• Title/Summary/Keyword: 개체모형

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Bio-Equivalence Analysis using Linear Mixed Model (선형혼합모형을 활용한 생물학적 동등성 분석)

  • An, Hyungmi;Lee, Youngjo;Yu, Kyung-Sang
    • The Korean Journal of Applied Statistics
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    • v.28 no.2
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    • pp.289-294
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    • 2015
  • Linear mixed models are commonly used in the clinical pharmaceutical studies to analyze repeated measures such as the crossover study data of bioequivalence studies. In these models, random effects describe the correlation between repeated outcomes and variance-covariance matrix explain within-subject variabilities. Bioequivalence analysis verifies whether a 90% confidence interval for geometric mean ratio of Cmax and AUC between reference drug and test drug is included in the bioequivalence margin [0.8, 1.25] performed using linear mixed models with period, sequence and treatment effects as fixed and sequence nested subject effects as random. A Levofloxacin study is referred to for an example of real data analysis.

A Study on IFLA FRBR(Functional Requirements for Bibliographic Records) Model (IFLA FRBR 모형에 관한 연구)

  • 김태수;이성숙
    • Proceedings of the Korean Society for Information Management Conference
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    • 2002.08a
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    • pp.103-108
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    • 2002
  • IFLA는 개체-관계모형을 기반으로 하여 서지레코드가 수행해야 할 기능에 관한 '서지레코드의 기능상 요건에 관한 모형'(Functional Requirements for Bibliographic Records: FRBR Model)을 발표하였다. 본 연구에서는 FRBR 모형의 비평적 분석을 통하여 새로운 목록규칙에 대한 방안을 모색하고자 한다.

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Bayesian Analysis for Categorical Data with Missing Traits Under a Multivariate Threshold Animal Model (다형질 Threshold 개체모형에서 Missing 기록을 포함한 이산형 자료에 대한 Bayesian 분석)

  • Lee, Deuk-Hwan
    • Journal of Animal Science and Technology
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    • v.44 no.2
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    • pp.151-164
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    • 2002
  • Genetic variance and covariance components of the linear traits and the ordered categorical traits, that are usually observed as dichotomous or polychotomous outcomes, were simultaneously estimated in a multivariate threshold animal model with concepts of arbitrary underlying liability scales with Bayesian inference via Gibbs sampling algorithms. A multivariate threshold animal model in this study can be allowed in any combination of missing traits with assuming correlation among the traits considered. Gibbs sampling algorithms as a hierarchical Bayesian inference were used to get reliable point estimates to which marginal posterior means of parameters were assumed. Main point of this study is that the underlying values for the observations on the categorical traits sampled at previous round of iteration and the observations on the continuous traits can be considered to sample the underlying values for categorical data and continuous data with missing at current cycle (see appendix). This study also showed that the underlying variables for missing categorical data should be generated with taking into account for the correlated traits to satisfy the fully conditional posterior distributions of parameters although some of papers (Wang et al., 1997; VanTassell et al., 1998) presented that only the residual effects of missing traits were generated in same situation. In present study, Gibbs samplers for making the fully Bayesian inferences for unknown parameters of interests are played rolls with methodologies to enable the any combinations of the linear and categorical traits with missing observations. Moreover, two kinds of constraints to guarantee identifiability for the arbitrary underlying variables are shown with keeping the fully conditional posterior distributions of those parameters. Numerical example for a threshold animal model included the maternal and permanent environmental effects on a multiple ordered categorical trait as calving ease, a binary trait as non-return rate, and the other normally distributed trait, birth weight, is provided with simulation study.

Parameterization of the Temperature-Dependent Development of Panonychus citri (McGregor) (Acari: Tetranychidae) and a Matrix Model for Population Projection (귤응애 온도발육 매개변수 추정 및 개체군 추정 행렬모형)

  • Yang, Jin-Young;Choi, Kyung-San;Kim, Dong-Soon
    • Korean journal of applied entomology
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    • v.50 no.3
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    • pp.235-245
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    • 2011
  • Temperature-related parameters of Panonychus citri (McGregor) (Acarina: Tetranychidae) development were estimated and a stage-structured matrix model was developed. The lower threshold temperatures were estimated as $8.4^{\circ}C$ for eggs, $9.9^{\circ}C$ for larvae, $9.2^{\circ}C$ for protonymphs, and $10.9^{\circ}C$ for deutonymphs. Thermal constants were 113.6, 29.1, 29.8, and 33.4 degree days for eggs, larvae, protonymphs, and deutonymphs, respectively. Non-linear development models were established for each stage of P. citri. In addition, temperature-dependent total fecundity, age-specific oviposition rate, and age-specific survival rate models were developed for the construction of an oviposition model. P. citri age was categorized into five stages to construct a matrix model: eggs, larvae, protonymphs, deutonymphs and adults. For the elements in the projection matrix, transition probabilities from an age class to the next age class or the probabilities of remaining in an age class were obtained from development rate function of each stage (age classes). Also, the fecundity coefficients of adult population were expressed as the products of adult longevity completion rate (1/longevity) by temperature-dependent total fecundity. To evaluate the predictability of the matrix model, model outputs were compared with actual field data in a cool early season and hot mid to late season in 2004. The model outputs closely matched the actual field patterns within 30 d after the model was run in both the early and mid to late seasons. Therefore, the developed matrix model can be used to estimate the population density of P. citri for a period of 30 d in citrus orchards.

Consolidation of FRBR Family Models Focusing on FRBR Library Reference Model ('FRBR family' 모형의 통합에 관한 연구 - FRBR 도서관 참조모형을 중심으로 -)

  • Park, Zi-young
    • Journal of the Korean Society for Library and Information Science
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    • v.50 no.1
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    • pp.533-553
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    • 2016
  • FRBR family models, which is published from 1998 to 2010, will be restructured in 2016 and the new name of the model is "FRBR Library Reference Model (LRM)." FRBR LRM is a consolidated model based on the legacy FRBR family of conceptual models - FRBR, FRAD, FRSAD and the two ontological models - FRBRCore and FaBio, as well as FRBRoo, the cooperated model with museum field. In this study, therefore, FRBR LRM is analyzed in respect to background information, characteristics of the model, such as user tasks, entities, attributes, and relationships. Experimental adaptation to $prot{\acute{e}}g{\acute{e}}$ for the LRM's entities and relationships is also conducted. Through this test, the differences between the original models and the consolidated model was reviewed and the applicability of the FRBR LRM model to the semantic web is also discussed. From now on, we have to select and modify among the various FRBR related models to meet our information needs. It will be difficult to find only one Implementation Methodology for every information needs.

Comprehension and application of Tobit and Heckit models for censored data (절단자료에 대한 Tobit과 Heckit 모형의 이해와 활용)

  • Kim, Jeonghwan;Jang, Mina;Cho, Hyungjun
    • The Korean Journal of Applied Statistics
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    • v.35 no.3
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    • pp.357-370
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    • 2022
  • In this paper, Tobit and Heckit models are introduced. These models have been used for analyzing censored data. Censoring occurs at a specific point and a large number of observations are distributed with a positive probability at a certain point. Censoring can occur due to observing limitation or exogenous variables. Tobit and Heckit models are used to correct sample selection bias, which can occur when an ordinary linear regression model is fitted to censored data. However, the difference between the two models is not clearly accounted for; hence, they have often been used interchangeably. Therefore, the suitability of the models was validated through simulated data, and demonstrated through real data. As the result, it was confirmed that both Tobit and Heckit models are well-fitted to the data censored due to observing limitation, although Tobit model was fitted parsimoniously. In contrast, only Heckit model is well-fitted to the data censored due to exogenous variables.

Estimation of Genetic Parameter for Carcass Traits According to MTDFREML and Gibbs Sampling in Hanwoo(Korean Cattle) (MTDFREML 방법과 Gibbs Sampling 방법에 의한 한우의 육질형질 유전모수 추정)

  • 김내수;이중재;주종철
    • Journal of Animal Science and Technology
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    • v.48 no.3
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    • pp.337-344
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    • 2006
  • The objective of this study was to compare of genetic parameter estimates on carcass traits of Hanwoo(Korean Cattle) according to modeling with Gibbs sampler and MTDFREML. The data set consisted of 1,941 cattle records with 23,058 animals in pedigree files at Hanwoo Improvement Center. The variance and covariance among carcass traits were estimated via Gibbs sampler and MTDFREML algorithms. The carcass traits considered in this study were longissimus dorsi area, backfat thickness, and marbling score. Genetic parameter estimates using Gibbs sampler and MTDFREML from single-trait analysis were similar with those from multiple-trait analysis. The estimated heritabilities using Gibbs sampler were .52~.54, .54 ~.59, and .42~.44 for carcass traits. The estimated heritabilities using MTDFREML were .41, .52~.53, and .31~.32 for carcass traits. The estimated genetic correlation using Gibbs sampler and MTDFREML of LDA between BF and MS were negatively correlated as .34~.36, .23~.37. Otherwise, genetic correlation between BF and MS was positive genetic correlation as .36~.44. The correlations of breeding value for marbling score between via MTDFREML and via Gibbs sampler were 0.989, 0.996 and 0.985 for LDA, BF and MS respectively.

A case study on the random coefficient model for diet experimental data (변량계수모형의 식이요법 실험자료에 관한 사례연구)

  • Jo, Jin-Nam;Baik, Jai-Wook
    • Journal of the Korean Data and Information Science Society
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    • v.20 no.5
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    • pp.787-796
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    • 2009
  • A random coefficient model is applied when times of the repeated measurements are not fixed in experiments with respect to the subjects. The procedures of the inference of a random coefficient model are same as those of a mixed model. Diet experimental data was used for applying the random coefficient model. Various random coefficient models are investigated for the experimental data, and are compared each other. Finally, optimal random coefficient model would be selected. It resulted from the analysis that for the fixed effect factor, the baseline, treatment, height, and time effect were very significant. The treatment effect of the diet foods and exercises were more effective in losing weight than the effect of the diet foods only. The fixed cubic time effect was very significant. The variance components corresponding to the subject effect, linear time effect, quadratic time effect, and cubic time effect of the random coefficients are all positive. When quartic time effect was added as random coefficients the model did not converge. Thus random coefficients up to the cubic terms was considered as the optimal model.

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Repeated Records Animal Model to Estimate Genetic Parameters of Ultrasound Measurement Traits in Hanwoo Cows (반복모형을 이용한 한우 초음파 측정형질의 유전모수추정)

  • Park, Cheol-Hyeon;Koo, Yang-Mo;Kim, Byung-Woo;Sun, Du-Won;Kim, Jung-Il;Song, Chi-Eun;Lee, Ki-Hwan;Lee, Jae-Youn;Jeoung, Yeoung-Ho;Lee, Jung-Gyu
    • Journal of Animal Science and Technology
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    • v.54 no.2
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    • pp.71-75
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    • 2012
  • The present study data were obtained from 36,894 cows in Korea Animal Improvement Association from 2001 to 2009 which was subjected for ultrasound measurements (eye muscle area, back-fat thickness, marbling score) and descent. Repeated record models were carried out using 7,913 of 36,894 of total animal traits. The ultrasound measured traits and performance test data were used to study the chest girth, body condition score, eye muscle area, back-fat thickness and marbling score with genetic correlation and parameters for the ultrasound measured traits using REMLF90 program. Genetic correlation of eye muscle area with back-fat thickness, marbling score and back-fat thickness with marbling score were noticed in repeated records animal model as 0.69, 0.54, and 0.59, whereas in multiple trait animal model method were 0.07, 0.66, and 0.39, respectively. Repeated records of animal models were used as positive correlation of traits. Multiple trait animal models were used as negative correlation of eye muscle area with marbling score. The analysis on repeat records of animal models using ultrasound measurements about Korean cattle showed positive effects for each traits. In comparison differences between the repeat records of animal models and multiple trait animal models was found with higher traits of her, the heritability and repeatability was found higher in repeat records animal models. In light of these assessments, carcass traits by ultrasound measurements are expected to help and improve an accurate analysis of each trait and if the research analysis using repeat records of animal models continue when we estimate genetic ability of these traits.