Browse > Article

Variation in Microbial Biomass and Community Structure in Sediments of Peter the Great Bay (Sea of Japan/East Sea), as Estimated from Fatty Acid Biomarkers  

Zhukova Natalia V. (Institute of Marine Biology, Far East Branch, Russian Academy of Sciences)
Publication Information
Ocean Science Journal / v.40, no.3, 2005 , pp. 145-153 More about this Journal
Abstract
Variation in the microbial biomass and community structure found in sediment of heavily polluted bays and the adjacent unpolluted areas were examined using phospholipid fatty acid analysis. Total microbial biomass and microbial community structure were responding to environmental determinants, sediment grain size, depth of sediment, and pollution due to petroleum hydrocarbons. The marker fatty acids of microeukaryotes and prokaryotes - aerobic, anaerobic, and sulfate-reducing bacteria - were detected in sediments of the areas studied. Analysis of the fatty acid profiles revealed wide variations in the community structure in sediments, depending on the extent of pollution, sediment depth, and sediment grain size. The abundance of specific bacterial fatty acids points to the dominance of prokaryotic organisms, whose composition differed among the stations. Fatty acid distributions in sediments suggest the high contribution of aerobic bacteria. Sediments of polluted sites were significantly enriched with anaerobic bacteria in comparison with clean areas. The contribution of this bacterial group increased with the depth of sediments. Anaerobic bacteria were predominantly present in muddy sediments, as evidenced from the fatty acid profiles. Relatively high concentrations of marker fatty acids of sulfate-reducing bacteria were associated with organic pollution in this site. Specific fatty acids of microeukaryotes were more abundant in surface sediments than in deeper sediment layers. Among the microeukaryotes, diatoms were an important component. Significant amounts of bacterial biomass, the predominance of bacterial biomarker fatty acids with abundance of anaerobic and sulfate-reducing bacteria are indicative of a prokaryotic consortium responsive to organic pollution.
Keywords
microbial community structure; sediments; fatty acids; biomarkers;
Citations & Related Records
연도 인용수 순위
  • Reference
1 Bligh, E.C. and W.J. Dyer. 1959. A rapid method of total lipid extraction and purification. Can. J. Biochem. Physiol., 37, 911-917   DOI
2 Carreau, J.P. and J.P. Dubacq. 1978. Adaptation of macro-scale method to the micro-scale for fatty acid methyl transesterification of biological lipid extracts. J. Chromatogr., 151, 384-390   DOI   ScienceOn
3 Findlay, R.H., M.B. Trexler, J.B Guckert, and D.C. White. 1990. Laboratory study of disturbance in marine sediments: Response of a microbial community. Mar. Ecol. Prog. Ser., 62, 121-133   DOI
4 Khristoforova, N.K., E.V. Zhuravel, N.I. Grigareva, E.N. Chernova, and M.A. Risunova. 2001. Evaluation of water quality of Vostok Bay, the Sea of Japan. Problemy regionalnoi ekologii, 2, 59-69. (In Russian)
5 Rajendran, N., O. Matsuda, R. Rajendran, and Y. Urushigawa. 1997. Comparative description of microbial community structure in surface sediments of eutrophic bays. Mar. Pollut. Bull., 34, 26-33   DOI   ScienceOn
6 Atlas, R.M. 1981. Microbial degradation of petroleum hydrocarbons: An environmental perspective. Microbiol. Rev., 45, 180-209
7 White, D.C., W.M. Davis, J.S. Nickels, J.D. King, and R.J. Bobie. 1979. Determination of the sedimentary microbial biomass by extractable lipid phosphate. Oecologia, 40, 51-62   DOI
8 Paerl, H.W. 1998. Structure and function of anthropogenically altered microbial communities in coastal waters. Curr. Opin. Microbiol., 1, 296-302   DOI   PUBMED   ScienceOn
9 Aries, E., P. Doumenq, J. Artaud, J. Molinet, and J.C. Bertrand. 2001. Occurrence of fatty acids linked to non-phospholipid compounds in the polar fraction of a marine sedimentary extract from Carteau cove, France. Org. Geochem., 32, 193-197   DOI   ScienceOn
10 Findlay, R.H. and F.C. Dobbs. 1993. Quantitative description of microbial communities using lipid analysis. p. 271-284. In: Handbook of Methods in Aquatic Microbial Ecology, ed. by P.F. Kemp, B.F. Sherr, E.B. Sherr and J.J. Cole. Lewis Publishers, Boca Raton
11 Naumov, Y.A. 2003. On the oil pollution of the eastern part of Peter the Great Bay (Japan Sea) and efficient usage of its resources. Izvestiya TINRO, 132, 331-338
12 Findlay, R.H. and L. Watling. 1998. Seasonal variation in the structure of a marine benthic microbial community. Microb. Ecol., 36, 23-30   DOI   ScienceOn
13 Langworthy, D.E., R.D. Stapleton, G.S. Sayler, and R.H. Findlay. 2002. Lipid analysis of the response of a sedimentary microbial community to polycyclic aromatic hydrocarbons. Microb. Ecol., 43, 189-198   DOI   ScienceOn
14 Carman, K.R., J.W. Fleeger, J.C. Means, S.M. Pomarico, and D.J. McMillin. 1995. Experimental investigation of the effects of polynuclear aromatic hydrocarbons on an estuarine sediment food web. Mar. Environ. Res., 40, 289-318   DOI   ScienceOn
15 Gillan, F.T. and R.W. Hogg. 1984. A method for the estimation of bacterial biomass and community structure in mangroveassociated sediments. J. Microbiol. Methods, 2, 275-293   DOI   ScienceOn
16 Guckert, J.B., C.P. Antworth, P.D. Nichols, and D.C. White. 1985. Phospholipid ester-linked fatty acid profile as reproducible assays for changes in prokaryotic community structure of estuarine sediments. FEMS Microbiol. Ecol., 31, 147-158   DOI
17 Macalady, J.L., E.E. Mack, D.C. Nelson, and K.M. Scow. 2000. Sediment Microbial community structure and mercury methylation in mercury-polluted Clear Lake, California. Appl. Environ. Microbiol., 66, 1479-1488   DOI   ScienceOn
18 White, D.C. 1988. Validation of quantitative analysis for microbial biomass, community structure, and metabolic activity. Arch. Hydrobiol. Erg. Limnol., 31, 1-18
19 Boscher, H.T.S., S.C. Nold, P. Wellsbury, D. Bos, W. De Graaf, R. Pel, R.J. Parkes, and T.E. Cappenberg. 1998. Direct linking of microbial populations to specific biogeochemical processes by $^{13}C$-labelling of biomarkers. Nature, 392, 801-805   DOI   ScienceOn
20 Rajendran, N., O. Matsuda, N. Imamura, and Y. Urushigawa 1992. Variation in microbial biomass and community structure in sediments of eutrophic bays as determined by phospholipid ester-linked fatty acids. Appl. Environ. Microbiol., 52, 794-801
21 Rajendran, N. and Y. Nagatomo. 1999. Seasonal changes in sedimentary microbial communities of two eutrophic bays as estimated by biomarkers. Hydrobiologia, 393, 117-125   DOI
22 Zhukova, N.V. and N.A. Aizdaicher. 1995. Fatty acid composition of 15 species of marine microalgae. Phytochemistry, 39, 351-356   DOI   ScienceOn
23 Langworthy, D.E., R.D. Stapleton, G.S. Sayler, and R.H. Findlay. 1998. Genotypic and phenotypic responses of a riverine microbial community to polycyclic aromatic hydrocarbon contamination. Appl. Environ. Microbiol., 64, 3422-3428
24 Volkman, J.K., S.W. Jeffrey, P.D. Nichols, G.I. Rogers, and C.D. Garland. 1989. Fatty acid and lipid composition of 10 species of microalgae used in mariculture. J. Exp. Mar. Biol. Ecol., 128. 219-240   DOI   ScienceOn
25 Gillan, F.T. and M.W. Sandstrom. 1985. Microbial lipids from a nearshore sediment from Bowling Green Bay, North Queensland: The fatty acid composition of intact lipid fractions. Org. Geochem., 8, 321-328   DOI   ScienceOn
26 Vaschenko, M.A. 2000. Pollution in Peter the Great Bay, Sea of Japan, and its biological consequences. Russian J. Mar. Biol., 26, 155-166   DOI   ScienceOn
27 Zhukova, N.V. and V.I. Kharlamenko. 1999. Sources of essential fatty acids in marine microbial loop. Aquat. Microb. Ecol., 17, 153-157   DOI
28 Tkalin, A.V. 1996. Chlorinated hydrocarbons in coastal bottom sediments of the Japan Sea. Environ. Pollut., 91, 183-185   DOI   ScienceOn
29 Perry, G.J., J.K. Volkman, and R.B. Johns. 1979. Fatty acids of bacterial origin in contemporary marine sediments. Geochim. Cosmochim. Acta, 43, 1715-1725   DOI   ScienceOn
30 Rutters, H., H. Sass, H. Cypionka, and J. Rullkotter. 2002. Microbial communities in a Wadden Sea sediment core-clues from analyses of intact glyceride lipids, and released fatty acids. Org. Geochem., 33, 803-813   DOI   ScienceOn
31 Imbs, A.B., V.I. Kharlamenko, and P.S. Dmitrenok. 1994. Sedimentary microbial community structure of an oilfield, as determined from lipid markers. Russian J. Mar. Biol., 20, 49-56