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Complete Genome Sequence of Weissella koreensis DMW12 Isolated from Kimchi, Traditional Korean Fermented Vegetables

  • Do-Won Jeong (Department of Food and Nutrition, Dongduk Women's University)
  • Received : 2024.02.20
  • Accepted : 2024.03.13
  • Published : 2024.03.28

Abstract

Weissella koreensis DMW12 was isolated from kimchi added Myeongtae (Theragra chalcogramma), and its complete genome sequence was determined. The complete genome of strain DMW12 includes a single circular 1,518,288-bp chromosome without plasmids. The G+C content of the genome is 35.6 mol%. Although strain DMW12 did not showed protease and lipase activities, the genome includes 33 protease- and 3 lipase-encoding genes. The genome of strain DMW12 does not include acquired antibiotic resistance genes against ampicillin, chloramphenicol, clindamycin, erythromycin, gentamicin, kanamycin, tetracycline, and streptomycin.

Keywords

Acknowledgement

This research was supported by the Dongduk Women's University grant of 2022.

References

  1. Lee JS, Lee KC, Ahn JS, Mheen TI, Pyun YR, Park YH. 2002. Weissella koreensis sp. nov., isolated from kimchi. Int. J. Syst. Evol. Microbiol. 52: 1257-1261.
  2. Kim M, Chun J. 2005. Bacterial community structure in kimchi, a Korean fermented vegetable food, as revealed by 16S rRNA gene analysis. Int. J. Food Microbiol. 103: 91-96.
  3. Song EJ, Lee ES, Park SL, Choi HJ, Roh SW, Nam YD. 2018. Bacterial community analysis in three types of the fermented seafood, jeotgal, produced in South Korea. Biosci. Biotechnol. Biochem. 82: 1444-1454.
  4. Mun SY, Chang HC. 2020. Characterization of Weissella koreensis SK isolated from kimchi fermented at low yemperature (around 0 degrees C) based on complete genome sequence and corresponding phenotype. Microorganisms 8: 1147.
  5. Yeong MS, Hee MS, Choon CH. 2020. Characterization of high-ornithine-producing Weissella koreensis DB1 isolated from kimchi and its application in rice bran fermentation as a starter culture. Foods 9: 1545.
  6. Cho J, Lee D, Yang C, Jeon J, Kim J, Han H. 2006. Microbial population dynamics of kimchi, a fermented cabbage product. FEMS Microbiol. Lett. 257: 262-267.
  7. Jeong SE, Chun BH, Kim KH, Park D, Roh SW, Lee SH, et al. 2018. Genomic and metatranscriptomic analyses of Weissella koreensis reveal its metabolic and fermentative features during kimchi fermentation. Food Microbiol. 76: 1-10.
  8. Tatusov RL, Koonin EV, Lipman DJ. 1997. A genomic perspective on protein families. Science 278: 631-637.
  9. Heo S, Kim J-H, Kwak M-S, Jeong D-W, Sung M-H. 2021. Complete genome sequence of Lactiplantibacillus plantarum KM2 from low-temperature aging beef. Korean J. Microbiol. 57: 303-306.
  10. Heo S, Kim, J-H, Kwak M-S, Sung M-H, Jeong, D-W. 2021. Functional annotation genome unravels potential probiotic Bacillus velezensis strain KMU01 from traditional korean fermented kimchi. Foods 10: 563.