Acknowledgement
This research was funded by Collect and Research Native plants on the Korean Peninsula for the Natural History exhibition of the Daegu National Science Museum (DNSM).
References
- Baldwin, B. G. 1992. Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: An example from the Compositae. Molecular Phylogenetics and Evolution 1: 3-16. https://doi.org/10.1016/1055-7903(92)90030-K
- Choi, K. S and S. Park. 2016. The complete chloroplast genome sequence of the Korean endemic plant Scrophularia takesimensis. Mitochondrial DNA Part A 27: 2058-2059 https://doi.org/10.3109/19401736.2015.1075127
- Chung, G. Y., H.-D. Jang, K. S. Chang, H. J. Choi, Y.-S. Kim, H.-J. Kim and D. C. Son. 2023. A checklist of endemic plants on the Korean Peninsula II. Korean Journal of Plant Taxonomy 53: 79-101. https://doi.org/10.11110/kjpt.2023.53.2.79
- Greiner, S., P. Lehwark and R. Bock. 2019. OrganellarGenome-DRAW (OGDRAW) version 1.3.1: Expanded toolkit for the graphical visualization of organellar genomes. Nucleic Acids Research 47: W59-W64. https://doi.org/10.1093/nar/gkz238
- Guo, L., X. Wang, R. Wang and P. Li. 2023. Characterization and comparative analysis of chloroplast genomes of medicinal herb Scrophularia ningpoensis and its common adulterants (Scrophulariaceae). International Journal of Molecular Science 24: 10034.
- Jang, H. D., T. H. Kim and B. U. Oh. 2011. A taxonomic review of Scrophularia kakudensis Franch. and its relatives. Korean Journal of Plant Taxonomy 41: 345-352. (in Korean) https://doi.org/10.11110/kjpt.2011.41.4.345
- Jang, H.-D., G.-H. Nam, M.-S. Park and J. Jun. 2021. Characterization of the complete chloroplast genome of Scrophularia cephalantha endemic to Korea. Mitochondrial DNA Part B Resources 6: 3179-3180. https://doi.org/10.1080/23802359.2021.1925986
- Jang, H.-D. and B.-U. Oh. 2013. A taxonomic study of Korean Scrophularia L. (Scrophulariaceae) based on morphological characters. Korean Journal of Plant Resources 26: 271-283. (in Korean) https://doi.org/10.7732/KJPR.2013.26.2.271
- Jin, J.-J., W.-B. Wu, J.-B. Yang, Y. Song, C. W. dePamphilis, T.-S. Yi and D.-Z. Li. 2020. GetOrganelle: A fast and versatile toolkit for accurate de novo assembly of organelle genomes. Genomic Biology 21: 241.
- Katoh, K., K. Misawa, K.-I. Kuma and T. Miyata. 2002. MAFFT: A novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Research 30: 3059-3066. https://doi.org/10.1093/nar/gkf436
- Ortega Olivencia, A. 2009. Scrophularia. In Flora Iberica, Plantaginaceae to Scrophulariaceae, Vol. 13. Benedί, C., Rico, E., Guemes, J. and Herrero, A. (eds.), Real Jardίn Botanico, CSIC, Madrid. Pp. 97-134.
- Rozas, J., A. Ferrer-Mata,J.C. Sanchez-DelBarrio, S. Guirao-Rico, P. Librado, S. E. Ramos-Onsins and A. Sanchez-Gracia. 2017. DnaSP 6: DNA sequence polymorphism analysis of large data sets. Molecular Biology and Evolution. 34: 3299-3302. https://doi.org/10.1093/molbev/msx248
- Scheunert, A. and G. Heubl. 2010. Phylogenetic relationships among New World Scrophularia L. (Scrophulariaceae): New insights inferred from DNA sequence data. Plant Systematics and Evolution 291: 69-89. https://doi.org/10.1007/s00606-010-0369-z
- Stamatakis, A. 2014. RAxML version 8: A tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30: 1312-1313. https://doi.org/10.1093/bioinformatics/btu033
- Stiefelhagen, H. 1910. Systematiche und Pflanzengeographische Studien zur Kenntnis der Gattung Scrophularia. Botanische Jahrbucher fur Systematic, Pflanzengeschichte und Pflanzengeographie 44: 406-496.
- Taberlet, P., L. Gielly, G. Pautou and J. Bouvet. 1991. Universal primers for amplification of three non-coding regions of chloroplast DNA. Plant Molecular Biology 17: 1105-1109. https://doi.org/10.1007/BF00037152
- Tillich, M., P. Lehwark, T. Pellizzer, E. S. Ulbricht-Jones, A. Fischer, R. Bock and S. Greiner. 2017. GeSeq: Versatile and accurate annotation of organelle genomes. Nucleic Acids Research 45: W6-W11. https://doi.org/10.1093/nar/gkx391
- Yamazaki, T. 1949. Scrophularia Asiae orientalis (1). The Journal of Japanese Botany 23: 79-88.
- Yi, D.-K. and K.-J. Kim. 2016. The two complete plastomes from Scrophularia (Scrophulariaceae): Scrophularia buergeriana and S. takesimensis. Mitochondrial DNA Part B Resources 1: 710-712. https://doi.org/10.1080/23802359.2016.1225528
- Wang, R., J. Gao, J. Feng, Z. Yang, Z. Qi, P. Li and C. Fu. 2022. Comparative and phylogenetic analyses of complete chloroplast genomes of Scrophularia incisa complex (Scrophulariaceae). Genes 13: 1691.
- Xu, W.-Q., J. Losh, C. Chen, P. Li, R.-H. Wang, Y.-P. Zhao, Y.-X. Qiu and C.-X. Fu. 2018. Comparative genomics of figworts (Scrophularia, Scrophulariaceae), with implications for the evolution of Scrophularia and Lamiales. Journal of Systematics and Evolution 57: 55-65.