Journal of Mushroom (한국버섯학회지)

The Korean Society of Mushroom Science (한국버섯학회)
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Eleven previously unrecorded fungal species isolated from hyphosphere soil supporting wild mushrooms in Jeju Island

제주도 야생버섯 hyphosphere 토양에서 분리된 국내 미기록 진균 11종 보고

  • Hyeongjin Noh (Department of Microbiology, Dankook University) ;
  • Ye In Kim (Department of Microbiology, Dankook University) ;
  • Dong Hyeung Lee (Department of Microbiology, Dankook University) ;
  • Pyung Yeol Ko (Sustainable Agriculture Research Institute, Jeju National University) ;
  • Hye Sung Park (Mushroom Research Division, NIHHS, RDA) ;
  • Kang-Hyo Lee (Mushroom Research Division, NIHHS, RDA) ;
  • Seong Hwan Kim (Department of Microbiology, Dankook University)
  • 노형진 (단국대학교 생명과학부 미생물학전공) ;
  • 김예인 (단국대학교 생명과학부 미생물학전공) ;
  • 이동형 (단국대학교 생명과학부 미생물학전공) ;
  • 고평열 (제주대학교 친환경농업연구소) ;
  • 박혜성 (농촌진흥청 국립원예특작과학원 인삼특작부 버섯과) ;
  • 이강효 (농촌진흥청 국립원예특작과학원 인삼특작부 버섯과) ;
  • 김성환 (단국대학교 생명과학부 미생물학전공)
  • Received : 2023.10.11
  • Accepted : 2023.12.21
  • Published : 2023.12.31
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Abstract

To understand microorganism effects on wild mushroom fruiting bodies, we investigated the fungi in hyphosphere soil supporting wild mushroom species Cortinarius violaceus, Amanita hemibapha, Laccaria vinacelavellanea, and Amanita verna found in the Gotjawal area of Jeju Island. Fungal species identification based on morphological traits and molecular analysis of ITS, LSU rDNA, and β-tubulin gene sequences resulted in isolation and identification of eleven fungal species previously unrecorded in Korea. These newly-recorded species are: Arthrinium kogelbergensis, Kalmusia longisporum, Keithomyces carneum, Neopyrenochaeta cercidis, Penicillium ranomafanaense, Phomatodes nebulosa, Pyrenochaeta nobilis, Tolypocladium album, Talaromyces kendrickii, Talaromyces qii, and Umbelopsis gibberispora, and their morphological characteristics and phylogenetic positions are described.

야생버섯의 결실에 미치는 미생물의 영향을 파악하기 위하여 제주도 곶자왈 지역에서 발견된 야생버섯, 끈적버섯 (Cortinarius violaceus), 달걀버섯 (Amanita hemibapha), 색시졸각버섯 (Laccaria vinacelavellanea), 흰알광대버섯 (Amanita verna)의 근권토양 균류를 조사하였다. 형태학적 특성 조사와 ITS, LSU rDNA, β-tubulin 유전자 서열에 대한 분자생물학적 분석을 바탕으로 동정하는 과정에서 국내 미기록 진균 11종을 분리하였다. 이들 진균은 Arthrinium kogelbergensis, Kalmusia longisporum, Keithomyces carneum, Neopyrenochaeta cercidis, Penicillium ranomafanaense, Phomatodes nebulosa, Pyrenochaeta nobilis, Tollypocladium album, Talaromyces kendrickii, Talaromyces qii, Umbelopsis gibberispora이다. 이들 11종에 진균에 대한 형태적 특성과 계통발생학적 위치를 기술하였다.

Keywords

Acknowledgement

This work was carried out with the support of "Cooperative Research Program for Agriculture Science and Technology Development(Project No. PJ015588)" Rural Development Administration and the National Institute of Biological Resources, Republic of Korea.

References

  1. Assemie A, Abaya G. 2022. The effect of edible mushroom on health and their biochemistry. Int J Microbiol 2022: 8744788.
  2. Cerar D, Malallah YM, Howard SJ, Bowyer P, Denning DW. 2009. Isolation, identification and susceptibility of Pyrenochaeta romeroi in a case of eumycetoma of the foot in the UK. Int J Antimicrob Agents 34(6): 617-618. https://doi.org/10.1016/j.ijantimicag.2009.08.004
  3. Chen Q, Jiang JR, Zhang GZ, Cai L, Crous PW. 2015. Resolving the Phoma enigma. Stud Mycol 82: 137-217. https://doi.org/10.1016/j.simyco.2015.10.003
  4. Choi MA, Park SJ, Ahn GR, Kim SH. 2014. Identification and characterization of Paraconiothyrium brasiliense from garden plant Pachysandra terminalis. Kor J Mycol 42(4): 262-268. https://doi.org/10.4489/KJM.2014.42.4.262
  5. Crous PW, Groenewald JZ. 2013. A phylogenetic reevaluation of Arthrinium. IMA Fungus 4(1): 133-154. https://doi.org/10.5598/imafungus.2013.04.01.13
  6. Gams W. 1980. Chaunopycnis alba gen. et sp. nov., a soil fungus intermediate between the Moniliales and Sphaeropsidales. Pers: Mol Phylogeny Evol Fungi 11(1): 75-79.
  7. Houbraken J, Visagie CM, Meijer M, Frisvad JC, Busby PE, Pitt JI, Seifert KA, Louis-Seize G, Demirel R, Yilmaz N, Jacobs K, Christensen M, Samson RA. 2014. A taxonomic and phylogenetic revision of Penicillium section Aspergilloides. Stud Mycol 78: 373-451. https://doi.org/10.1016/j.simyco.2014.09.002
  8. Jang YC, Lee CW. 2009. Gotjawal Forest in Jeju Island as an internationally important wetland. J Wetlands Res 11: 99-104.
  9. Jayasiri SC, Hyde KD, Jones EBG, McKenzie EHC, Jeewon R, Phillips AJL, Bhat DJ, Wanasinghe DN, Liu JK, Lu YZ, Kang JC, Xu J, Karunarathna SC. 2019. Diversity, morphology and molecular phylogeny of Dothideomycetes on decaying wild seed pods and fruits. Mycosphere 10(1): 1-186. https://doi.org/10.5943/mycosphere/10/1/1
  10. Kang JC, Kim MS. 2012. Seasonal variation in depth-stratified macroalgal assemblage patterns on Marado, Jeju Island, Korea. Algae 27(4): 269-281. https://doi.org/10.4490/algae.2012.27.4.269
  11. Kepler RM, Humber RA, Bischoff JF, Rehner SA. 2014. Clarification of generic and species boundaries for Keithomyces and related fungi through multigene phylogenetics. Mycologia 106(4): 811-829. https://doi.org/10.3852/13-319
  12. Karavani A, De Caceres M, de Aragon JM, Bonet JA, de-Miguel S. 2018. Effect of climatic and soil moisture conditions on mushroom productivity and related ecosystem services in Mediterranean pine stands facing climate change. Agric For Meteorol 248: 432-440. https://doi.org/10.1016/j.agrformet.2017.10.024
  13. Kauserud H, Stige LC, Vik JO, Okland RH, Hoiland K, Stenseth NC. 2008. Mushroom fruiting and climate change. Proc Natl Acad Sci U S A 105(10): 3811-3814. https://doi.org/10.1073/pnas.0709037105
  14. Kim CS. 2009. Vascular plant diversity of Jeju Island, Korea. Korean J Plant Res 22(6): 558-570.
  15. Kim JT, Park IH, Ryu KY, Cheon JU, Yu SH. 2003. Corky root of tomato caused by Pyrenochaeta lycopersici in Korea. Plant Pathol J 19(3): 181-183. https://doi.org/10.5423/PPJ.2003.19.3.181
  16. Ko PY. 2013. Study on species diversity of indigenous mushrooms in Jeju [dissertation]. Jeju: Jeju National University.
  17. Ko PY, Seok SJ, Lee HB, Ko HS, Jeun YC. 2014. Species diversity of spontaneous mushrooms on Jeju Island. Kor J of Mycol 42(2): 104-132. https://doi.org/10.4489/KJM.2014.42.2.104
  18. Kumar S, Stecher G, Li M, Knyaz C, Tamura K. 2018. MEGA X: Molecular Evolutionary Genetics Analysis across computing platforms. Mol Bio Evol 35(6): 1547-1549 https://doi.org/10.1093/molbev/msy096
  19. Lee SH, Ko PY, Jeun YC. 2018. Domestic unrecorded species found in the eastern part of Jeju Island. Kor J Mycol 46(2): 105-113.
  20. Li H, Tian Y, Menolli Jr N, Ye L, Karunarathna SC, Perez-Moreno J, Rahman MM, Rashid MH, Phensintham P, Rizal L, Kasuya T, Lim YW, Dutta AK, Khalid AN, Huyen LT, Balolong MP, Baruah G, Madawala S, Thongklang N, Hyde KD, Kirk PM, Xu J, Sheng J, Boa E, Mortimer PE. 2021. Reviewing the world's edible mushroom species: A new evidence-based classification system. Compr Rev Food Sci Food Saf 20(2): 1982-2014. https://doi.org/10.1111/1541-4337.12708
  21. Llanaj X, Toros G, Hajdu P, Abdalla N, El-Ramady H, Kiss A, Solberg SO, Prokisch J. 2023. Biotechnological applications of mushrooms under the water-energy-food nexus: crucial aspects and prospects from farm to pharmacy. Foods 12(14): 2671
  22. National Institute of Biological Resources. 2020. Survey and community analysis of indigenous fungi related to the growth of wild animals and plants (II). ISBN 11-1480592-001747-01.
  23. Nei M and Kumar S. 2000. Molecular Evolution and Phylogenetics. Oxford University Press, New York.
  24. Oh S-Y, Fong JJ, Park MS, Lim YW. 2016. Distinctive feature of microbial communities and bacterial functional profiles in Tricholoma matsutake dominant soil. PLoS ONE 11(12): e0168573.
  25. Oh SY, Yang JH, Woo JJ, Oh SO, Hur JS. 2020. Diversity and distribution patterns of endolichenic fungi in Jeju Island, South Korea. Sustainability 12(9): 3769.
  26. Phan CW, Sabaratnam V. 2012. Potential uses of spent mushroom substrate and its associated lignocellulosic enzymes. Appl Microbiol Biotechnol 96(4): 863-873. https://doi.org/10.1007/s00253-012-4446-9
  27. Pitt JI. 1991. Penicillium toxins. In B.R. Champ, E. Highley, A.D. Hocking, and J.I. Pitt. (ed.), Fungi and Mycotoxins in Stored Products: Proceedings of an international conference held at Bangkok, Thailand, 23-26 April 1991, ACIAR Proc.
  28. Quandt CA, Kepler RM, Gams W, Araujo JP, Ban S, Evans HC, Hughes D, Humber R, Hywel-Jones N, Li Z, Luangsa-ard J, Rehner SA, Sanjuan T, Sato H, Shrestha B, Sung GH, Yao YJ, Zare R, Spatafora JW. 2014. Phylogenetic-based nomenclatural proposals for Ophiocordycipitaceae (Hypocreales) with new combinations in Tolypocladium. IMA Fungus 5(1): 121-134. https://doi.org/10.5598/imafungus.2014.05.01.12
  29. Raaijmakers JM, Paulitz TC, Steinberg C, Alabouvette C, Moenne-Loccoz Y. 2009. The rhizosphere: a playground and battlefield for soilborne pathogens and beneficial microorganisms. Plant Soil 321: 341-361. https://doi.org/10.1007/s11104-008-9568-6
  30. Raper KB, Alexander DF, Coghill RD. 1944. Penicillin: II. Natural variation and penicillin production in Penicillium notatum and allied species 1, 2. J Bacteriol 48(6): 639-659. https://doi.org/10.1128/jb.48.6.639-659.1944
  31. Royse DJ, Baars J, Tan Q. 2017. Current overview of mushroom production in the world. In C.Z. Diego, A. Pardo-Gimenez. (e.d.), Edible and Medicinal Mushrooms: Technology and Applications, John Wiley & Sons Ltd.
  32. Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Bio Evol 4(4): 406-425.
  33. Sanchez-Garcia M, Ryberg M, Khan FK, Varga T, Nagy LG, Hibbett DS. 2020. Fruiting body form, not nutritional mode, is the major driver of diversification in mushroom-forming fungi. Proc Natl Acad Sci U S A 117(51): 32528-32534. https://doi.org/10.1073/pnas.1922539117
  34. Sangthong S, Pintathong P, Pongsua P, Jirarat A, Chaiwut P. 2022. Polysaccharides from Volvariella volvacea mushroom: Extraction, biological activities and cosmetic efficacy. J Fungi (Basel) 8(6): 572.
  35. Schneider R. 1979. The genus Pyrenochaeta De Notaris. Mitteilungen aus der Biologischen Bundesanstalt fuer Land und Forstwirtschaft. In German.
  36. Smith JJ, Lilly MD, Fox RI. 1990. The effect of agitation on the morphology and penicillin production of Penicillium chrysogenum. Biotechnol Bioeng 35(10): 1011-1023. https://doi.org/10.1002/bit.260351009
  37. Tang LQ, Hyun MW, Yun YH, Sun DY, Kim SH, Sung GH. 2012. New record of Mariannaea elegans var. elegans in Korea. Mycobiology 40(1): 14-19. https://doi.org/10.5941/MYCO.2012.40.1.014
  38. Teponno RB, Noumeur S., Helaly SE, Huttel S, Harzallah D, Stadler M. 2017. Furanones and anthranilic acid derivatives from the endophytic fungus Kalmusia variisporum. Molecules 22(10): 1674.
  39. Verkley GJM, Dukik K, Renfurm R, Goker M, Stielow JB. 2014. Novel genera and species of coniothyrium-like fungi in Montagnulaceae(Ascomycota). Persoonia 32: 25-51. https://doi.org/10.3767/003158514X679191
  40. Visagie CM, Yilmaz N, Frisvad JC, Houbraken J, Seifert KA, Samson RA, Jacobs K. 2015. Five new Talaromyces species with ampulliform-like phialides and globose rough walled conidia resembling T. verruculosus. Mycoscience 56(5): 486-502. https://doi.org/10.1016/j.myc.2015.02.005
  41. Wang QM, Zhang YH, Wang B, Wang L. 2016. Talaromyces neofusisporus and T. qii, two new species of section Talaromyces isolated from plant leaves in Tibet, China. Sci Rep 6: 18622.
  42. White TJ, Bruns TD, Lee SB, Taylor JW. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In Innis MA, Gelfand D & Sninsky JJ. (ed.), PCR Protocols: A Guide to Methods and Applications, Academic Press, USA.
  43. Yang X, Feng P, Yin Y, Bushley K, Spatafora JW, Wang C. 2018. Cyclosporine biosynthesis in Tolypocladium inflatum benefits fungal adaptation to the environment. mBio 9(5): e01211-18. https://doi.org/10.1128/mBio.01211-18
  44. Yin C, Luo F, Zhang H, Fang X, Zhu T, Li S. 2021. First report of Apiospora kogelbergensis causing blight disease of Bambusa intermedia in Sichuan Province, China. Plant Dis 105(1): 214.
  45. Yun YH, Hyun MW, Suh DY, Kim YM, Kim SH. 2009. Identification and characterization of Eurotium rubrum isolated from Meju, Korea. Mycobiology 37(4):251-257. https://doi.org/10.4489/MYCO.2009.37.4.251