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http://dx.doi.org/10.5808/GI.2013.11.1.52

Eukaryotic DNAJ/K Database: A Comprehensive Phylogenomic Analysis Platform for the DNAJ/K Family  

Cheong, Kyeongchae (Fungal Bioinformatics Laboratory, Seoul National University)
Choi, Jaehyuk (Center for Fungal Pathogenesis, Seoul National University)
Choi, Jaeyoung (Fungal Bioinformatics Laboratory, Seoul National University)
Park, Jongsun (Fungal Bioinformatics Laboratory, Seoul National University)
Jang, Suwang (Fungal Bioinformatics Laboratory, Seoul National University)
Lee, Yong-Hwan (Fungal Bioinformatics Laboratory, Seoul National University)
Publication Information
Genomics & Informatics / v.11, no.1, 2013 , pp. 52-54 More about this Journal
Abstract
Proteins in DNAJ/K families are ubiquitous, from prokaryotes to eukaryotes, and function as molecular chaperones. For systematic phylogenomics of the DNAJ/K families, we developed the Eukaryotic DNAJ/K Database (EDD). A total of 12,908 DNAJs and 4,886 DNAKs were identified from 339 eukaryotic genomes in the EDD. Kingdom-wide comparison of DNAJ/K families provides new insights on the evolutionary relationship within these families. Empowered by 'class', 'cluster', and 'taxonomy' browsers and the 'favorite' function, the EDD provides a versatile platform for comparative genomic analyses of DNAJ/K families.
Keywords
database; HSP40 heat-shock proteins; HSP70 heat-shock proteins;
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