Phylogenetic Analysis of Apple scar skin viroid Isolates in Korea |
Cho, Kang Hee
(National Institute of Horticultural and Herbal Science, Rural Development Administration)
Kim, In-Soo (National Institute of Horticultural and Herbal Science, Rural Development Administration) Kil, Eui-Joon (Department of Genetic Engineering, Sungkyunkwan University) Park, Seo Jun (National Institute of Horticultural and Herbal Science, Rural Development Administration) Kim, Se Hee (National Institute of Horticultural and Herbal Science, Rural Development Administration) Choi, In-Myung (National Institute of Horticultural and Herbal Science, Rural Development Administration) Kim, Dae-Hyun (National Institute of Horticultural and Herbal Science, Rural Development Administration) |
1 | Cambell, A. and Sparks, T. R. 1976. Experiments with dapple apple virus. Acta Hortic. 67: 261-264. |
2 | Diener, T. O. 1987. The viroids.Plenum Press, New York and London. |
3 | Di Serio, D. F., Aparicio, F., Alioto, D., Ragozzino, A. and Flores, R. 1996. Identification and molecular properties of a 306-nucleotide viroid associated with apple dimple fruit disease. J. Gen. Virol. 77: 2833-2837. DOI |
4 | Gambino, G., Perrone, I. and Gribaudo, I. 2008. A rapid and effective method for RNA extraction from different tissues of grapevine and other woody plants. Phytochem. Anal. 19: 520-525. DOI |
5 | Hashimoto, J. and Koganezawa, H. 1987. Nucleotide sequence and secondary structure of apple scar skin viroid. Nucl. Acids Res. 15: 7045-7052. DOI |
6 | Kwon, M. J., Hwang, S. L., Lee, S. J., Lee, D. H. and Lee, J. Y. 2002. Detection and distribution of the apple scar skin viroid-Korean strain (ASSVd-K) from apples cultivated in Korea. J. Plant Pathol. 18: 342-344. DOI |
7 | Lee, G., Kim, J. H., Kim, H. R., Shin, I. S., Cho, K. H., Kim, S. H., Shin, J. and Kim, D. H. 2013. Production system of virus-free apple plants using heat treatment and shoot tip culture. Plant Dis. 19: 288-293. DOI |
8 | Lee, J. H., Park, J. K., Lee, D. H., Uhm, J. Y., Ghim, S. Y. and Lee, J. Y. 2001.Occurrence of apple scar skin viroid-Korean strain (ASSVd-K) in apples cultivated in Korea. Plant Pathol. J. 17: 300-304. |
9 | Millikan, D. F. and Martin, W. R. 1956. An unusual fruit dimple symptom in apple. Plant Dis. Rep. 40: 229-230. |
10 | Ministry of Agriculture, Food and Rural Affairs (MAFRA). 2015. MAFRA yearbook. Agriculture statistics, 2015. |
11 | Ohtsuka, Y. 1938. On Manshu-sabika-byo of apple, graft transmission and symptom variation in cultivars. J. Jpn. Soc. Hortic. Sic. 9: 282-286. DOI |
12 | Tamura, K., Stecher, G., Peterson, D., Filipski, A. and Kumar, S. 2013. MEGA6: molecular evolutionary genetics analysis version 6.0. Mol. Biol. Evol. 30: 2725-2729. DOI |
13 | Yamaguchi, A. and Yanase, H. 1976. Possible relationship between the causal agent of dapple apple and scar skin. Acta Hort. 67: 249-254. |
14 | Zhu, S. F., Hadidi, A., Hammond, R. W., Yang, X. and Hansen, A. J. 1995. Nucleotide sequence and secondary structure of pome fruit viroids from dapple apple diseased apples, pear rusty skin diseased pears, and apple scar skin symptomless pears. Acta Hort. 386: 554-559. |