1 |
Kim KY, Lee SY, Cho YS, Bang IC, Kim DS, Nam YK. Characterization and phylogeny of two -cytoskeletal actins from Hemibarbus mylodon (Cyprinidae, Cypriniformes), a threatened fish species in Korea. DNA Seq. 2008;19:87-97.
DOI
|
2 |
Kubista M, Andrade JM, Bengtsson M, Forootan A, Jonak J, Lind K, et al. The real-time polymerase chain reaction. Mol Asp Med. 2006;27:95-125.
DOI
|
3 |
Le DT, Aldrich DL, Valliyodan B, Watanabe Y, Ha CV. Evaluation of candidate reference genes for normalization of quantitative RT-PCR in soybean tissues under various abiotic stress conditions. PLoS One. 2012;7:e46487.
DOI
|
4 |
Lee SY, Kim DS, Nam YK. Genomic organization, tissue distribution and developmental expression of glyceraldehyde 3-phosphate dehydrogenase isoforms in mud loach Misgurnus mizolepis. Fish Aquat Sci. 2013;16:291-301.
|
5 |
Li R, Shen Y. An old method facing a new challenge: re-visiting housekeeping proteins as internal reference control for neuroscience research. Life Sci. 2013;92:747-51.
DOI
|
6 |
Lopez-Landavery EA, Portillo-Lopez A, Gallardo-Escarate C, Rio-Portilla MAD. Selection of reference genes as internal controls for gene expression in tissues of red abalone Haliotis rufescens (Mollusca, Vetigastropoda; Swainson, 1822). Gene. 2014;549:258-65.
DOI
|
7 |
Mao H, Wang DH, Yang WX. Involvement of metallothionein in the development of aquatic invertebrate. Aquatic Toxicol. 2012;110-111:208-13.
DOI
|
8 |
Overgard AC, Nerland AH, Patel S. Evaluation of potential reference genes for real time RT-PCR studies in Atlantic halibut (Hippoglossus hippoglossus L.); during development, in tissues of healthy and NNV-injected fish, and in anterior kidney leucocytes. BMC Mol Biol. 2010;11:36.
DOI
|
9 |
Park CJ, Kim SY. Abalone aquaculture in Korea. J Shellfish Res. 2013;32:17-9.
DOI
|
10 |
Pfaffl MW, Tichopad A, Prgomet C, Neuvians TP. Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper-Excel-based tool using pair-wise correlations. Biotechnol Lett. 2004;26:509-15.
DOI
|
11 |
Qiu R, Sun B, Fang S, Sun L, Liu X. Identification of normalization factors for quantitative real-time RT-PCR analysis of gene expression in Pacific abalone Haliotis discus hannai. Chin J Oceanol Limnol. 2013;31:421-30.
DOI
|
12 |
Radonic A, Thulke S, Mackay IM, Landt O, Siegert W, Nitsche A. Guideline to reference gene selection for quantitative real-time PCR. Biochem Biophys Res Commun. 2004;313:856-62.
DOI
|
13 |
Rainbow PS. Trace metal bioaccumulation: models, metabolic availability and toxicity. Environ Intl. 2007;33:576-82.
DOI
|
14 |
Schmittgen TD, Livak KJ. Analyzing real-time PCR data by the comparative CT method. Nat Protoc. 2008;3:1101-08.
DOI
|
15 |
Shen GM, Jiang HB, Wang XN, Wang JJ. Evaluation of endogenous references for gene expression profiling in different tissues of the oriental fruit fly Bactrocera dorsalis (Diptera: Tephritidae). BMC Mol Biol. 2010;11:76.
DOI
|
16 |
Taylor DA, Thompson EL, Nair SV, Raftos DA. Differential effects of metal contamination on the transcript expression of immune- and stress-response genes in the Sydney rock oyster, Saccostrea glomerata. Environ Pollt. 2013;178:65-71.
DOI
|
17 |
Silva-Aciares F, Zapata M, Tournois J, Moraga D, Riquelme C. Identification of genes expressed in juvenile Haliotis rufescens in response to different copper concentrations in the north of Chile under controlled conditions. Mar Pollut Bull. 2011;62:2671-80.
DOI
|
18 |
Silver N, Best S, Jiang J, Thein SL. Selection of housekeeping genes for gene expression studies in human reticulocytes using real-time PCR. BMC Mol Biol. 2006;7:33.
DOI
|
19 |
Song Y, Choi MS, Lee JY, Jang DJ. Regional background concentrations of heavy metals (Cr, Co, Ni, Cu, Zn, Pb) in coastal sediments of the South Sea of Korea. Sci Total Environ. 2014;482-483:80-91.
DOI
|
20 |
Turkmen M, Turkmen A, Tepe Y, Ates A, Gokkus K. Determination of metal contaminations in sea foods from Marmara, Aegean and Mediterranean seas: twelve fish species. Food Chem. 2008;108:794-800.
DOI
|
21 |
Udvardi MK, Czechowski T, Scheible WR. Eleven golden rules of quantitative RT-PCR. Plant Cell. 2008;20:1736-7.
DOI
|
22 |
Vandesompele J, De Preter K, Pattyn F, Poppe B, Van Roy N, De Paepe A, et al. Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol. 2002;3:1-11. research0034.
|
23 |
Wan Q, Whang I, Choi CY, Lee JS, Lee J. Validation of housekeeping genes as internal controls for studying biomarkers of endocrine-disrupting chemicals in disk abalone by real-time PCR. Comp Biochem Physiol C. 2011;153:259-68.
|
24 |
Zheng WJ, Sun L. Evaluation of housekeeping genes as references for quantitative real time RT-PCR analysis of gene expression in Japanese flounder (Paralichthys olivaceus). Fish Shellfish Immunol. 2011;30:638-45.
DOI
|
25 |
Wang WX, Rainbow PS. Influence of metal exposure history on trace metal uptake and accumulation by marine invertebrates. Ecotoxicol Environ Saf. 2005;61:145-59.
DOI
|
26 |
Yuan M, Lu Y, Zhu X, Wan H, Shakeel M, Zhan S, et al. Selection and evaluation of potential reference genes for gene expression analysis in the brown planthopper, Nilaparvata lugens (Hemiptera: Delphacidae) using reverse-transcription quantitative PCR. PLoS One. 2014;9:e86503.
DOI
|
27 |
Zhang Z, Hu J. Development and validation of endogenous reference genes for expression profiling of medaka (Oryzias latipes) exposed to endocrine disrupting chemicals by quantitative real-time RT-PCR. Toxicol Sci. 2007;95:356-68.
DOI
|
28 |
Zhu L, Altmann SW. mRNA and 18S-RNA coapplication-reverse transcription for quantitative gene expression analysis. Anal Biochem. 2005;345:102-9.
DOI
|
29 |
Amiard JC, Amiard-Triquet C, Barka S, Pellerin J, Rainbow PS. Metallothioneins in aquatic invertebrates: their role in metal detoxification and their use as biomarkers. Aquat Toxicol. 2006;76:160-202.
DOI
|
30 |
Andersen CL, Jensen JL, Orntoft TF. Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets. Cancer Res. 2004;64:5245-50.
DOI
|
31 |
Bustin SA, Benes V, Garson JA, Hellemans J, Huggett J, Kubista M, et al. The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments. Clin Chem. 2009;55:611-22.
DOI
|
32 |
Cho YS, Lee SY, Kim KH, Nam YK. Differential modulations of two glyceraldehyde 3-phosphate dehydrogenase mRNAs in response to bacterial and viral challenges in a marine teleost Oplegnathus fasciatus (Perciformes). Fish Shellfish Immunol. 2008;25:472-6.
DOI
|
33 |
Cho YS, Kim DS, Nam YK. Isoform-specific response of two GAPDH paralogs during bacterial challenge and metal exposure in mud loach (Misgurnus mizolepis; Cypriniformes) kidney and spleen. J Fish Pathol. 2011;24:269-78.
DOI
|
34 |
Hellemans J, Mortier G, De Paepe A, Speleman F, Vandesompele J. qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data. Genome Biol. 2007;8:R19.
DOI
|
35 |
De Santis C, Smith-Keune C, Jerry DR. Normalizing RT-qPCR data: are we getting the right answers? An appraisal of normalization approaches and internal reference genes from a case study in the finfish Lates calcarifer. Mar Biotechnol. 2011;13:170-80.
DOI
|
36 |
Doak SH, Zair Z. Real-time reverse-transcription polymerase chain reaction: technical considerations for gene expression analysis. In: Parry JM, Parry EM, editors. Genetic toxicology: principles and methods, methods in molecular biology. New York: Springer; 2012. p. 251-70.
|
37 |
Du Y, Zhang L, Xu F, Huang B, Zhang G, Li L. Validation of housekeeping genes as internal controls for studying gene expression during Pacific oyster (Crassostrea gigas) development by quantitative real-time PCR. Fish Shellfish Immunol. 2013;34:939-45.
DOI
|
38 |
Fernandes JMO, Mommens M, Hagen O, Babiak I, Solberg C. Selection of suitable reference genes for real-time PCR studies of Atlantic halibut development. Comp Biochem Physiol B. 2008;150:23-32.
DOI
|
39 |
Guenin S, Mauriat M, Pelloux J, Van Wuytswinkel O, Bellini C, Gutierrez L. Normalization of qRT-PCR data: the necessity of adopting a systematic, experimental conditions-specific, validation of references. J Exp Bot. 2009;60:487-93.
DOI
|
40 |
Hwang PP, Lee TH, Lin LY. Ion regulation in fish gills: recent progress in the cellular and molecular mechanisms. Am J Physiol Regul Integr Comp Physiol. 2011;301:R28-47.
DOI
|
41 |
Kim KY, Lee SY, Cho YS, Bang IC, Kim KH, Kim DS, et al. Molecular characterization and mRNA expression during metal exposure and thermal stress of copper/zinc- and manganese-superoxide dismutases in disk abalone, Haliotis discus. Fish Shellfish Immunol. 2007;23:1043-59.
DOI
|