Convolutional Neural Network-Based Automatic Segmentation of Substantia Nigra on Nigrosome and Neuromelanin Sensitive MR Images |
Kang, Junghwa
(Division of Biomedical Engineering, Hankuk University of Foreign Studies)
Kim, Hyeonha (Department of Intelligent Precision Healthcare Convergence, Sungkyunkwan University) Kim, Eunjin (Department of Electrical and Computer Engineering, Sungkyunkwan University) Kim, Eunbi (Division of Biomedical Engineering, Hankuk University of Foreign Studies) Lee, Hyebin (Department of Radiology, Seoul St. Mary's Hospital, College of Medicine, The Catholic University of Korea) Shin, Na-young (Department of Radiology, Seoul St. Mary's Hospital, College of Medicine, The Catholic University of Korea) Nam, Yoonho (Division of Biomedical Engineering, Hankuk University of Foreign Studies) |
1 | Noh H, Hong S, Han B. Learning deconvolution network for semantic segmentation. In Proceedings of the IEEE International Conference on Computer Vision, 2015:1520-1528 |
2 | Milletari F, Navab N, Ahmadi SA. V-net: Fully convolutional neural networks for volumetric medical image segmentation. In 2016 Fourth International Conference on 3D Vision (3DV) IEEE, 2016:565-571 |
3 | Nam Y, Gho SM, Kim DH, Kim EY, Lee J. Imaging of nigrosome 1 in substantia nigra at 3T using multiecho susceptibility map-weighted imaging (SMWI). J Magn Reson Imaging 2017;46:528-536 DOI |
4 | Sung YH, Lee J, Nam Y, et al. Differential involvement of nigral subregions in idiopathic parkinson's disease. Hum Brain Mapp 2018;39:542-553 DOI |
5 | Sofic E, Paulus W, Jellinger K, Riederer P, Youdim MB. Selective increase of iron in substantia nigra zona compacta of parkinsonian brains. J Neurochem 1991;56:978-982 DOI |
6 | Louis ED, Benito-Leon J. Alzheimer's disease, Parkinson's disease and essential tremor: three common degenerative diseases with shared mechanisms? Eur J Neurol 2010;17:765-766 DOI |
7 | Ungerstedt U. 6-Hydroxy-dopamine induced degeneration of central monoamine neurons. Eur J Pharmacol 1968;5:107-110 DOI |
8 | Reimao S, Pita Lobo P, Neutel D, et al. Substantia nigra neuromelanin magnetic resonance imaging in de novo Parkinson's disease patients. Eur J Neurol 2015;22:540-546 DOI |
9 | Cho ZH. Review of recent advancement of ultra high field magnetic resonance imaging: from anatomy to tractography. Investig Magn Reson Imaging 2016;20:141-151 DOI |
10 | French ED, Dillon K, Wu X. Cannabinoids excite dopamine neurons in the ventral tegmentum and substantia nigra. Neuroreport 1997;8:649-652 DOI |
11 | Garcia-Garcia A, Orts-Escolano S, Oprea S, Villena-Martinez V, Garcia-Rodriguez J. A review on deep learning techniques applied to semantic segmentation. arXiv preprint. arXiv:1704.06857, 2017 |
12 | Sudre CH, Li W, Vercauteren T, Ourselin S, Jorge Cardoso M. Generalised dice overlap as a deep learning loss function for highly unbalanced segmentations. Deep Learn Med Image Anal Multimodal Learn Clin Decis Support (2017) 2017;2017:240-248 |
13 | Lee D, Lee J, Ko J, Yoon J, Ryu K, Nam Y. Deep learning in MR image processing. Investig Magn Reson Imaging 2019;23:81-99 DOI |
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