Purification and Characterization of Branching Specificity of a Novel Extracellular Amylolytic Enzyme from Marine Hyperthermophilic Rhodothermus marinus |
Yoon, Seong-Ae
(Center for Agricultural Biomaterials, Department of Food Science and Technology, School of Agricultural Biotechnology, Seoul National University)
Ryu, Soo-In (Research Institute of Food and Nutritional Sciences and Department of Food and Nutrition, Brain Korea 21 Project, Yonsei University) Lee, Soo-Bok (Research Institute of Food and Nutritional Sciences and Department of Food and Nutrition, Brain Korea 21 Project, Yonsei University) Moon, Tae-Wha (Center for Agricultural Biomaterials, Department of Food Science and Technology, School of Agricultural Biotechnology, Seoul National University) |
1 | Alfredsson, G. A., J. K. Kristjansson, S. Hjorleifsdottir, and K. O. Stetter. 1988. Rhodothermus marinus, gen. nov., sp. nov., a thermophilic, halophilic bacterium from submarine hot springs in Iceland. J. Gen. Microbiol. 134: 299-306 |
2 | Bjornsdottir, S. H., T. Blondal, G. O. Hreggvidsson, G. Eggertsson, S. Petursdottir, S. Hjorleifsdottir, S. H. Thorbjarnardottir, and J. K. Kristjansson. 2006. Rhodothermus marinus: Physiology and molecular biology. Extremophiles 10: 1-16 |
3 | Halldorsdottir, S., E. T. Thorolfsdottir, R. Spilliaert, M. Johansson, S. H. Thorbjarnardottir, A. Palsdottir, G. O. Hreggvidsson, J. K. Kristjansson, O. Holst, and G. Effertsson. 1998. Cloning, sequencing and overexpression of a Rhodothermus marinus gene encoding a thermostable cellulase of glycosyl hydrolase family 12. Appl. Microbiol. Biotechnol. 49: 277-284 DOI ScienceOn |
4 | Miller, G. L. 1959. Use of dinitrosalicylic acid reagent for determination of reducing sugar. Anal. Chem. 31: 426-428 DOI |
5 | Sambrook, J. and D. W. Russell. 2001. Molecular Cloning: A Laboratory Manual, 3rd Ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, U.S.A. |
6 | Vinogradov, E. and K. Bock. 1998. Structural determination of some new oligosaccharides and analysis of the branching pattern of isomaltooligosaccharides from beer. Carbohydr. Res. 309: 57-64 DOI ScienceOn |
7 | Van, T. T. K., S.-I. Ryu, K.-J. Lee, E.-J. Kim, and S.-B. Lee. 2007. Cloning and characterization of glycogen-debranching enzyme from hyperthermophilic archaeon Sulfolobus shibatae. J. Microbiol. Biotechnol. 17: 792-799 과학기술학회마을 |
8 | Yang, S.-J., H.-S. Lee, C.-S. Park, Y.-R. Kim, T.-W. Moon, and K.-H. Park. 2004. Enzymatic analysis of an amylolytic enzyme from the hyperthermophilic archaeon Pyrococcus furiosus reveals its novel catalytic properties as both an -amylase and a cyclodextrin-hydrolyzing enzyme. Appl. Environ. Microbiol. 70: 5988-5995 DOI ScienceOn |
9 | Bae, S. S., Y. J. Kim, S. H. Yang, J. K. Lim, J. H. Jeon, H. S. Lee, S. G. Kang, S.-J. Kim, and J.-H. Lee. 2006. Thermococcus onnurineus sp. nov., a hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent area at the PACMANUS field. J. Microbiol. Biotechnol. 16: 1826-1831 과학기술학회마을 |
10 | Kuriki, T., M. Yanase, H. Takata, Y. Takesada, T. Imanaka, and S. Okada. 1993. A new way of producing isomaltooligosaccharide syrup by using the transglycosylation reaction of neopullulanase. Appl. Environ. Microbiol. 59: 953-959 |
11 | Hobel, C. F. V., G. O. Hreggvidsson, V. T. Marteinsson, F. Bahrani-Mougeout, J. M. Einarsson, and J. K. Kristjansson. 2005. Cloning, expression and characterization of a highly thermostable family 18 chitinase from Rhodothermus marinus. Extremophiles 9: 53-64 DOI ScienceOn |
12 | Nunes, O. C., M. M. Donato, and M. M. da Costa. 1992. Isolation and characterization of Rhodothermus strains from S-miguel, Azores. Syst. Appl. Microbiol. 15: 92-97 |
13 | Cho, H.-Y., Y.-W. Kim, T.-J. Kim, H.-S. Lee, D.-Y. Kim, J.-W. Kim, Y.-W. Lee, S.-B. Lee, and K.-H. Park. 2000. Molecular characterization of a dimeric intracellular maltogenic amylase of Bacillus subtilis SUH4-2. Biochim. Biophys. Acta 1478: 333-340 DOI ScienceOn |
14 | Park, N.-Y., J. Cha, D.-O. Kim, and C.-S. Park. 2007. Enzymatic characterization and substrate specificity of thermostable -glycosidase from hyperthermophilic archaea, Sulfolobus shibatae, expressed in E. coli. J. Microbiol. Biotechnol. 17: 454-460 과학기술학회마을 |
15 | Bradford, M. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72: 248-254 DOI ScienceOn |
16 | Silva, Z., C. Horta, M. S. da Costa, A. P. Chung, and F. A. Rainey. 2000. Polyphasic evidence for the reclassification of Rhodothermus obamensis Sako et al. 1996 as a member of the species Rhodothermus marinus Alfredsson et al. 1988. Int. J. Syst. Evol. Microbiol. 50: 1457-1461 DOI ScienceOn |
17 | Gomes, I., J. Gomes, and W. Steiner. 2003. Highly thermostable amylase and pullulanase of the extreme thermophilic eubacterium Rhodothermus marinus: Production and partial characterization. Bioresource Technol. 90: 207-214 DOI ScienceOn |
18 | Park, J.-H., K.-H. Park, and J.-L. Jane. 2007. Physicochemical properties of enzymatically modified maize starch using 4--glucanotransferase. Food Sci. Biotechnol. 16: 902-909 과학기술학회마을 |
19 | Fang, T. Y., W.-C. Tseng, C.-J. Yu, and T.-Y. Shih. 2005. Characterization of the thermophilic isoamylase from the thermophilic archaeon Sulfolobus solfataricus ATCC 35092. J. Mol. Catal. B Enzym. 33: 99-107 DOI ScienceOn |
20 | Tonozuka, T., S. Mogi, Y. Shimura, A. Ibuka, H. Sakai, H. Matsuzawa, Y. Sakano, and T. Ohta. 1995. Comparison of primary structures and substrate specificities of two pullulan-hydrolyzing -amylases, TVA I and TVA II, from Thermoactinomyces vulgaris R-47. Biochim. Biophys. Acta 1252: 35-42 DOI ScienceOn |
21 | Murakami, T., T. Kanai, H. Takata, T. Kuriki, and T. Imanaka. 2006. A novel branching enzyme of the GH-57 family in the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1. J. Bacteriol. 188: 5915-5924 DOI ScienceOn |
22 | Van der Maarel, M. J. E. C., A. Vos, P. Sanders, and L. Dkjkhuizen. 2003. Properties of the glucan branching enzyme of the hyperthermophilic bacterium Aquifex aeolicus. Biocatal. Biotransform. 21: 199-207 DOI |
23 | Park, N.-Y., N.-I. Baek, J. Cha, S.-B. Lee, J.-H. Auh, and C.-S. Park. 2005. Production of new sucrose derivative by transglycosylation of recombinant Sulfolobus shibatae -glycosidase. Carbohydr. Res. 340: 1089-1096 DOI ScienceOn |
24 | Spilliaert, R., G. O. Hreggvidsson, J. K. Kristjansson, G. Effertsson, and A. Palsdottir. 1994. Cloning and sequencing of a Rhodothermus marinus gene, BglA, coding for a thermostable beta-glucanase and its expression in Escherichia coli. Eur. J. Biochem. 224: 923-930 DOI ScienceOn |
25 | Guan, H., P. Li, J. Imparl-Radesevich, J. Preiss, and P. Keeling. 1997. Comparing the properties of Escherichia coli branching enzyme and maize branching enzyme. Arch. Biochem. Biophys. 342: 92-98 DOI ScienceOn |
26 | Nordberg, K. E., E. Bartonek-Roxa, and O. Holst. 1997. Cloning and sequence of a thermostable multidomain xylanase from the bacterium Rhodothermus marinus. Biochim. Biophys. Acta 1353: 118-124 DOI ScienceOn |
27 | Shinohara, M. L., M. Ihara, M. Abo, M. Hashida, S. Takagi, and T. C. Beck. 2001. A novel thermostable branching enzyme from an extremely thermophilic bacterial species, Rhodothermus obamensis. Appl. Microbiol. Biotechnol. 57: 653-659 DOI ScienceOn |