• Journal of Internet Computing and Services
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• v.12 no.5
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• pp.73-85
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• 2011

Lots of valuable textual information is used to extract relations between named entities from literature. Composite kernel approach is proposed in this paper. The composite kernel approach calculates similarities based on the following information:(1) Phrase structure in convolution parse tree kernel that has shown encouraging results. (2) Predicate-argument structure patterns. In other words, the approach deals with syntactic structure as well as semantic structure using a reciprocal method. The proposed approach was evaluated using various types of test collections and it showed the better performance compared with those of previous approach using only information from syntactic structures. In addition, it showed the better performance than those of the state of the art approach.

• Journal of KIISE:Software and Applications
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• v.37 no.2
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• pp.85-94
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• 2010

This paper introduces a novel way to leverage convolution parse tree kernel to extract the interaction information between two proteins in a sentence without multiple features, clues and complicated kernels. Our approach needs only the parse tree alone of a candidate sentence including pairs of protein names which is potential to have interaction information. The main contribution of this paper is two folds. First, we show that for the PPI, it is imperative to execute parse tree pruning removing unnecessary context information in deciding whether the current sentence imposes interaction information between proteins by comparing with the latest existing approaches' performance. Secondly, this paper presents that tree kernel decay factor can play an pivotal role in improving the extraction performance with the identical learning conditions. Consequently, we could witness that it is not always the case that multiple kernels with multiple parsers perform better than each kernels alone for PPI extraction, which has been argued in the previous research by presenting our out-performed experimental results compared to the two existing methods by 19.8% and 14% respectively.

• Journal of KIISE:Computing Practices and Letters
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• v.15 no.12
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• pp.988-992
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• 2009

In this paper, we attempted to extract binary relations between terminologies using composite kernels consisting of convolution parse tree kernels and WordNet verb synset vector kernels which explain the semantic relationships between two entities in a sentence. In order to evaluate the performance of our system, we used three domain specific test collections. The experimental results demonstrate the superiority of our system in all the targeted collection. Especially, the increase in the effectiveness on KREC 2008, 8% in F1, shows that the core contexts around the entities play an important role in boosting the entire performance of relation extraction.

• Journal of KIISE:Software and Applications
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• v.36 no.8
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• pp.642-652
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• 2009

In order to improve the performance of the existing relation extraction approaches, we propose a method for combining two pivotal concepts which play an important role in classifying semantic relationships between entities in text. Having built a composite kernel-based relation extraction system, which incorporates both entity features and syntactic structured information of relation instances, we define nine classes of lexical features and synthetically apply them to the system. Evaluation on the ACE RDC corpus shows that our approach boosts the effectiveness of the existing composite kernels in relation extraction. It also confirms that by integrating the three important features (entity features, syntactic structures and contextual lexical features), we can improve the performance of a relation extraction process.