• Journal of KIISE
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• v.42 no.12
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• pp.1584-1589
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• 2015

With the advancement of next-generation sequencing (NGS) technologies, various genome browsers have been introduced. Because existing browsers focus on comparison of the genomic data of extant species, however, there is a need for a genome browser for ancestral genomes and their evolution. In this paper, we introduce a genome browser, AGB (Ancestral Genome Browser), that displays ancestral genome data reconstructed from existing species. With AGB, it is possible to trace genomic variations that occurred during evolution in a simple and intuitive way. We explain the capability of AGB in terms of visualizing ancestral genomic information and evolutionary genomic variations. AGB is now available at http://bioinfo.konkuk.ac.kr/genomebrowser/.

• The Journal of Korean Institute of Electromagnetic Engineering and Science
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• v.13 no.1
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• pp.12-18
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• 2002

In this paper a novel dielectric resonator (DR) bandpass filter (BPF) with flexible arrangement of attenuation poles is proposed. This DR filter is similar to a conventional DR filter except adding a microstrip line below a DR, which not only shifts the location of attenuation poles, but also improves skirt characteristics. The duplexer with the proposed DR BPF has been yielded better isolation and sharper skirt behavior than that with a conventional DR filter. The implemented duplexer has shown a good performance and been well agreed with the simulation.

• Proceedings of the Korea Electromagnetic Engineering Society Conference
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• 2001.11a
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• pp.202-206
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• 2001

In this paper a novel dielectric resonator (DR) bandpass filter (BPF) with flexible arrangement of attenuation poles is proposed. This DR filter is similar to a conventional DR filter except adding a microstrip line below a DR, which not only shifts the location of attenuation poles, but also improves skirt characteristics. The duplexer with the proposed DR BPF has been yielded better isolation and sharper skirt behavior than that with a conventional DR alter. The implemented duplexer has shown a good performance and been well agreed with the simulation.

• Proceedings of the Korean Ceranic Society Conference
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• 2003.10a
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• pp.99.1-99
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• 2003

• Proceedings of the Materials Research Society of Korea Conference
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• 1993.05a
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• pp.122-122
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• 1993

Perovskite형 PMN 은 약 -12$^{\circ}C$에서 Curie 최대치를 (Tm)를 가지며 1KHz에서 매우 5598;은 유전상수(~18000)를 갖기 때문에 유전체로의 응용이 큰데, PMN의제조시 쉽게 생성되는 Pyrochlore상은 일반적으로 매우 낮은 유전률(⊆210)을 가져 계의 전체 유전률을 크게 저하시키는 것으로 알려져 있으며 이런 이유로 이제까지의 연구의 초점의 주로 제조공정중 Pyrochlore 상의 첨가량 및 입자크기에 따른 PMN-Pyrechlore 2상혼합체에서 Prochlore 상의부피분률을 변화시킬 때 유전물의 변화률 GEM(General Effective Media)식을 이용하여 논의하고자한다. Pyrochlore상의 입자크기가 클 경우 2상혼합체 PMN 의 유전률은 Pyrocholre 상의 양이 증가함에 따라 서서히 감소하였으나 입자크기가 작은 겨우 급겨한 갑소를 보였다. 결국 2상의 입자크기 차이는 2상혼합체인 PMN의유전류과 밀접하 ㄴ관계가 있으며. 또한 유전률이 급격히 떨어지는 임계부피분률이 달라짐을 확인할 수 있었다. 또한 Pyrochlore상의첨가량이 증가함에 따라 2상혼합체인 PMN의 유전률의 변화는 GEM식 적용에 있어서는 임계부피률과 t값을 정확히 정하는 것이 중요한데 임계부피분률의 설정은 Perovskite PMN 과 Pyrochlore상의 입자 크기비를 이용하여 Kusy 이론을 기초로 결정하였으며, t 값은 퍼콜레이션 Power-law식에 적용시켜 정하였다였다

• Journal of the Korean Ceramic Society
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• v.30 no.5
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• pp.365-372
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• 1993

Variation of dielectric constant in PMN-Pyrochlore diphasic mixtures were investigated with grain size of pyrochlore phase. Size of pyrochlore phase was controlled by the numbers of calcining and sedimentation method during powder processing. When grain size of pyrochlore phase is large in the sintered specimen, dielectric constant slowly decreased with increase of amount of pyrochlore phase. On the contary, grain size of pyrochlore phase is small, dielectric constant drastically decreased. It was thought that small sized pyrochlore grains more easily surrounded high dielectric phase (perovskite PMN) than large ones with addition of pyrochlore phase.

• The Korean Journal of Zoology
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• v.34 no.4
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• pp.571-584
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• 1991

잉어과(Gyprinidae)의 Zocco속 어류 4종과 Candidia속 어류 1종에 대한 종간 유연관계와 종분화 연대측정 및 이들의 지질학적 분포경로를 밝히기 위하여 한국, 일본 및 대만에서 채집된 개체를 대상으로 전기영동법에 의한 유전자 분석을 하였다. 각 종의 지역별(한국, 일본, 대만) 집단간 유전적 유연관계를 분석한 결과 평균 유전적 근연치는 90% 이상이었다. Z. temmincki의 경우 일본집 단들은 한국의 A-type 집단과는 유연관계가 가까왔으나 한국의 B-type과는 유전적 차이가 현저하러다. Z. PlaD여5의 경우 한국집단과 일본집단사이의 유연관계는 S = 0.852였고, 한국집단과 대만집단 사이는 5 = 0.672, 일본집단과 대만집단 사이는 S = 0.751로서 지리적으로 현저한 차이를 업였다. Z. pochycephalus 3개 집단간의 유전적 근인치는 S = 0.963이었고 Candidia borbota 2개 집단간은 S = 0.946이었다. 종간의 유전적 근연환계를 비교한 결과 Candidia borbota와 Z. temmincki사이는 S = 0.608, Z. pluDpus와 1. pachycephalus사이는 S = 0.612였으나, Z. temmincki와 Z. platypus사이는 S = 0.441, Z. temmincki 와 Z. pochycepholus 사이는 S = 0.350이었고, Z. plotpus와 Condfda barbata사이는 S = 0.328로서 이들 사이에는 현저한 유전적 차이가 있었다. 각 종간의 롱분화 연대를 추산한 결과 이들은 약 480만년 전인 Pliocene 초기에 공통 조상종에서 분화하여 Z. temmincki, Candidia borbato group과 Z. plotypus, Z. pochycepholus group으로 분리되었고 약 260만년 전인 Pliocene 후기에 Z. temminc소와 Candidia borbota로 분화되었다고 추산되며 약 80만년 전인 Pleistocene시기에 남 temmincki B-type에서 h-type이 분화되었다짙 여겨진다. 한편 또 다른 한 단opP은 약 230만년 전인 열iocene후기에 대만 지역의 Z. plotypas에서 Z. pochvcepholus가 분화된 후 현재에 이르렀다고 추정된다. Z. platypus는 약150만년 이전인 초기 Pleistocene시기에 대만지역에서 한국 및 일본집단으로 분리되었다고 보며 이들 한국집단과 일본집단은 약 50만년 전 Pleistocene의 Middle기에 고황하 수계를 거쳐 현재의 분포 상황에 이르렀다고 여겨진다. 한편 대. temmin체과의 B-type에서 저온 적응으로 분화되었다고 추측되는 A-type은 약 20만년 전인 Pleistocene의 Riss기에 역시 고황하 수계를 통하여 한국과 일본으로 분포하여 현재에 이르렀다고 사료된다.

• Journal of the Korean Ceramic Society
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• v.30 no.1
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• pp.78-84
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• 1993

In PMN-pyrochlore phase mixtures, dielectric constant was measured as a function of the volume fraction of pyrochlore phase and considered with general effective media(GEM) equation. For the application of GEM equation to this system, the critical volume fraction(Vc) where connectivity between the perovskite PMN and pyrochlore phase changed from 0-3 to 3-3, was determined based on the each particle size ratio of two phases with microstructural observation. And then the t value was determined from modified percolation powder-law dependence ( K-Kc (V-Vc)t). In the case of applying such values of t and Vc to the GEM equation, which provided a reasonable fit to the measured dielectric constant within the experimental error range.

• Parasites, Hosts and Diseases
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• v.35 no.4
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• pp.277-282
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• 1997

The only observed morphological difference between Spirometra erinqsei and S. mcnsonoides is the uterine shape of the mature proglottid. Two species of worms are thought to be evolutionarily closely related. Biomolecular colnparison of the ho worms by polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) analysis was conducted to observe the genetic distance. The 285 rDNA, mitochondrial cytochrome c oxidase subunit I (mCOI), and ribosomal internal transcribed spacer 1 (ITSI) fragments were obtained from the worms by PCR. The PCR products were cleaved by 5 four-base pair restriction enzyme combinations (Msp I, Hae III, Alu I, Cfo I, Rsa I) , electrophoresed and analyzed with PAUP 3.1.1. The fragment Patterns or 285 rDNA and Lni demonstrated that two worms were in identical systematic tree with bootstrap number 94 and 100, respectively As for mCOI, bootstrap number was 74 in a different tree. Above results are indicative of recent common ancestry between S. etinocei and S. mansonoides.

• Childhood Kidney Diseases
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• v.15 no.1
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• pp.38-48
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• 2011

Purpose: Focal segmental glomerulosclerosis (FSGS) is the most common glomerulopathy causing pediatric renal failure. Since specific treatment targeting the etiology and pathophysiology of primary FSGS is yet elusive, the authors explored the pathophysiology of FSGS by transcriptome analysis of the disease using an animal model. Methods: FGS/kist strain, a mouse model of primary FSGS, and RFM/kist strain, as control and the parent strain of FGS/kist, were used. Kidney tissues were harvested and isolated renal cortex was used to extract mRNA, which was run on AB 1700 mouse microarray chip after reverse transcription to get the transcriptome profile. Results: Sixty two genes were differentially expressed in FGS/kist kidney tissue compared to the control. Those genes were related to cell cycle/cell death, immune reaction, and lipid metabolism/vasculopathy, and the key molecules of their networks were TNF, IL-6/4, IFN${\gamma}$, TP53, and PPAR${\gamma}$. Conclusion: This study confirmed that renal cell death, immune system activation with subsequent fibrosis, and lipid metabolism-related early vasculopathy were involved in the pathophysiology of FSGS. In addition, the relevance of methodology used in this study, namely transcriptome profiling, and Korean animal model of FGS/kist was validated. Further study would reveal novel pathophysiology of FSGS for new therapeutic targets.