Complete mitochondrial genome of Nyctalus aviator and phylogenetic analysis of the family Vespertilionidae |
Lee, Seon-Mi
(Animal Resources Division, National Institute of Biological Resources)
Lee, Mu-Yeong (DNA Analysis Division, Seoul Institute, National Forensic Service) Kim, Sun-sook (Division of Basic Research, National Institute of Ecology) Kim, Hee-Jong (Chungnam Wild Animal Rescue Center, Kongju National University) Jeon, Hye Sook (Animal Resources Division, National Institute of Biological Resources) An, Junghwa (Animal Resources Division, National Institute of Biological Resources) |
1 | Simmons, N.B., K.L. Seymour, J. Habersetzer and G.F. Gunnell. 2008. Primitive Early Eocene bat from Wyoming and the evolution of flight and echolocation. Nature 451(7180):818-821. DOI |
2 | Tamura, K., G. Stecher, D. Peterson, A. Filipski and S. Kumar. 2013. MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0. Mol. Biol. Evol. 30:2725-2729. DOI |
3 | Tillich, M., P. Lehwark, T. Pellizzer, E.S. Ulbricht-Jones, A. Fischer, R. Bock and S. Greiner. 2017. GeSeq - versatile and accurate annotation of organelle genomes. Nucleic Acids Res. 45(W1):W6-W11. DOI |
4 | Tsytsulina, K. 2008. Nyctalus aviator. The IUCN Red List of Threatened Species 2008: e.T14921A4474887. [available from: http://dx.doi.org/10.2305/IUCN.UK.2008.RLTS.T14921A4474887.en, accessed 24 September 2018]. DOI |
5 | Wyman, S.K., R.K. Jansen and J.L. Boore. 2004. Automatic annotation of organellar genomes with DOGMA. Bioinformatics 20:3252-3255. DOI |
6 | Yu, J.N., N. Azuma and S. Abe. 2012. Genetic differentiation between collections of hatchery and wild masu salmon (Oncorhynchus masou) inferred from mitochondrial and microsatellite DNA analysis. Environ. Biol. Fish. 94:259-271. DOI |
7 | Baek, S.Y., E.H. Choi, K.H. Jang, S.H. Ryu, S.M. Park, H.Y. Suk, C.Y. Chang and U.W. Hwang. 2014. Complete mitochondrial genomes of Carcinoscorpius rotundicauda and Tachypleus tridentatus (Xiphosura, Arthropoda) and implications for chelicerate phylogenetic studies. Int. J. Biol. Sci. 10(5):479-489. DOI |
8 | Benson, G. 1999. Tandem repeats finder: a program to analyze DNA sequences. Nucl. Acid Res. 27(2):573-580. DOI |
9 | Botero-Castro, F., M.K. Tilak, F. Justy, F. Catzeflis, F. Delsuc and E.J.P. Douzery. 2013. Next-generation sequencing and phylogenetic signal of complete mitochondrial genomes for resolving the evolutionary history of leaf-nosed bats (Phyllostomidae). Mol. Phylogenet. Evol. 69(3):728-739. DOI |
10 | Fenton, M.B., L. Acharya, D. Audet, M.B.C. Hickey, C. Merriman, M.K. Obrist, D.M. Syme and B. Adkins. 1992. Phyllostomid bats (Chiroptera: Phyllostomidae) as indicators of habitat disruption in the Neotropics. Biotropica 24(3):440-446. DOI |
11 | Knudsen, B., A.B. Kohn, B. Nahir, C.S. McFadden and L.L. Moroz. 2006. Complete DNA sequence of the mitochondrial genome of the sea-slug, Aplysia californica: conservation of the gene order in Euthyneura. Mol. Phylogenet. Evol. 38(2):459-469. DOI |
12 | Fukui, D. 2009. Nyctalus aviator. In: S.D. Ohdachi, Y. Ishibashi, M.A. Iwasa and T. Saitoh (eds), The Wild Mammals of Japan. Shoukado Press, Kyoto. pp. 74-75. |
13 | Hiendleder, S., K. Mainz, Y. Plante and H. Lewalski. 1998. Analysis of mitochondrial DNA indicates that domestic sheep are derived from two different ancestral maternal sources: no evidence for contributions from urial and argali sheep. J. Hered. 89(2):113-120. DOI |
14 | Kim, K., S.C. Lee, J. Lee, Y. Yu, K. Yang, B.S. Choi, H.J. Koh, N.E. Waminal, H.I. Choi, N.H. Kim, W. Jang, H.S. Park, J. Lee, H.O. Lee, H.J. Joh, H.J. Lee, J.Y. Park, S. Perumal, M. Jayakodi, Y.S. Lee, B. Kim, D. Copetti, S. Kim, S. Kim, K.B. Lim, Y.D. Kim, J. Lee, K.S. Cho, B.S. Park, R.A. Wing and T.J. Yang. 2015. Complete chloroplast and ribosomal sequences for 30 accessions elucidate evolution of Oryza AA genome species. Sci. Rep. 5:15655. DOI |
15 | Kunz, T.H., E. Braun de Torrez, D. Bauer, T. Lobova and T.H. Fleming. 2011. Ecosystem services provided by bats. Ann. N. Y. Acad. Sci. 1223(1):1-38. DOI |
16 | Laslett, D. and B. Canback. 2008. ARWEN, a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences. Bioinformatics 24(2):172-175. DOI |
17 | Lobry, J.R. 1996. Asymmetric substitution patterns in the two DNA strands of bacteria. Mol. Biol. Evol. 13(5):660-665. DOI |
18 | Mayfield, J.E. and J.F. McKenna. 1978. AT rich sequences in vertebrate DNA. Chromosoma 67(2):157-163. DOI |
19 | O'shea, T.J., P.M. Cryan, D.T. Hayman, R.K. Plowright and D.G. Streicker. 2016. Multiple mortality events in bats: a global review. Mammal Rev. 46(3):175-190. DOI |
20 | O'shea, T.J., P.M. Cryan, A.A. Cunningham, A.R. Fooks, D.T. Hayman, A.D. Luis, A.J. Peel, R.K. Plowrigh and J.L. Wood. 2014. Bat flight and zoonotic viruses. Emerg. Infect. Dis. 20(5):741-745. DOI |
21 | Qian, K., D. Yu, H. Cheng, K.B. Storey and J. Zhang. 2016. The complete mitochondrial genome of Nyctalus noctula (Chiroptera: Vespertilionidae). Mitochondrial DNA A DNA Mapp. Seq. Anal 27(4):2365-2366. |
22 | Simmons, N.B. 2005. Order Chiroptera. In: D.E. Wilson and D.M. Reeder(eds), Mammal Species of the World: A Taxonomic and Geographic Reference. Hopkins University Press, Maryland. pp. 312-529. |