and Bio-gel P-150 filtration. The purified enzyme was assumed to be a glycoprotein consisting of 8.5% carbohydrate and having a molecular weight of 70.000 in SDS-polycrylamide gel electrophoresis (SDS-PAGE). The purified enzyme-specific anti-CMCase I IgG was obtained by rabbit immunization and protein A-sepharose CL-4B chromatography. The fungal poly($A^+$) RNA was isolated from the total RNA of the mycelium grown under cellulase induction conditions by oligo(dT)-cellulosse chromatography. The translation products in vitro were prepared by translating the isolated poly ($A^+$) RNA in rabbit reticulocyte lysate and analyzed by SDS-PAGE and fluorography. Of the translation products, CMCase I was identified by the immunoprecipitation against anti-CMCase I IgG.

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배양세포주(MDBK cell)내에 caffeine, 철분 및 vitamin E 혼합처리시 배양시간 경과에 따른 지질과 단백질 구성성분의 변화 (Changes of the lipid and protein components according to the time lapsed after combined treatment of caffeine, iron and vitamin E in MDBK cells)

  • 도재철;허린수
    • 대한수의학회지
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    • 제36권4호
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    • pp.809-819
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    • 1996
  • This study was conducted to identify the effects of caffeine or combinations of caffeine and iron or vitamin E on the lipid and protein components in the MDBK(Mardin-Darby Bovine Kidney) cells. For the In vitro test, MDBK cells in ${\alpha}$-MEM(Minimum Essential Medium) were divided into 4 treatment groups according to drug types and dosages as follows; the control(group A), group B was treated with 0.3mM caffeine, group C was treated with 0.3mM caffeine and 0.3mM ferric chloride, group D was treated with 0.3mM caffeine and 0.3mM vitamin E. Those groups were further divided into 5 subgroups according to the time lapsed(control, 4hrs, 8hrs, 24hrs and 48hrs lapsed group). The concentrations of the carbonyl group and malondialdehyde(MDA) and the patterns of the SDS-PAGE(Sodium Dodecyl Sulfate-Polyacrylamide Gel Electrophoresis) and fatty acid compositions were analyzed to determine the oxidative damages and metabolic changes on the lipid and protein components in the MDBK cells. The results obtained from this study were summarized as follows; 1. The concentrations of carbonyl group and malondialdehyde in MDBK cells of group C were significantly higher(p<0.01) in comparison to the control, and increased according to the time lapsed. But the results of groups B and D were little different in comparison to the group C. 2. As the analytical results of fatty acid compositions in MDBK cells, the proportions of palmitoleic acid and linoleic acid in groups B, C and D were lower in comparison to the control, while the proportion of arachidonic acid in groups B, C and D were significantly higher(p<0.01) in comparison to the control. 3. In order to determine the oxidative damages to the protein in MDBK cells, the patterns of the SDS-PAGE were examined and the patterns of SDS-PAGE in groups C and D were significantly different between 43kd and 200kd of molecular weight.

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젤 전기영동 및 액체 크로마토그래피 분리 방법을 이용하여 지방 세포로부터 분비되는 단백질들에 대한 프로테오믹스 연구 방법 (Intensive Proteomic Approach to Identify Secreted Peptides/Proteins from 3T3-L1 Adipocytes using Gel Electrophoresis and Liquid Chromatograph Separation Methods)

  • 황현호;백문창
    • 약학회지
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    • 제55권3호
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    • pp.203-212
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    • 2011
  • Adipocytes have been known to secrete a number of important proteins called adipokines with roles in energy metabolism, reproduction, cardiovascular function and immunity. In this study we have attempted to identify intensively secretory proteins from 3T3-L1 adipocytes. 3T3-L1 preadipocytes were differentiated into mature adipocytes and then the cells were left in serum-free medium. The supernatant was filtrated and dialyzed. Lyophilized secretome was fractionated by two different methods, 1-D SDS PAGE and RP-FPLC. The tryptic peptides from the gel slices and the FPLC fractions were analyzed by nanoLC/ESI-MS/MS. We identified a total of 303 identical proteins from two methods, 251 proteins from 1-D gel and 184 proteins from RP-FPLC. 86 of them were listed as a secretory protein Finally, we identified many known or unknown secreted proteins existed in the low level including adiponectin, angiotensinogen, bone morphogenetic protein-1 (BMP-1), macrophage migration inhibitory factor (MIF), insulin like growth factor-II (IGF-II), interleukin-6 (IL-6), follistatin-related protein-1, minecan, and resistin. The existence of some of secreted proteins has been confirmed in RNA level. This proteomic experiment is useful for the intensive screening of secretory proteins in many kinds of other cells.

범가자미, Verasper variegatus 수컷에서 $estradiol-17\beta$에 의해 유도된 vitellogenin의 면역학적 특성 (Immunological Characteristics of the Vitellogenin Induced by $Estradiol-17\beta$ in Male Spotted Flounder, Verasper variegatus)

  • 김윤;김우진;백혜자;김경길;방인철;한창희
    • 한국수산과학회지
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    • 제30권3호
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    • pp.480-487
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    • 1997
  • 범가자미, Verasper variegatus의 vitellogenin (Vg)을 분리하기 위하여 수컷에 $etradiol-17\beta(E_2) $를 처리하여 Vg의 합성을 유도하여 SDS-PAGE와 western blot으로 확인 하였다. 분리된 Vg의 분자량은 175 kD 이었으며 암컷 특이단백질이었다. $E_2$ 처리한 수컷 혈청을 찬 증류수로 침전시킨후 Sepharose CL-6B column chromatography에 의해 Vg을 분리하였다. 분리한 Vg에 대한 항혈청을 만들어 특이성을 western blot으로 확인하였고, 또한 Vg를 대한 단클론항체를 만들기 위하여 분리한 Vg을 Balb/c에 면역시켜 비장세포와 NS1 myeloma 세포를 세포융합하여 hybridoma를 만들었다. 세포융합된 18개 clone중 효소면역측정법에 의해 Vg과 가장 반응성이 높은 clone을 4D6으로 명명하였고, 이에 대한 특이성을 $E_2$가 처리되지 않은 수컷 혈청, $E_2$가 처리된 수컷혈청과 분리한 Vg를 사용하여 western blot으로 확인하였다.

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Alachlor의 제초기구(除草機構)에 관한 연구(硏究) - II. Alachlor가 귀리의 Peroxidase합성(合成)에 미치는 영향(影響) (A Study of Mode of Action of Alachlor - II. Effect of Alachlor on Peroxidase Synthesis in Oat(Avena sativa L.))

  • 권성환;김재철
    • 한국잡초학회지
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    • 제10권3호
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    • pp.233-239
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    • 1990
  • Alachlor를 귀리(Avena sativa L.)의 뿌리에 처리시(處理時) peroxidase의 변화(變化)에 대해서 조사(調査)한 결과(結果)는 다음과 같다. 1. Alachlor 처리구(處理區)는 무처리구(無處理區)에 비해서 $10^{-6}M$에서 0.20 unit, $10^{-3}M$은 0.27 unit로, 농도(濃度)가 높을수록 peroxidase의 합성량(合成量)이 증가(增加)되었다. 2. Peroxide를 직접 귀리의 뿌리에 12시간(時間) 처리시(處理時), 65mM에서 16%, 130mM에서 59%의 뿌리 생장(生長) 억제(抑制)되었다. 3. 귀리의 근단(根端) 분열(分裂) 조직(組織)은 4개의 동위(同位) peroxidase로 분리(分離)되는데, alachlor 처리시에는 특히 $P_1$, $P_6$$P_7$의 isoperoxidaserk 생성(生成)되었으며, SDS-PAGE에서 귀리의 근단(根端) 조직(組織)은 100kD 이하의 단백질(蛋白質)로 구성(構成)되어 있다.

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