DOI QR코드

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Seven Undescribed Aspergillus Species from Different Niches in Korea

  • Monmi Pangging (Environmental Microbiology Lab, Department of Agricultural Biological Chemistry, College of Agriculture & Life Sciences, Chonnam National University) ;
  • Thuong T. T. Nguyen (Environmental Microbiology Lab, Department of Agricultural Biological Chemistry, College of Agriculture & Life Sciences, Chonnam National University) ;
  • Hyang Burm Lee (Environmental Microbiology Lab, Department of Agricultural Biological Chemistry, College of Agriculture & Life Sciences, Chonnam National University)
  • 투고 : 2021.11.22
  • 심사 : 2022.08.17
  • 발행 : 2022.08.31

초록

An investigation of species of the genus Aspergillus present in arthropod, freshwater, and soil led to the discovery of seven undescribed species in Korea. Based on their morphological characteristics and molecular phylogeny analyses using a combined data set of β-tubulin (BenA) and calmodulin (CaM) sequences, the isolated strains CNUFC IGS2-5, CNUFC YJ1-19, CNUFC WD27, CNUFC U8-70, CNUFC AS2-24, CNUFC S32-1, and CNUFC U7-48, were identified as Aspergillus brunneoviolaceus, A. capensis, A. floccosus, A. inflatus, A. parvulus, A. polyporicola, and A. spelaeus, respectively. In the present study, the detailed morphological descriptions and phylogenetic relationships of these species are provided.

키워드

과제정보

This work was supported by the Project on Survey and Discovery of Indigenous Fungal Species of Korea, funded by the NIBR [202102201], and by the Project on Discovery of Fungi from Freshwater and Collection of Fungarium, funded by the NNIBR of the Ministry of Environment [202101203]. It was also supported in part by the Basic Science Research Program through the National Research Foundation of Korea (NRF) funded by the Ministry of Education (2022R1I1A3068645).

참고문헌

  1. Micheli PA. Nova plantarum genera juxta tournefortii methodum disposita. Florence (Italy): Typis Bernardi Paperinii; 1729.
  2. Houbraken J, Kocsube S, Visagie CM, et al. Classification of Aspergillus, Penicillium, Talaromyces and related genera (Eurotiales): an overview of families, genera, subgenera, sections, series and species. Stud Mycol. 2020;95:5-169. https://doi.org/10.1016/j.simyco.2020.05.002
  3. Sklenar F, Jurjevic Z, Peterson SW, et al. Increasing the species diversity in the Aspergillus section Nidulantes: Six novel species mainly from the indoor environment. Mycologia. 2020;112(2):342-370. https://doi.org/10.1080/00275514.2019.1698923
  4. Correia ACR, Barbosa RN, Frisvad JC, et al. The polyphasic re-identification of a Brazilian Aspergillus section Terrei collection led to the discovery of two new species. Mycol Prog. 2020;19(9):885-903. https://doi.org/10.1007/s11557-020-01605-4
  5. Hyde KD, Hongsanan S, Jeewon R, et al. Fungal diversity notes 367-491: taxonomic and phylogenetic contributions to fungal taxa. Fungal Divers. 2016;80(1):1-270. https://doi.org/10.1007/s13225-016-0373-x
  6. Hong SB, Cho HS, Shin HD, et al. Novel Neosartorya species isolated from soil in Korea. Int J Syst Evol Microbiol. 2006;56(Pt 2):477-486. https://doi.org/10.1099/ijs.0.63980-0
  7. Kim HJ, Kim JS, Cheon KH, et al. Species list of Aspergillus, Penicillium and Talaromyces in Korea, based on 'one fungus one name' system. Kor J Mycol. 2016;44:207-219.
  8. Nguyen TTT, Pangging M, Bangash NK, et al. Five new records of the family Aspergillaceae in Korea, Aspergillus europaeus, A. pragensis, A. tennesseensis, Penicillium fluviserpens, and P. scabrosum. Mycobiology 2020;48(2):81-94. https://doi.org/10.1080/12298093.2020.1726563
  9. Nguyen TTT, Noh JK, Lee HB. New species and eight undescribed species belonging to the families Aspergillaceae and Trichocomaceae in Korea. Mycobiology 2021;49(6):534-550. https://doi.org/10.1080/12298093.2021.1997461
  10. Lee JW, Kim SH, You YH, et al. Four unrecorded Aspergillus species from the rhizosphere soil in South Korea. Mycobiology 2021;49(4):346-354. https://doi.org/10.1080/12298093.2021.1944461
  11. Pangging M, Nguyen TTT, Lee HB. New records of four species belonging to Eurotiales from soil and freshwater in Korea. Mycobiology 2019;47(2):154-164. https://doi.org/10.1080/12298093.2018.1554777
  12. Visagie CM, Hirooka Y, Tanney JB, et al. Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world. Stud Mycol. 2014;78:63-139. https://doi.org/10.1016/j.simyco.2014.07.002
  13. Glass NL, Donaldson GC. Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Appl Environ Microbiol. 1995;61(4):1323-1330.
  14. Hubka V, Kolarik M. β-tubulin paralogue tubC is frequently misidentified as the benA gene in Aspergillus section Nigri taxonomy: primer specificity testing and taxonomic consequences. Persoonia 2012;29:1-10. https://doi.org/10.3767/003158512X658123
  15. Peterson SW, Vega F, Posada F, et al. Penicillium coffeae, a new endophytic species isolated from a coffee plant and its phylogenetic relationship to P. fellutanum, P. thiersii and P. brocae based on parsimony analysis of multilocus DNA sequences. Mycologia 2005;97(3):659-666. https://doi.org/10.1080/15572536.2006.11832796
  16. Thompson JD, Gibson TJ, Plewniak F, et al. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 1997;25(24):4876-4882. https://doi.org/10.1093/nar/25.24.4876
  17. Hall TA. BioEdit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT. Nucleic Acids Symp Ser. 1999;41:95-98.
  18. Kumar S, Stecher G, Li M, et al. MEGA X: molecular evolutionary genetics analysis across computing platforms. Mol Biol Evol. 2018;35(6):1547-1549. https://doi.org/10.1093/molbev/msy096
  19. Batista AC, da Silva MH. Alguns aspergillales de contaminacao. Anais da Sociedade de Biologia de Pernambuco. 1955;13:91-100.
  20. Gams W, Christensen M, Onions AH, et al. Infrageneric taxa of Aspergillus. In: Samson RA, Pitt JI, editors. Advances in Penicillium and Aspergillus systematics. New York (NY): Plenum Press; 1985. p. 55-62.
  21. Serra R, Cabanes FJ, Perrone G, et al. Aspergillus ibericus: a new species of section Nigri isolated from grapes. Mycologia 2006;98(2):295-306. https://doi.org/10.1080/15572536.2006.11832702
  22. Samson RA, Visagie CM, Houbraken J, et al. Phylogeny, identification and nomenclature of the genus Aspergillus. Stud Mycol. 2014;78:141-173. https://doi.org/10.1016/j.simyco.2014.07.004
  23. Doilom M, Guo JW, Phookamsak R, et al. Screening of phosphate-solubilizing fungi from air and soil in Yunnan, China: four novel species in Aspergillus, Gongronella, Penicillium, and Talaromyces. Front Microbiol. 2020;11:585215.
  24. Crous PW, Wingfield MJ, Chooi YH, et al. Fungal planet description sheets: 1042-1111. Persoonia 2020;44:301-459. https://doi.org/10.3767/persoonia.2020.44.11
  25. Fungaro MHP, Ferranti LS, Massi FP, et al. Aspergillus labruscus sp. nov., a new species of Aspergillus section Nigri discovered in Brazil. Sci Rep. 2017;7(1):6203.
  26. Ismail MA. Incidence and significance of black aspergilli in agricultural commodities: a review, with a key to all species accepted to-date. Eur J Biol Res. 2017;7:207-222.
  27. Varga J, Frisvad JC, Kocsub e S, et al. New and revisited species in Aspergillus section Nigri. Stud Mycol. 2011;69(1):1-17.
  28. Hendrickx M, Beguin H, Detandt M. Genetic re-identification and antifungal susceptibility testing of Aspergillus section Nigri strains of the BCCM/IHEM collection. Mycoses. 2012;55(2):148-155.
  29. Jurjevi c Z, Peterson SW, Stea G, et al. Two novel species of Aspergillus section Nigri from indoor air. IMA Fungus. 2012;3(2):159-173. https://doi.org/10.5598/imafungus.2012.03.02.08
  30. Hubka V, Novakova A, Kolarik M, et al. Revision of Aspergillus section Flavipedes: seven new species and proposal of section Jani sect. nov. Mycologia. 2015;107(1):169-208. https://doi.org/10.3852/14-059
  31. Thom C, Church MB. 1926. The aspergilli. Baltimore: Williams & Wilkins. p. 272.
  32. Raper KB, Fennell DI. The genus Aspergillus. Baltimore (MD): Williams & Wilkins; 1965.
  33. Samson RA. A compilation of the aspergilli described since 1965. Stud Mycol. 1979;18:1-40.
  34. Varga J, Toth B, Kocsube S, et al. Evolutionary relationships among Aspergillus terreus isolates and their relatives. Antonie Leeuwenhoek. 2005;88(2):141-150. https://doi.org/10.1007/s10482-005-3870-6
  35. Peterson SW. Phylogenetic relationships in Aspergillus based on rDNA sequence analysis. In Samson RA, Pitt JI, editors. Integration of modern taxonomic methods for Penicillium and Aspergillus classification. Amsterdam: Harwood Academic Publishers; 2000. p. 163-178.
  36. Peterson SW. Phylogenetic analysis of Aspergillus species using DNA sequences from four loci. Mycologia 2008;100(2):205-226. https://doi.org/10.1080/15572536.2008.11832477
  37. Crognale S, Pesciaroli L, Felli M, et al. Aspergillus olivimuriae sp. nov., a halotolerant species isolated from olive brine. Int J Syst Evol Microbiol. 2019;69(9):2899-2906. https://doi.org/10.1099/ijsem.0.003575
  38. Sklenar F, Jurjevic Z, Houbraken J, et al. Re-examination of species limits in Aspergillus section Flavipedes using advanced species delimitation methods and description of four new species. Stud Mycol. 2021;99:100120.
  39. Visagie CM, Goodwell M, Nkwe DO. Aspergillus diversity from the gcwihaba cave in Botswana and description of one new species. Fungal Syst Evol. 2021;8:81-89.
  40. Wang XC, Zhuang WY. New species of Aspergillus (Aspergillaceae) from tropical islands of China. J Fungi 2022;8:225.
  41. Qin J, Lyu A, Zhang QH, et al. Strain identification and metabolites isolation of Aspergillus capensis CanS-34A from Brassica napus. Mol Biol Rep. 2019;46(3):3451-3460. https://doi.org/10.1007/s11033-019-04808-5
  42. Xiao L, Liu H, Wu N, et al. Characterization of the high cytochalasin E and rosellichalasin producing-Aspergillus sp. nov. F1 isolated from marine solar saltern in China. World J Microbiol Biotechnol. 2013;29(1):11-17. https://doi.org/10.1007/s11274-012-1152-9
  43. Hubka V, NovaKova A, Samson RA, et al. Aspergillus europaeus sp. nov., a widely distributed soil-borne species related to A. wentii (section Cremei). Plant Syst Evol. 2016;302(6):641-650. https://doi.org/10.1007/s00606-016-1293-7
  44. Rank C, Nielsen KF, Larsen TO, et al. Distribution of sterigmatocystin in filamentous fungi. Fungal Biol. 2011;115(4-5):406-420. https://doi.org/10.1016/j.funbio.2011.02.013
  45. Stolk AC, Malla DS. Penicillium inflatum sp. nov. Persoonia 1971;6:197-200.
  46. Samson RA, Peterson SW, Frisvad JC, et al. New species in Aspergillus section Terrei. Stud Mycol. 2011;69(1):39-55. https://doi.org/10.3114/sim.2011.69.04
  47. Zoran T, Sartori B, Sappl L, et al. Azole-resistance in Aspergillus terreus and related species: an emerging problem or a rare phenomenon. Front Microbiol. 2018;9:516.
  48. Chen AJ, Varga J, Frisvad JC, et al. Polyphasic taxonomy of Aspergillus section Cervini. Stud Mycol. 2016;85:65-89. https://doi.org/10.1016/j.simyco.2016.11.001
  49. Magnoli C, Dalcero AM, Chiacchiera SM, et al. Enumeration and identification of Aspergillus group and Penicillium species in poultry feeds from Argentina. Mycopathologia 1998;142(1):27-32. https://doi.org/10.1023/A:1006981523027
  50. Smith G. Some new and interesting species of micro-fungi. British Mycol Soc Trans. 1961;44:12-50.
  51. Tsyganenko KS, Zaichenko OM. Antibiotic and phytotoxic properties of some Aspergillus parvulus Smith strains. Mikrobiol Z. 2004;66(5):62-67.
  52. Tsyganenko KS, Zaichenko OM. Antibiotic properties of some species of genus Aspergillus MICH. Mikrobiolohichnyi Zhurnal. 2004;66:56-61.
  53. Chao PD, Schifff P Jr, Slatkin DJ. Metabolites of aspergilli. 4. New naphthalenones and 6-ethyl-7-methoxyjuglone from Aspergillus parvulus. J Chem Res. 1979;236.
  54. Bartman CD, Campbell IM. Naphthalenone production in Aspergillus parvulus. Can J Microbiol. 1979;25(2):130-137. https://doi.org/10.1139/m79-021
  55. Bos M, Canesso R, Inoue-Ohga N, et al. O-methylasparvenone, a nitrogen-free serotonin antagonist. Bioorg Med Chem. 1997;5(12):2165-2171. https://doi.org/10.1016/S0968-0896(97)00160-0
  56. Hubka V, Kubatova A, Mallatova N, et al. Rare and new etiological agents revealed among 178 clinical Aspergillus strains obtained from Czech patients and characterized by molecular sequencing. Med Mycol. 2012;50(6):601-610. https://doi.org/10.3109/13693786.2012.667578