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A report of 28 unrecorded bacterial species in Korea, isolated from freshwater and sediment of the Han River watershed in 2020

  • Kim, Mirae (Department of Biological Sciences and Bioengineering, Inha University) ;
  • Song, Jaeho (Microbial Research Division, Honam National Institute of Biological Resources) ;
  • Yu, Dabin (Department of Biological Sciences and Bioengineering, Inha University) ;
  • Kim, Younghoo (Department of Biological Sciences and Bioengineering, Inha University) ;
  • Bae, Seok Hwan (Department of Biological Sciences and Bioengineering, Inha University) ;
  • Park, Miri S. (Department of Biological Sciences and Bioengineering, Inha University) ;
  • Lim, Yeonjung (Department of Biological Sciences and Bioengineering, Inha University) ;
  • Cho, Jang-Cheon (Department of Biological Sciences and Bioengineering, Inha University)
  • Received : 2021.05.04
  • Accepted : 2021.05.07
  • Published : 2021.08.31

Abstract

To obtain unrecorded freshwater bacterial species in Korea, water and sediment samples were collected from streams, lakes, and wetland of the Han River watershed in 2020. Approximately 800 bacterial strains were isolated on R2A agar after aerobic or anaerobic incubation, and identified using 16S rRNA gene sequences. A total of 28 strains, with ≥98.7% 16S rRNA gene sequence similarity with validly published bacterial species but not reported in Korea, were determined to be unrecorded bacterial species in Korea. The unrecorded bacterial strains were phylogenetically diverse and belonged to four phyla, eight classes, 13 orders, 19 families, and 25 genera. The unreported species were assigned to Acetobacter, Alsobacter, Mesorhizobium, Prosthecomicrobium, and Microvirga of the class Alphaproteobacteria; Vogesella, Formosimonas, Aquincola, Massilia, Acidovorax, and Brachymonas of the class Betaproteobacteria; Pseudoxanthomonas, Thermomonas, Lysobacter, Enterobacter, Kosakonia, and Acinetobacter of the class Gammaproteobacteria; Sulfuricurvum of the class Epsilonproteobacteria; Mycolicibacterium, Agromyces, Phycicoccus, and Microbacterium of the class Actinobacteria; Paenibacillus of the class Bacilli; Clostridium of the class Clostridia; and Flavobacterium of the class Flavobacteriia. The details of the unreported species, including Gram reaction, colony and cell morphology, biochemical characteristics, and phylogenetic position are also provided in the description of the strains.

Keywords

Acknowledgement

This study was supported by the research grant "Survey of freshwater organisms and specimen collection (Prokaryotes)" from Nakdonggang National Institute of Biological Resources of the Ministry of Environment in Korea.

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