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Identification of unbalanced complex chromosomal rearrangements in IVF-derived embryos during NGS analysis of preimplantation genetic testing: A case report

  • Yu, Eun Jeong (Department of Obstetrics and Gynecology, CHA Fertility Center Seoul Station, CHA University School of Medicine) ;
  • Kim, Min Jee (Laboratory of Reproductive Genetics, CHA Biotech Seoul Station) ;
  • Park, Eun A (Fertility Laboratory, CHA Fertility Center Seoul Station) ;
  • Hong, Ye Seul (Laboratory of Reproductive Genetics, CHA Biotech Seoul Station) ;
  • Park, Sun Ok (Laboratory of Reproductive Genetics, CHA Biotech Seoul Station) ;
  • Park, Sang-Hee (Genetic Laboratory, CHA Fertility Center Gangnam) ;
  • Lee, Yu Bin (Department of Obstetrics and Gynecology, CHA Fertility Center Seoul Station, CHA University School of Medicine) ;
  • Yoon, Tae Ki (Department of Obstetrics and Gynecology, CHA Fertility Center Seoul Station, CHA University School of Medicine) ;
  • Kang, Inn Soo (Department of Obstetrics and Gynecology, CHA Fertility Center Daegu, CHA University School of Medicine)
  • Received : 2021.11.16
  • Accepted : 2022.05.08
  • Published : 2022.06.30

Abstract

Complex chromosome rearrangements (CCRs) are structural chromosomal rearrangements involving at least three chromosomes and more than two breakpoints. CCR carriers are generally phenotypically normal but related to higher risk of recurrent miscarriage and having abnormal offspring with congenital anomalies. However, most of CCR carriers are not aware of their condition until genetic analysis of either abortus or affected baby or parental karyotyping is performed. Herein, we present the case that CCR carrier patients can be identified by preimplantation genetic testing of preimplantation embryos. An infertile male patient with severe oligoasthenoteratozoospermia was diagnosed balanced reciprocal translocation, 46,XY,t(3;11) (p26;p14) at first. After attempting the first preimplantation genetic testing for structural rearrangement (PGT-SR) cycle, we found the recurrent segmental gain or loss on 21q21.3-q22.3 of five out of nine embryos. As a result of karyotype re-analysis, the patient's karyotype showed a balanced CCR involving chromosomes 3, 11, and 21 with three breakpoints 3p26, 11p14, and 21q21. The patient underwent two PGT-SR cycles, and a pregnancy was established after the transfer of an euploid embryo in the second cycle. Amniocentesis confirmed that the baby carried normal karyotype without mosaicism. At 37 weeks gestation, a healthy girl weighting 3,050 g was born.

Keywords

References

  1. Madan K. Balanced complex chromosome rearrangements: reproductive aspects. A review. Am J Med Genet A 2012;158:947-63. https://doi.org/10.1002/ajmg.a.35220
  2. Pellestor F, Anahory T, Lefort G, Puechberty J, Liehr T, Hedon B, et al. Complex chromosomal rearrangements: origin and meiotic behavior. Hum Reprod Update 2011;17:476-94. https://doi.org/10.1093/humupd/dmr010
  3. Lespinasse J, North MO, Paravy C, Brunel MJ, Malzac P, Blouin JL. A balanced complex chromosomal rearrangement (BCCR) in a family with reproductive failure. Hum Reprod 2003;18:2058-66. https://doi.org/10.1093/humrep/deg424
  4. Liao Y, Wang L, Zhang D, Liu C. Identification of a balanced complex chromosomal rearrangement involving chromosomes 3, 18 and 21 with recurrent abortion: case report. Mol Cytogenet 2014;7:39. https://doi.org/10.1186/1755-8166-7-39
  5. Ngim CF, Keng WT, Ariffin R. Familial complex chromosomal rearrangement in a dysmorphic child with global developmental delay. Singapore Med J 2011;52:e206-9.
  6. Otani T, Roche M, Mizuike M, Colls P, Escudero T, Munne S. Preimplantation genetic diagnosis significantly improves the pregnancy outcome of translocation carriers with a history of recurrent miscarriage and unsuccessful pregnancies. Reprod Biomed Online 2006;13:869-74. https://doi.org/10.1016/S1472-6483(10)61037-1
  7. Fischer J, Colls P, Escudero T, Munne S. Preimplantation genetic diagnosis (PGD) improves pregnancy outcome for translocation carriers with a history of recurrent losses. Fertil Steril 2010;94:283-9. https://doi.org/10.1016/j.fertnstert.2009.02.060
  8. Garcia-Pascual CM, Navarro-Sanchez L, Navarro R, Martinez L, Jimenez J, Rodrigo L, et al. Optimized NGS approach for detection of aneuploidies and mosaicism in PGT-A and imbalances in PGT-SR. Genes (Basel) 2020;11:724. https://doi.org/10.3390/genes11070724
  9. Bartels CB, Makhijani R, Godiwala P, Bartolucci A, Nulsen JC, Grow DR, et al. In vitro fertilization outcomes after preimplantation genetic testing for chromosomal structural rearrangements comparing fluorescence in-situ hybridization, microarray comparative genomic hybridization, and next-generation sequencing. F S Rep 2020;1:249-56.
  10. Chuang TH, Wu ZH, Kuan CS, Lee MJ, Hsieh CL, Wang HL, et al. High concordance in preimplantation genetic testing for aneuploidy between automatic identification via Ion S5 and manual identification via Miseq. Sci Rep 2021;11:18931. https://doi.org/10.1038/s41598-021-98318-9
  11. Liu H, Mao B, Xu X, Liu L, Ma X, Zhang X. The effectiveness of next-generation sequencing-based preimplantation genetic testing for balanced translocation couples. Cytogenet Genome Res 2020;160:625-33. https://doi.org/10.1159/000512847
  12. Gardner DK, Lane M, Stevens J, Schlenker T, Schoolcraft WB. Blastocyst score affects implantation and pregnancy outcome: towards a single blastocyst transfer. Fertil Steril 2000;73:1155-8. https://doi.org/10.1016/S0015-0282(00)00518-5
  13. Preimplantation Genetic Diagnosis International Society (PGDIS). PGDIS position statement on chromosome mosaicism and preimplantation aneuploidy testing at the blastocyst stage. [https://www.sierr.it/comunicazioni-news-embriologia-ricerca/pgdis-position-statement. html]
  14. Kirkpatrick G, Ma S. Meiotic segregation and interchromosomal effects in a rare (1:2:10) complex chromosomal rearrangement. J Assist Reprod Genet 2012;29:77-81. https://doi.org/10.1007/s10815-011-9655-0
  15. Loup V, Bernicot I, Janssens P, Hedon B, Hamamah S, Pellestor F, et al. Combined FISH and PRINS sperm analysis of complex chromosome rearrangement t(1;19;13): an approach facilitating PGD. Mol Hum Reprod 2010;16:111-6. https://doi.org/10.1093/molehr/gap105
  16. Pellestor F, Puechberty J, Weise A, Lefort G, Anahory T, Liehr T, et al. Meiotic segregation of complex reciprocal translocations: direct analysis of the spermatozoa of a t(5;13;14) carrier. Fertil Steril 2011;95:2433.e17-22.
  17. Mardis ER. Next-generation DNA sequencing methods. Annu Rev Genomics Hum Genet 2008;9:387-402. https://doi.org/10.1146/annurev.genom.9.081307.164359
  18. Gleicher N, Vidali A, Braverman J, Kushnir VA, Barad DH, Hudson C, et al.; International PGS Consortium Study Group. Accuracy of preimplantation genetic screening (PGS) is compromised by degree of mosaicism of human embryos. Reprod Biol Endocrinol 2016;14:54. https://doi.org/10.1186/s12958-016-0193-6
  19. Lai HH, Chuang TH, Wong LK, Lee MJ, Hsieh CL, Wang HL, et al. Identification of mosaic and segmental aneuploidies by next-generation sequencing in preimplantation genetic screening can improve clinical outcomes compared to array-comparative genomic hybridization. Mol Cytogenet 2017;10:14. https://doi.org/10.1186/s13039-017-0315-7
  20. Kung A, Munne S, Bankowski B, Coates A, Wells D. Validation of next-generation sequencing for comprehensive chromosome screening of embryos. Reprod Biomed Online 2015;31:760-9. https://doi.org/10.1016/j.rbmo.2015.09.002
  21. Rubio C, Rodrigo L, Garcia-Pascual C, Peinado V, Campos-Galindo I, Garcia-Herrero S, et al. Clinical application of embryo aneuploidy testing by next-generation sequencing. Biol Reprod 2019;101:1083-90. https://doi.org/10.1093/biolre/ioz019
  22. Brunet BCFK, Shen J, Cai L, Xie J, Cui Y, Liu J, et al. Preimplantation genetic testing for complex chromosomal rearrangement carriers by next-generation sequencing. Reprod Biomed Online 2018;37:375-82. https://doi.org/10.1016/j.rbmo.2018.07.001
  23. Wang YZ, Ding CH, Wang J, Zeng YH, Zhou W, Li R, et al. Number of blastocysts biopsied as a predictive indicator to obtain at least one normal/balanced embryo following preimplantation genetic diagnosis with single nucleotide polymorphism microarray in translocation cases. J Assist Reprod Genet 2017;34:51-9. https://doi.org/10.1007/s10815-016-0831-0
  24. Li G, Shi W, Niu W, Xu J, Guo Y, Su Y, et al. The influence of balanced complex chromosomal rearrangements on preimplantation embryonic development potential and molecular karyotype. BMC Genomics 2020;21:326. https://doi.org/10.1186/s12864-020-6731-9
  25. van den Boogaard E, Hermens RP, Verhoeve HR, Kremer JA, van der Veen F, Knegt AC, et al. Selective karyotyping in recurrent miscarriage: are recommended guidelines adopted in daily clinical practice? Hum Reprod 2011;26:1965-70. https://doi.org/10.1093/humrep/der179
  26. Verlinsky Y, Tur-Kaspa I, Cieslak J, Bernal A, Morris R, Taranissi M, et al. Preimplantation testing for chromosomal disorders improves reproductive outcome of poor-prognosis patients. Reprod Biomed Online 2005;11:219-25. https://doi.org/10.1016/S1472-6483(10)60961-3