한국미생물·생명공학회지 (Microbiology and Biotechnology Letters)

  • 제52권2호
  • /
  • Pages.208-210
  • /
  • 2024
  • /
  • 1598-642X(pISSN)
  • /
  • 2234-7305(eISSN)
한국미생물·생명공학회 (The Korean Society for Microbiology and Biotechnology)
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Complete Genome Sequence of Spirosoma sp. SC4-14 Isolated from the Rhizosphere of pepper (Capsicum annuum L.)

  • Jihye Jung (Agricultural Microbiology Division, National Institute of Agricultural Sciences (NAAS), Rural Development Administration (RDA)) ;
  • Dawon Jo (Agricultural Microbiology Division, National Institute of Agricultural Sciences (NAAS), Rural Development Administration (RDA)) ;
  • Myoungjoo Riu (Agricultural Microbiology Division, National Institute of Agricultural Sciences (NAAS), Rural Development Administration (RDA)) ;
  • Seongho Ahn (Agricultural Microbiology Division, National Institute of Agricultural Sciences (NAAS), Rural Development Administration (RDA)) ;
  • Do-Hyun Kim (Agricultural Microbiology Division, National Institute of Agricultural Sciences (NAAS), Rural Development Administration (RDA))
  • 투고 : 2024.03.19
  • 심사 : 2024.04.26
  • 발행 : 2024.06.28
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초록

Spirosoma sp. SC4-14 was isolated from the rhizosphere soil of pepper (Capsicum annuum L.). The genome of the strain SC4-14 consists of a single chromosome with one plasmid, total size of 8,104,799 bp and the DNA G+C-content is 48.2%. This chromosome contains 6,479 protein-coding sequences and 41 tRNA and 6 rRNA genes.

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과제정보

This research was supported by grants from the Agenda Project (Project No. PJ01727502) of the Rural Development Administration (RDA), Republic of Korea.

참고문헌

  1. Ten LN, Okiria J, Lee J-J, Lee S-Y, Park S, Lee DS, et al. 2018. Spirosoma terrae sp. nov., Isolated from Soil from Jeju Island, Korea. Curr. Microbiol. 75: 492-498. 
  2. Lee JJ, Elderiny N, Lee SY, Lee DS, Kim MK, Ten LN, et al. 2017. Spirosoma gilvum sp. nov., Isolated from Beach Soil. Curr. Microbiol. 74: 1425-1431. 
  3. Maeng S, Park Y, Han JH, Lee SE, Zhang J, Kim M-K, et al. 2020. Spirosoma aureum sp. nov., and Hymenobacter russus sp. nov., radiation-resistant bacteria in Cytophagales order isolated from soil. Antonie van Leeuwenhoek. 113: 2201-2212. 
  4. Joo ES, Lee J-J, Cha S, Jheong W, Seo T, Lim S, et al. 2015. Spirosoma pulveris sp. nov., a bacterium isolated from a dust sample collected at Chungnam province, South Korea. J. Microbiol. 53: 750-755. 
  5. Zhang L, Zhou X-Y, Su X-J, Hu Q, Jiang J-D. 2019. Spirosoma sordidisoli sp. nov., a propanil-degrading bacterium isolated from a herbicide-contaminated soil. Antonie van Leeuwenhoek. 112: 1523-1532. 
  6. Kim MK, Kim J-Y, Kim SJ, Kim MJ, Lee JY, Kim C-G, et al. 2017. Complete genome sequence of Spirosoma pulveris JSH 5-14T, a bacterium isolated from a dust sample. Mol. Cell. Toxicol. 13: 373-378. 
  7. Lee JJ, Kang MS, Joo ES, Kim MK, Im WT, Jung HY, et al. 2015. Spirosoma montaniterrae sp. nov., an ultraviolet and gamma radiation-resistant bacterium isolated from mountain soil. J. Microbiol. 53: 429-434. 
  8. Kim D-U, Kim J-Y, Kim SJ, Kim MJ, Lee JY, Kim MK. 2017. Complete genome sequence of Spirosoma aerolatum KACC 17939 T, a bacterium related to the DNA repair. Korean J. Microbiol. 53: 230-232. 
  9. Rojas J, Ambika Manirajan B, Ratering S, Suarez C, Geissler-Plaum R, Schnell S. 2020. Spirosoma endbachense sp. nov., isolated from a natural salt meadow. Int. J. Syst. Evol. Microbiol. 71. 
  10. Yoon SH, Ha SM, Kwon S, Lim J, Kim Y, Seo H, Chun J. 2017. Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies. Int. J. Syst. Evol. Microbiol. 67: 1613-1617.