DOI QR코드

DOI QR Code

Identification of WAT1-like genes in Panax ginseng and functional analysis in secondary growth

  • Hong, Jeongeui (Department of Biological Sciences and Biotechnology, Chungbuk National University) ;
  • Ryu, Hojin (Department of Biological Sciences and Biotechnology, Chungbuk National University)
  • Received : 2022.08.10
  • Accepted : 2022.09.13
  • Published : 2022.09.30

Abstract

The precise homeostatic regulation of local auxin accumulation in xylem precursors of cambium stem cell tissues is one of the most important mechanisms for plant vascular patterning and radial secondary growth. Walls are thin (WAT1), a novel intracellular auxin transporter, contributes directly to the auxin accumulation maxima in xylem precursors. According to recent research, the auxin signaling activated pathway-related gene network was significantly enriched during the secondary growth of Panax ginseng storage roots. These imply that during P. ginseng root secondary growth, specific signaling mechanisms for local auxin maxima in the vascular cambial cells are probably triggered. This study identified four WAT1-like genes, PgWAT1-1/-2 and PgWAT2-1/-2, in the P. ginseng genome. Their expression levels were greatly increased in nitratetreated storage roots stimulated for secondary root growth. PgWAT1-1 and PgWAT2-1 were similar to WAT1 from Arabidopsis and tomato plants in terms of their subcellular localization at a tonoplast and predicted transmembrane topology. We discovered that overexpression of PgWAT1-1 and PgWAT2-1 was sufficient to compensate for the secondary growth defects observed in slwat1-copi loss of function tomato mutants. This critical information from the PgWAT1-1 and PgWAT2-1 genes can potentially be used in future P. ginseng genetic engineering and breeding for increased crop yield.

Keywords

Acknowledgement

This work was supported by the the Research Program 2021 of the Korean Society of Ginseng and conducted during the research year of Chungbuk National University in 2022

References

  1. Adamowski M, Friml J (2015) PIN-dependent auxin transport: action, regulation, and evolution. The Plant Cell 27(1):20-32 https://doi.org/10.1105/tpc.114.134874
  2. Brackmann K, Qi J, Gebert M, Jouannet V, Schlamp T, Grunwald K, Wallner E-S, Novikova DD, Levitsky VG, Agusti J (2018) Spatial specificity of auxin responses coordinates wood formation. Nature communications 9(1):1-15 https://doi.org/10.1038/s41467-017-02088-w
  3. Donaldson L, Radotic K (2013) Fluorescence lifetime imaging of lignin autofluorescence in normal and compression wood. Journal of microscopy 251(2):178-187 https://doi.org/10.1111/jmi.12059
  4. Fischer U, Kucukoglu M, Helariutta Y, Bhalerao RP (2019) The dynamics of cambial stem cell activity
  5. Geem KR, Kim J, Bae W, Jee M-G, Yu J, Jang I, Lee D-Y, Hong CP, Shim D, Ryu H (2022) Nitrate enhances the secondary growth of storage roots in Panax ginseng. Journal of Ginseng Research
  6. Geldner N, Denervaud-Tendon V, Hyman DL, Mayer U, Stierhof YD, Chory J (2009) Rapid, combinatorial analysis of membrane compartments in intact plants with a multicolor marker set. The Plant Journal 59(1):169-178 https://doi.org/10.1111/j.1365-313X.2009.03851.x
  7. Hall P, Horowitz J (2013) A simple bootstrap method for constructing nonparametric confidence bands for functions. The Annals of Statistics 1892-1921
  8. Hoang NV, Choe G, Zheng Y, Fandino ACA, Sung I, Hur J, Kamran M, Park C, Kim H, Ahn H (2020) Identification of conserved gene-regulatory networks that integrate environmental sensing and growth in the root cambium. Current Biology 30(15):2887-2900. e2887 https://doi.org/10.1016/j.cub.2020.05.046
  9. Hong CP, Jang GY, Ryu H (2021a) Gibberellins enhance plant growth and ginsenoside content in Panax ginseng. Journal of Plant Biotechnology 48(3):186-192 https://doi.org/10.5010/JPB.2021.48.3.186
  10. Hong CP, Kim J, Lee J, Yoo S-i, Bae W, Geem KR, Yu J, Jang I, Jo IH, Cho H (2021b) Gibberellin signaling promotes the secondary growth of storage roots in Panax ginseng. International Journal of Molecular Sciences 22(16):8694 https://doi.org/10.3390/ijms22168694
  11. Hong J, Kim H, Ryu H (2018) Identification of ABSCISIC ACID (ABA) signaling related genes in Panax ginseng. Journal of Plant Biotechnology 45(4):306-314 https://doi.org/10.5010/JPB.2018.45.4.306
  12. Hu SY (1976) The genusPanax (ginseng) in Chinese medicine. Economic Botany 30(1):11-28 https://doi.org/10.1007/BF02866780
  13. Jang G, Lee S, Chang SH, Kim J-K, Choi YD (2018) Jasmonic acid modulates xylem development by controlling polar auxin transport in vascular tissues. Plant Biotechnology Reports 12(4): 265-271 https://doi.org/10.1007/s11816-018-0491-x
  14. Jayakodi M, Choi B-S, Lee S-C, Kim N-H, Park JY, Jang W, Lakshmanan M, Mohan SV, Lee D-Y, Yang T-J (2018) Ginseng Genome Database: an open-access platform for genomics of Panax ginseng. BMC plant biology 18(1):1-7 https://doi.org/10.1186/s12870-017-1213-1
  15. Kim NH, Jayakodi M, Lee SC, Choi BS, Jang W, Lee J, Kim HH, Waminal NE, Lakshmanan M, van Nguyen B (2018) Genome and evolution of the shade-requiring medicinal herb Panax ginseng. Plant Biotechnology Journal 16(11):1904-1917 https://doi.org/10.1111/pbi.12926
  16. Kucukoglu M, Nilsson J, Zheng B, Chaabouni S, Nilsson O (2017) WUSCHEL-RELATED HOMEOBOX 4 (WOX 4)-like genes regulate cambial cell division activity and secondary growth in Populus trees. New Phytologist 215(2):642-657 https://doi.org/10.1111/nph.14631
  17. Ku mar S, Stecher G, Tamu ra K (2016) MEGA7: molecu lar evolutionary genetics analysis version 7.0 for bigger datasets. Molecular biology and evolution 33(7):1870-1874 https://doi.org/10.1093/molbev/msw054
  18. Lee J, Han S, Lee H-Y, Jeong B, Heo T-Y, Hyun TK, Kim K, Je BI, Lee H, Shim D (2019) Brassinosteroids facilitate xylem differentiation and wood formation in tomato. Planta 249(5): 1391-1403 https://doi.org/10.1007/s00425-019-03094-6
  19. Lee J, Kim H, Park SG, Hwang H, Yoo Si, Bae W, Kim E, Kim J, Lee HY, Heo TY (2021) Brassinosteroid-BZR1/2-WAT1 module determines the high level of auxin signalling in vascular cambium during wood formation. New Phytologist 230(4):1503-1516 https://doi.org/10.1111/nph.17265
  20. Luo H, Sun C, Sun Y, Wu Q, Li Y, Song J, Niu Y, Cheng X, Xu H, Li C (2011) Analysis of the transcriptome of Panax notoginseng root uncovers putative triterpene saponin-biosynthetic genes and genetic markers. BMC genomics 12(5):1-15 https://doi.org/10.1186/1471-2164-12-1
  21. Mahady GB, Gyllenhaal C, Fong HH, Farnsworth NR (2000) Ginsengs: a review of safety and efficacy. Nutrition in clinical care 3(2):90-101 https://doi.org/10.1046/j.1523-5408.2000.00020.x
  22. Omelyanchuk N, Kovrizhnykh V, Oshchepkova E, Pasternak T, Palme K, Mironova V (2016) A detailed expression map of the PIN1 auxin transporter in Arabidopsis thaliana root. BMC plant biology 16(1):1-12 https://doi.org/10.1186/s12870-015-0700-5
  23. Ranocha P, Denance N, Vanholme R, Freydier A, Martinez Y, Hoffmann L, Kohler L, Pouzet C, Renou JP, Sundberg B (2010) Walls are thin 1 (WAT1), an Arabidopsis homolog of Medicago truncatula NODULIN21, is a tonoplast-localized protein required for secondary wall formation in fibers. The Plant Journal 63(3):469-483 https://doi.org/10.1111/j.1365-313X.2010.04256.x
  24. Ranocha P, Dima O, Nagy R, Felten J, Corratge-Faillie C, Novak O, Morreel K, Lacombe B, Martinez Y, Pfrunder S (2013) Arabidopsis WAT1 is a vacuolar auxin transport facilitator required for auxin homoeostasis. Nature communications 4(1):1-9
  25. Ruonala R, Ko D, Helariutta Y (2017) Genetic networks in plant vascular development
  26. Smetana O, Makila R, Lyu M, Amiryousefi A, Sanchez Rodriguez F, Wu M-F, Sole-Gil A, Leal Gavarron M, Siligato R, Miyashima S (2019) High levels of auxin signalling define the stem-cell organizer of the vascular cambium. Nature 565 (7740):485-489 https://doi.org/10.1038/s41586-018-0837-0
  27. Xu J, Chu Y, Liao B, Xiao S, Yin Q, Bai R, Su H, Dong L, Li X, Qian J (2017) Panax ginseng genome examination for ginsenoside biosynthesis. Gigascience 6(11):gix093