• 제목/요약/키워드: (L, N)-structure

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진해만의 장목항에서 단주기 샘플링에 의한 중형동물플랑크톤 군집의 연변동 (Annual Variations in Community Structure of Mesozooplankton by Short-term Sampling in Jangmok Harbor of Jinhae Bay)

  • 황옥명;신경순;백승호;이우진;김수암;장민철
    • Ocean and Polar Research
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    • 제33권3호
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    • pp.235-253
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    • 2011
  • The annual variation of mesozooplankton community in the Jangmok harbor of Jinhae Bay was studied in relation to environmental variables. Sampling was carried out weekly from January to December 2009. During the study periods, mesozooplankton community consisted of 44 taxa and the annual mean abundance was 8308 inds. $m^{-3}$. The maximum abundance was observed to be 50043 inds. $m^{-3}$ in August and the minimum in April with 1013 inds. $m^{-3}$. Of these, Penilia avirostris, cirripedia larvae, Evadne tergestina, Acartia omorii, Oikopleura s, Paracalanus parvus s. l., Eurytemora pacifica, Podon s, Oithona s, and Acartia steueri were observed as dominant species in Jangmok bay and they also contributed to 79% of total mesozooplankton. According to non-metric multidimensional scaling (nMDS) and cluster analysis based on the mesozooplankton community data from each season, the community was divided into three groups. The first group included appearence species in winter and spring season, which is mainly dominated the copepod such as A. omorii and E. pacifica. The second and third group was composed with observed species in summer and autumn, respectively. Based on the SIMPER (similarity percentages), P. avirostris in summer and cirripedia larvae in autumn were significantly dominated. Our results indicate that although the mesozooplankton abundances in Jangmok harbor fluctuated abruptly, its annual variation was strongly influenced by water temperature.

Rational Introduction of Disulfide Bond to Enhance Optimal Temperature of Lipomyces starkeyi $\alpha$-Dextranase Expressed in Pichia pastoris

  • Chen, Lin;Yu, Chao;Zhou, Xiangshan;Zhang, Yuanxing
    • Journal of Microbiology and Biotechnology
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    • 제19권12호
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    • pp.1506-1513
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    • 2009
  • $\alpha$-Dextranase, which can hydrolyze dextran, is largely used in the sugar industry. However, a thermostable $\alpha$-dextranase is needed to alleviate the viscosity of syrups and clean blocked machines. Thus, to improve the optimal temperature of Lipomyces starkeyi $\alpha$-dextranase expressed by Pichia pastoris, the rational introduction of a de novo designed disulfide bond was investigated. Based on the known structure of Penicillium minioluteum dextranase, L. starkeyi $\alpha$-dextranase was constructed using homology modeling. Four amino acids residues were then selected for site-directed mutagenesis to cysteine. When compared with the wild-type dextranase, the mutant DexM2 (D279C/S289C) showed a more than $13^{\circ}C$ improvement on its optimal temperature. DexM2 and DexM12 (T245C/N248C, D279C/S289C) also showed a better thermal stability than the wild-type dextranase. After the introduction of two disulfide bonds, the specific activity of DexM12 was evaluated and found to be two times higher than that of the wild-type. Moreover, DexM12 also showed the highest $V_{max}$.

ACE-Inhibitory Properties of Proteolytic Hydrolysates from Giant Jellyfish Nemopilema nomurai

  • Yoon, Ho-Dong;Kim, Yeon-Kye;Lim, Chi-Won;Yeun, So-Mi;Lee, Moon-Hee;Moon, Ho-Sung;Yoon, Na-Young;Park, Hee-Yeon;Lee, Doo-Seog
    • Fisheries and Aquatic Sciences
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    • 제14권3호
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    • pp.174-178
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    • 2011
  • This study aimed to determine the degree of hydrolysis and angiotensin-I-converting enzyme (ACE)-inhibitory activity of Giant Jellyfish Nemopilema nomurai (jellyfish) hydrolysates. The degree of hydrolysis using six proteolytic enzymes (Alcalase, Flavozyme, Neutrase, papain, Protamex, and trypsin) ranged from 13.1-36.8% and the inhibitory activities from 20.46-79.58%. Using papain hydrolysate, we newly isolated and characterized ACE-inhibitory peptides with a molecular weight of 3,000-5,000 Da that originated from jellyfish collagen. The purified peptide (FII-b) was predicted to be produced from an alpha-2 fragment of the type IV collagen of jellyfish. The N-terminal sequence of FII-b was Asp-Pro-Gly-Leu-Glu-Gly-Ala-His-Gly- and showed 87% identity to the collagen type IV alpha-2 fragment of Rattus norvegicus and a predicted protein from Nematostella vectensis, indicating that the ACE-inhibitory peptide originated from the collagen hydrolysate and had an $IC_{50}$ value of 3.8 ${\mu}g$/mL. The primary structure of the fragment is now being studied; this peptide represents an interesting new type of ACE inhibitor and will provide knowledge of the potential applications of jellyfish components as therapies for hypertension.

Anticancer activity and potential mechanisms of 1C, a ginseng saponin derivative, on prostate cancer cells

  • Wang, Xu De;Su, Guang Yue;Zhao, Chen;Qu, Fan Zhi;Wang, Peng;Zhao, Yu Qing
    • Journal of Ginseng Research
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    • 제42권2호
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    • pp.133-143
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    • 2018
  • Background: AD-2 (20(R)-dammarane-3b, 12b, 20, 25-tetrol; 25-OH-PPD) is a ginsenoside and isolated from Panax ginseng, showing anticancer activity against extensive human cancer cell lines. In this study, effects and mechanisms of 1C ((20R)-3b-O-(L-alanyl)-dammarane-12b, 20, 25-triol), a modified version of AD-2, were evaluated for its development as a novel anticancer drug. Methods: MTT assay was performed to evaluate cell cytotoxic activity. Cell cycle and levels of reactive oxygen species (ROS) were determined using flow cytometry analysis. Western blotting was employed to analyze signaling pathways. Results: 1C concentration-dependently reduces prostate cancer cell viability without affecting normal human gastric epithelial cell line-1 viability. In LNCaP prostate cancer cells, 1C triggered apoptosis via Bcl-2 family-mediated mitochondria pathway, downregulated expression of mouse double minute 2, upregulated expression of p53 and stimulated ROS production. ROS scavenger, N-acetylcysteine, can attenuate 1C-induced apoptosis. 1C also inhibited the proliferation of LNCaP cells through inhibition on $Wnt/{\beta}-catenin$ signaling pathway. Conclusion: 1C shows obvious anticancer activity based on inducing cell apoptosis by Bcl-2 family-mediated mitochondria pathway and ROS production, inhibiting $Wnt/{\beta}-catenin$ signaling pathway. These findings demonstrate that 1C may provide leads as a potential agent for cancer therapy.

나노두께 퍼말로이에서의 계면효과에 의한 자기적 물성 변화 (Evolution of Magnetic Property in Ultra Thin NiFe Films)

  • 정영순;송오성
    • 한국자기학회지
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    • 제14권5호
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    • pp.163-168
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    • 2004
  • 나노 두께의 NiFe의 자기적 특성을 살펴보기 위해 Si(100)/ $SiO_2$(200 nm)/Ta(5 nm)/N $i_{80}$F $e_{20}$(1~15 nm)의 구조를 ICP형 헬리콘 스퍼터로 제작하였다. 제작된 시편의 자기적 물성은 SQUID를 이용하여 $\pm$50 Oe에서의 4.2K와 300K에서 각각의 M-H loop를 측정하여 자기탄성에너지 변화와 보자력을 확인하였다. 또한 SQUID로 4.2K-300K에서의 M-T curve를 통해 온도에 따른 포화자화를 두께에 따라 살펴보았다. TEM을 사용하여 제작된 시편의 각 계면간의 미세구조를 살펴보았다 나노두께의 NiFe는 3 nm 이하에서는 $B_{bulk}$=0, $B_{surf}$=-3${\times}$$10^{-7}$(J/$m^2$)의 자기 탄성계수를 보였으며, 보자력은 급격히 증가하는 것을 확인하였다. 나노 두께의 퍼말로이는 계면효과에 의해서 벌크특성과 다른 자기탄성계수, 보자력, Ms의 변화가 발생하였다. 따라서 나노급 소자를 제작할 때 이러한 변화를 고려하여 설계하여야 하였다.

Statistical Analysis for Turbulence Properties of the Orion Molecular Cloud

  • Yun, Hyeong-Sik;Lee, Jeong-Eun;Choi, Yunhee;Lee, Seokho;Choi, Minho;Kang, Hyunwoo;Tatematsu, Ken'ichi;Offner, Stella S.R.;Gaches, Brandt A.L.;Heyer, Mark H.;Evans, Neal J. II;Yang, Yao-Lun
    • 천문학회보
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    • 제41권2호
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    • pp.55.5-56
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    • 2016
  • Turbulence plays an important role in molecular clouds. However, the properties of turbulence are poorly understood. In order to study the influence of turbulence in molecular clouds, we need to sample the turbulent properties in the full range of scales down to sonic scale. We mapped the $20^{\prime}{\times}60^{\prime}$ area covering the Orion Molecular Cloud (OMC) 1-4 region in HCN 1-0 and HCO+ 1-0 with Taeduk Radio Astronomy Observatory (TRAO) 14-m telescope as part of the TRAO key science program, "Mapping turbulent properties of star-forming molecular clouds down to the sonic scale (PI: Jeong-Eun Lee)". In addition, we combine our TRAO data with other molecular line maps ($^{13}CO$ 1-0, $C^{18}O$ 1-0, CS 1-0, $N_2H^+$ 1-0) obtained with the Nobeyama Radio Observatory (NRO) 45-m telescope. To analyze these data, we apply statistical methods, the principal component analysis (PCA) and spectral correlation function (SCF), which are known to be useful to study underlying turbulent properties and to quantitatively characterize cloud structure. We will present the preliminary results of observations and analyses.

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Directed Evolution of Beta-galactosidase from Escherichia coli into Beta-glucuronidase

  • Xiong, Ai-Sheng;Peng, Ri-He;Zhuang, Jing;Liu, Jin-Ge;Xu, Fang;Cai, Bin;Guo, Zhao-Kui;Qiao, Yu-Shan;Chen, Jian-Min;Zhang, Zhen;Yao, Quan-Hong
    • BMB Reports
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    • 제40권3호
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    • pp.419-425
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    • 2007
  • In vitro directed evolution through DNA shuffling is a powerful molecular tool for creation of new biological phenotypes. E. coli $\beta$-galactosidase and $\beta$-glucuronidase are widely used, and their biological function, catalytic mechanism, and molecular structures are well characterized. We applied an in vitro directed evolution strategy through DNA shuffling and obtained five mutants named YG6764, YG6768, YG6769, YG6770 and YG6771 after two rounds of DNA shuffling and screening, which exhibited more $\beta$-glucuronidase activity than wild-type $\beta$-galactosidase. These variants had mutations at fourteen nucleic acid sites, resulting in changes in ten amino acids: S193N, T266A, Q267R, V411A, D448G, G466A, L527I, M543I, Q626R and Q951R. We expressed and purified those mutant proteins. Compared to the wild-type protein, five mutant proteins exhibited high $\beta$-glucuronidase activity. The comparison of molecular models of the mutated and wildtype enzymes revealed the relationship between protein function and structural modification.

인공습지 내 개방수역 조성에 따른 처리효율분석 (Analysis of Treatment Efficiency according to Open-water in Constructed Wetland)

  • 김형철;윤춘경;엄한용;김형중;함종화
    • 한국물환경학회지
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    • 제24권6호
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    • pp.709-717
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    • 2008
  • The field scale experiment which is constructed with four sets (0.88 ha for each set) of wetland (0.8 ha) and pond (0.08 ha) systems was performed to examine the effect of plant coverage on the constructed wetland performance and to recommend the optimum development and management of macrophyte communities. After six growing seasons of wetlands, plant coverage was about 100%. And the concentration of DO showed low value (1.0~5.4 mg/L). This is caused by a blighted plant consumed dissolved oxygen with decay in water column. As the result, water column went to be anaerobic conditions and T-N removal rate are 58~67%. Dead vegetation increased nitrogen removal during winter because it is a source of organic carbon which is an essential parameter in denitrification. However, wetland released phosphorus caused by a blighted plant and accumulation, the removal rate of phosphorus might be decreased. To rise of DO concentration, the three open-waters were constructed in cell 3 and 4. Cell 3 has two open-waters (width 10 m, depth 1.8 m) and cell 4 has one open-water (width 20 m, depth 1.8 m). As the result, DO concentration and treatment efficiency of nutrient and BOD were improved. In case that constructed wetland is operated for a long time, physical circulation structure such as open water help continuous circulation of aerobic and anaerobic conditions. Through the constructed open-water, treatment efficiency of phosphorus and nitrogen in wetland could be improved effectively.

W-CDMA 시스템에서 고해상 채널 추정을 이용한 IPDL 기법의 무선 측위 성능분석 (Performance Analysis of IPDL Methods Using High Resolution Channel Estimation Technique for W-CDMA systems)

  • 朴雲龍;崔州平;李元澈
    • 대한전자공학회논문지TC
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    • 제39권6호
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    • pp.10-10
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    • 2002
  • 본 논문은 기지국들로부터 단말기로의 TDOA(Time Difference of Arrival) 성분을 기반으로 한 무선측위 기법의 성능향상에 영향을 미치는 다중경로의 최초 도착 시간 지연 성분을 정밀하게 취득하기 위한 고해상 채널 추정 기법을 소개한다. 제안된 고해상 채널 추정 기법은 3GPP에서 공용 파일럿 신호의 수신 자기 상관 함수 특성을 주파수 영역상에서 샘플링하고 Hermitian Toeplitz 성질을 만족하는 행렬을 구성하여 이에 대한 벡터 영역상의 분석을 거쳐 시간 지연 성분들을 정밀 추정하게 된다. 본 논문에서 시뮬레이션을 통하여 제안된 고해상 채널 추정 기법을 수정 CODIT 모델을 바탕으로 3GPP에서 고려되는 PR-IPDL(Pseudo Random-Idle Period Downlink)과 TA-lPDL(Time Aligned-Idle Period Down-link) 무선 측위 기법에 적용하여 무선 측위 성능을 체계적으로 분석한다.

동적응답의 변화를 고려한 점용접부의 진동피로해석 (Vibration Fatigue Analysis for Multi-Point Spot-Welded SPCC Structure Considering Change of Dynamic Response)

  • 강기원;장일주;김정규
    • 대한기계학회논문집A
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    • 제34권9호
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    • pp.1193-1199
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    • 2010
  • 점용접은 자동차 산업에서 차체 구조물의 대표적 접합방법으로서 차량에 피로하중이 작용할 경우 구조물 전체의 파손 발생이전에 점용접부 일부에 조기 피로파손의 발생가능성이 존재한다. 이러한 점용접부의 국부적 파손은 차량 구조물의 동적 반응 및 이에 따른 피로거동의 변화를 야기할 가능성이 존재한다. 따라서 차량과 같이 스펙트럼하중을 받는 구조물의 피로수명 평가를 위해서는 이러한 점용접부의 국부적 파손에 의한 동적 반응의 변화를 고려하여야 한다. 본 논문에서는 점용접부의 누적피로손상으로 인한 동적반응의 변화를 고려한 진동피로해석을 수행하였다. 이에 필요한 S-N 선도는 전단 점용접 시험편에 대한 일정진폭 피로시험을 통하여 획득하였다. 또한 스펙트럼하중하의 점용접부의 피로수명은 유한요소해석에 기반한 진동피로해석을 통하여 평가하였다.