• Title/Summary/Keyword: ${\pi}$-mapping

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QTL Mapping for Major Agronomic Traits across Two Years in Soybean(Glycine max L. Merr.)

  • Li, Wenxin;Zheng, Da-Hao;Van, Kyu-Jung;Lee, Suk-Ha
    • Journal of Crop Science and Biotechnology
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    • v.11 no.3
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    • pp.171-176
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    • 2008
  • The agronomic traits, such as days to flowering and maturity, plant height, 100-seed weight and seed filling period, are quantitatively inherited and important characters in soybean(Glycine max L. Merr.). A total of 126 $F_5$ recombinant inbred lines(RILs) developed from the cross of PI 171451$\times$Hwaeomputkong were used to identify quantitative trait loci(QTLs) for days to flowering(FD), days to maturity(MD), plant height(PH), 100-seed weight(SW), number of branches(NB) and seed filling period(FP). A total of 136 simple sequence repeat(SSR) markers segregated in a RIL population were distributed over 20 linkage groups(LGs), covering 1073.9 cM of the soybean genome with the average distance between adjacent markers of 7.9 cM. Five independent QTLs were identified for FD, three for MD, two for PH, three for SW, one for NB and one for FP. Of these, three QTLs were related to more than two traits of FD, MD, PH, NB and FP and mapped near the same positions on LGs H and O. Thus, these traits could be correlated with biologically controlled major QTLs in this soybean RIL population.

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Characteristic Chemical Correlations in Nearby Star-forming Molecular Clouds

  • Yun, Hyeong-Sik;Lee, Jeong-Eun;Evans, Neal J. II;Offner, Stella;Heyer, Mark H.;Choi, Yunhee;Lee, Yong-Hee;Baek, Giseon;Choi, Minho;Kang, Hyunwoo;Tatematsu, Ken'ichi;Lee, Seokho;Yang, Yao-Lun;Gaches, Brandt;Chen, How-Huan
    • The Bulletin of The Korean Astronomical Society
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    • v.45 no.1
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    • pp.41.1-41.1
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    • 2020
  • Different molecular lines trace different physical environments (with various densities and temperatures) within molecular clouds (MCs). Therefore, multimolecular line observations are crucial to study the physical and chemical structures of MCs. We observed the Orion A and Ophiuchus clouds in six different molecular lines as a Taeduk Radio Astronomy Observatory Key Science Program (TRAO-KSP), "mapping Turbulent properties In star-forming MolEcular clouds down to the Sonic scale" (TIMES; PI: Jeong-Eun Lee). Here, we investigate the characteristic relations between the observed lines by performing the Principal Component Analysis (PCA). We also investigate the correlation between the line intensity distributions and the physical parameters, such as the gas column density and dust temperature. Finally, we will discuss how the correlations among different chemical tracers vary with the star formation environments.

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The Porcine FoxO1, FoxO3a and FoxO4 Genes: Cloning, Mapping, Expression and Association Analysis with Meat Production Traits

  • Yu, Jing;Zhou, Quan-Yong;Zhu, Meng-Jin;Li, Chang-Chun;Liu, Bang;Fan, Bin;Zhao, Shu-Hong
    • Asian-Australasian Journal of Animal Sciences
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    • v.20 no.5
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    • pp.627-632
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    • 2007
  • FoxO1, FoxO3a and FoxO4 belong to the FoxO gene family, which play important roles in the PI3K/PKB pathway. In this study, we cloned the porcine FoxO1, FoxO3a and FoxO4 sequences and assigned them to SSC11p11-15, SSC1p13 and SSC xq13 using somatic cell hybrid panel (SCHP) and radiation hybrid panel (IMpRH). RT-PCR results showed that these three genes are expressed in multiple tissues. Sequencing of PCR products from different breeds identified a synonymous T/C polymorphism in exon 2 of FoxO3a. This FoxO3a single nucleotide polymorphism (SNP) can be detected by AvaII restriction enzyme. The allele frequencies of this SNP were investigated in Dahuabai, Meishan, Tongcheng, Yushan, Large White, and Duroc pigs. Association of the genotypes with growth and carcass traits showed that different genotypes of FoxO3a were associated with carcass length and backfat thickness between 6th and 7th ribs (BTR) and drip loss (p<0.05).

Dummy Sequence Insertion for PAPR Reduction of OFDM Communication System (OFDM 통신시스템의 PAPR 저감을 위한 더미 시퀀스 삽입)

  • 이재은;유흥균;정영호;함영권
    • The Journal of Korean Institute of Electromagnetic Engineering and Science
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    • v.14 no.12
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    • pp.1239-1247
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    • 2003
  • OFDM(orthogonal frequency division multiplexing) communications system is very attractive for the high data rate transmission in the frequency selective lading channel. Since OFDM has high PAPR(peak-to-average power ratio), OFDM signal may be distorted by the nonlinear HPA(high power amplifier). In this paper, we propose the DSI(dummy sequence insertion) method for OFDM communication system. Some sub-carriers are inserted for PAPR reduction. They carry the specified dummy data sequence which are used for only PAPR reduction and do not work as side information like the conventional PTS(partial transmit sequence) or SLM(selected mapping) method. We use the complementary sequence and the combination of the correlation sequence as the dummy sequence. Flipping technique is used for the DSI method to get the effective PAPR reduction. It is important that BER of the proposed method is independent of the damage of the dummy data sequence. And DSI method has better spectral efficiency than the conventional block coding. On the other hand, threshold PAPR method is applied to cut down the processing time. However, this DSI method is not better than the conventional PTS method in the respect of the PAPR reduction performance. The DSI method includes the threshold PAPR lower than the PAPR of the OFDM signal, reduces the processing time and improves the BER performance.

Statistical Analysis for Turbulence Properties of the Orion Molecular Cloud

  • Yun, Hyeong-Sik;Lee, Jeong-Eun;Choi, Yunhee;Lee, Seokho;Choi, Minho;Kang, Hyunwoo;Tatematsu, Ken'ichi;Offner, Stella S.R.;Gaches, Brandt A.L.;Heyer, Mark H.;Evans, Neal J. II;Yang, Yao-Lun
    • The Bulletin of The Korean Astronomical Society
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    • v.41 no.2
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    • pp.55.5-56
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    • 2016
  • Turbulence plays an important role in molecular clouds. However, the properties of turbulence are poorly understood. In order to study the influence of turbulence in molecular clouds, we need to sample the turbulent properties in the full range of scales down to sonic scale. We mapped the $20^{\prime}{\times}60^{\prime}$ area covering the Orion Molecular Cloud (OMC) 1-4 region in HCN 1-0 and HCO+ 1-0 with Taeduk Radio Astronomy Observatory (TRAO) 14-m telescope as part of the TRAO key science program, "Mapping turbulent properties of star-forming molecular clouds down to the sonic scale (PI: Jeong-Eun Lee)". In addition, we combine our TRAO data with other molecular line maps ($^{13}CO$ 1-0, $C^{18}O$ 1-0, CS 1-0, $N_2H^+$ 1-0) obtained with the Nobeyama Radio Observatory (NRO) 45-m telescope. To analyze these data, we apply statistical methods, the principal component analysis (PCA) and spectral correlation function (SCF), which are known to be useful to study underlying turbulent properties and to quantitatively characterize cloud structure. We will present the preliminary results of observations and analyses.

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TRAO Key Science Program: mapping Turbulent properties In star-forming MolEcular clouds down to the Sonic scale (TIMES)

  • Yun, Hyeong-Sik;Lee, Jeong-Eun;Choi, Yunhee;Lee, Seokho;Baek, Giseon;Lee, Yong-Hee;Choi, Minho;Kang, Hyunwoo;Tatematsu, Ken'ichi;Gaches, Brandt A.L.;Heyer, Mark H.;Evans, Neal J. II;Offner, Stella S.R.;Yang, Yao-Lun
    • The Bulletin of The Korean Astronomical Society
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    • v.43 no.1
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    • pp.66.1-66.1
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    • 2018
  • Turbulence is a phenomenon which largely determines the density and velocity fields in molecular clouds. Turbulence can produce density fluctuation which triggers a gravitational collapse, and it can also produce a non-thermal pressure against gravity. Therefore, turbulence controls the mode and tempo of star formation. However, despite many years of study, the properties of turbulence remain poorly understood. As part of the Taeduk Radio Astronomy Observatory (TRAO) Key Science Program (KSP), "apping Turbulent properties In star-forming MolEcular clouds down to the Sonic scale (TIMES; PI: Jeong-Eun Lee)", we have mapped two star-forming clouds, the Orion A and the ${\rho}$ Ophiuchus molecular clouds, in 3 sets of lines (13CO 1-0/C18O 1-0, HCN 1-0/HCO+ 1-0, and CS 2-1/N2H+ 1-0) using the TRAO 14-m telescope. We aim to map entire clouds with a high-velocity resolution (~0.05 km/s) to compare turbulent properties between two different star-forming environments. We will present the preliminary results using a statistical method, Principal Component Analysis (PCA), that is a useful tool to represent turbulent power spectrum.

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Transformation of Brassica napus with Acid Phosphatase Gene (Acid Phosphatase 유전자 도입에 의한 유채의 형질 전환)

  • Lee, Hyo-Shin;Son, Dae-Young;Jo, Jin-Ki
    • Journal of The Korean Society of Grassland and Forage Science
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    • v.17 no.3
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    • pp.285-292
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    • 1997
  • This study was conducted to obtain the transgenic Brnssica napus plants with tobacco Apase gene using the binary vector system of Agrobacteriurn fumefociens. The results obtained were summarized as follows: A repressible acid phosphatase gene of Saccharon~yces cerevisiae, pho105 was used for screening of tobacco Apase cDNA. In order to identify Apase gene in tobacco genome, Southern blot analysis was pcrformed and the Apase gcnc may be present as a single copy, or at most two or three copies, in tobacco genome. To isolate the tobacco Apase gene, tobacco cDNA library was constructed using purifed mRNA from -Pi treated tobacco root and the plaque forming unit of the library was 2.8 x $10^5$ pfu/m${\ell}$, therefore the library might cover all expressed mRNAs. Using pho5 as a probe. tobacco Apase cDNA was cloned, and restriction mapping and Southern blot analysis of cDNA insert were revealed that the 3.6 kb cDNA contained tobacco acid phosphatase cDNA. Plasmid pGA695 -tcAPl was constructed by subcloning tobacco Apase cDNA into the Hind site of pGA695 with 35s promoter which can be expressed constitutively in plants. The Brassica napus cotyledonary petioles were cocultivated with the ,4 grobacteriunz and transferred to the selection medium. The transformed and regenerated plants were transplanted to soil medium. Southern blot analysis was done on the transformed plants, and it was confirmed that a foregin gene was stably integrated into the genonies of B. nnpus plants.

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TRAO-TIMES: Investigating Turbulence and Chemistry in Two Star-forming Molecular clouds

  • Yun, Hyeong-Sik;Lee, Jeong-Eun;Choi, Yunhee;Evans, Neal J. II;Offner, Stella S.R.;Baek, Giseon;Lee, Yong-Hee;Choi, Minho;Kang, Hyunwoo;Cho, Jungyeon;Lee, Seokho;Tatematsu, Ken'ichi;Heyer, Mark H.;Gaches, Brandt A.L.;Yang, Yao-Lun
    • The Bulletin of The Korean Astronomical Society
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    • v.46 no.2
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    • pp.37.2-37.2
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    • 2021
  • Turbulence produces the density and velocity fluctuations in molecular clouds, and dense regions within the density fluctuation are the birthplace of stars. Also, turbulence can produce non-thermal pressure against gravity. Thus, turbulence plays a crucial roles in controlling star formation. However, despite many years of study, the detailed relation between turbulence and star formation remain poorly understood. As part of the Taeduk Radio Astronomy Observatory (TRAO) Key Science Program (KSP), "mapping Turbulent properties In star-forming MolEcular clouds down to the Sonic scale (TIMES; PI: Jeong-Eun Lee)", we mapped two star-forming molecular clouds, the Orion A and the ρ Ophiuchus molecular clouds, in six molecular lines (13CO 1-0/C18O 1-0, HCN 1-0/HCO+ 1-0, and CS 2-1/N2H+ 1-0) using the TRAO 14-m telescope. We applied the Principal Component Analysis (PCA) to the observed data in two different ways. The first method is analyzing the variation of line intensities in velocity space to evaluate the velocity power spectrum of underlying turbulence. We investigated the relation between the star formation activities and properties of turbulence. The other method is analyzing the variation of the integrated intensities between the molecular lines to find the characteristic correlation between them. We found that the HCN, HCO+, and CS lines well correlate with each other in the integral shaped filament in the Orion A cloud, while the HCO+ line is anti-correlate with the HCN and CS lines in L1688 of the Ophiuchus cloud.

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TRAO KSP TIMES: Homogeneous, High-sensitivity, Multi-transition Spectral Maps toward the Orion A and Ophiuchus Cloud with a High-velocity Resolution.

  • Yun, Hyeong-Sik;Lee, Jeong-Eun;Choi, Yunhee;Evans, Neal J. II;Offner, Stella S.R.;Heyer, Mark H.;Lee, Yong-Hee;Baek, Giseon;Choi, Minho;Kang, Hyunwoo;Cho, Jungyeon;Lee, Seokho;Tatematsu, Ken'ichi;Gaches, Brandt A.L.;Yang, Yao-Lun;Chen, How-Huan;Lee, Youngung;Jung, Jae Hoon;Lee, Changhoon
    • The Bulletin of The Korean Astronomical Society
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    • v.44 no.2
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    • pp.68.1-68.1
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    • 2019
  • Turbulence plays a crucial role in controlling star formation as it produces density fluctuation as well as non-thermal pressure against gravity. Therefore, turbulence controls the mode and tempo of star formation. However, despite a plenty of previous studies, the properties of turbulence remain poorly understood. As part of the Taeduk Radio Astronomy Observatory (TRAO) Key Science Program (KSP), "mapping Turbulent properties In star-forming MolEcular clouds down to the Sonic scale (TIMES; PI: Jeong-Eun Lee)", we mapped the Orion A and the Ophiuchus clouds, in three sets of lines (13CO 1-0/C18O 1-0, HCN 1-0/HCO+ 1-0, and CS 2-1/N2H+ 1-0) with a high-velocity resolution (~0.1 km/s) using the TRAO 14-m telescope. The mean Trms for the observed maps are less than 0.25 K, and all these maps show uniform Trms values throughout the observed area. These homogeneous and high signal-to-noise ratio data provide the best chance to probe the nature of turbulence in two different star-forming clouds, the Orion A and Ophiuchus clouds. We present comparisons between the line intensities of different molecular tracers as well as the results of a Principal Component Analysis (PCA).

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Reevaluation of hydrogen gas dissolved cleaning solutions in single wafer megasonic cleaning

  • Kim, Hyeok-Min;Gang, Bong-Gyun;Lee, Seung-Ho;Kim, Jeong-In;Lee, Hui-Myeong;Park, Jin-Gu
    • Proceedings of the Materials Research Society of Korea Conference
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    • 2009.11a
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    • pp.34.1-34.1
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    • 2009
  • 1970년대 WernerKern에 의해서 개발된 RCA 습식 세정 공정은 이후 메가소닉 기술 개발과 더불어 현재까지반도체 세정 공정에서 필수 공정으로 알려져 있다. 하지만, 반도체패턴의 고집적화 미세화에 따라 메가소닉을 기반으로 하는 세정기술은 패턴 붕괴 및 나노 입자 제거의 한계를 드러내면서 난관에 봉착하고 있으며, 특히, 기존의 Batch식에서 매엽식으로 세정 방식이 전환은 새로운 개념의 메가소닉 기술 개발을 요구하게 되었다. 메가소닉을 사용한습식 세정공정은 메가소닉에 의한 캐비테이션 효과 (Cavitation Effect)에 따른 충격파 및음압 (Acoustic Streaming)에 의한 입자제거를 주요 메커니즘으로 한다. 메가소닉 주파수와 Boundary Layer 두께는, $\delta=\surd(2v/\omega)$($\delta$=두께, v=유체속도), $\omega=2{\pi}f$ (f=주파수), 으로 표현할 수 있다. 위의 식에 따르면, 메가소닉을 이용한 세정공정에서 주파수가 높아질수록 Boundary Layer의 두께가 감소하며, 이는제거 가능한 입자의 크기가 작아짐을 의미하며, 다시말해, 1 MHz 보다 2 MHz 메가소닉 세정장비에서 미세 입자 세정에 유리함을 예상할 수 있다. 본연구에서는 매엽식 세정장비를 사용하여, 1MHz 및 2MHz 콘-타입 (Cone-Type) 메가소닉 장치를 100nm이하 세정 입자에 대한 입자 제거효율을 평가하였다. 입자 제거 효율을 평가하기 위하여, 표준 형광입자(63nm/104nm 형광입자, Duke Scientifics, USA)를각각 IPA에 분산시킨 후, 실리콘 쿠폰 웨이퍼 ($20mm{\times}20mm$)를 일정시간 동안 Dipping 한 후, 고순도 질소로 건조시켜 오염하였다. 매엽식 세정장비(Aaron, Korea)에 1MHz와 2MHz의 콘-타입메가소닉 발진기 (Durasonic, Korea)를 각각 장착하였다.입자 오염 및 세정 후 입자 개수 측정 및 오염입자의 Mapping은 형광현미경 (LV100D, Nikon, Japan)과 소프트웨어(Image-proPlus, MediaCybernetics, USA)를 사용하여 평가하였으며, Hydrophone을 사용하여 메가소닉에서 발생되는 음압의 균일도를 각 조건에서 측정하였다. 각각의 세정공정은 1MHz와 2MHz 메가소닉 발진기 각각에서 1W, 3W, 5W 파워로 1분간 처리하였으며, 매질을 초순수를 사용하였다. 104nm 형광 입자는 1MHz 와 2 MHz 메가소닉 세정기와 모든 세정 공정조건에서 약 99%의 세정효율인 반면, 63nm 형광입자의 경우는 전체적인세정 결과가 80% 대로 감소하였다. 본 연구를 통하여, 입자크기의 미세화에 따른 입자제거효율이 크게 감소 하는 것을 확인할 수 있으며, 기존 Batch식 메가소닉 대비 단시간 및 낮은 전압에서 동일 혹은높은 세정 효율을 얻었다. 다만, 1MHz와 2MHz 메가소닉에서의 세정력은 큰 차이를 관찰 할 수 없었는데, 주파수변화에 따른 세정효율 측정을 위하여 미세 입자를 사용한 추가 실험이 필요 할 것이다.

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