Acknowledgement
This study was supported by a grant from the Nakdong-gang National Institute of Biological Resources(NNIBR), funded by the Ministry of Environment(MOE) of the Republic of Korea (NNIBR202101105).
References
- Felsenstein, J. 1981. Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Nol. Evol. 17:368-376. https://doi.org/10.1007/BF01734359
- Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791. https://doi.org/10.1111/j.1558-5646.1985.tb00420.x
- Fitch, W.M. 1971. Toward defining the course of evolution: minimum change for a specific tree topology. Syst. Zool. 20:406-416. https://doi.org/10.2307/2412116
- Glockner, F.O., E. Zaichikov, N. Belkova, L. Denissova, J. Pernthaler, A. Pernthaler and R. Amann. 2000. Comparative 16S rRNA analysis of lake bacterioplankton reveals globally distributed phylogenetic clusters including an abundant group of actinobacteria. Appl. Environ. Microbiol. 66:5053-5065. https://doi.org/10.1128/AEM.66.11.5053-5065.2000
- Kim, K. 2018. Microbial Diversity Analysis of Sediment from Nakdong River Estuary in the Republic of Korea Using 16S rRNA Gene Amplicon Sequencing. Microbiology Resource Announcements 7(14): e01186-18.
- Kim, T., H. Kim and G. Kim. 2020. Tracing river water versus wastewater sources of trace elements using rare earth elements in the Nakdong River estuarine waters. Mar. Pollut. Bull. 160:111589. https://doi.org/10.1016/j.marpolbul.2020.111589
- Kumar, S., G. Stecher and K. Tamura. 2016. MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol. Biol. Evol. 33:1870-1874. https://doi.org/10.1093/molbev/msw054
- Lee, J.H., H.J. Woo, K.S. Jeong, J.W. Kang, J.U. Choi, E.J. Jeong, K.S. Park and D.H. Lee. 2017. Spatial distribution of polycyclic aromatic hydrocarbon and polychlorinated biphenyl sources in the Nakdong River Estuary, South Korea. J. Environ. Sci. Health A Tox. Hazard Subst. Environ. Eng. 52(12):1173-1183. https://doi.org/10.1080/10934529.2017.1356207
- Newton, R.J., S.E. Jones, A. Eiler, K.D. Mcmahon and S. Bertilsson. 2011. A guide to the natural history of freshwater lake bacteria. Microbiology and Molecular Biology Reviews 75:14-49 https://doi.org/10.1128/MMBR.00028-10
- Oh, S.M., H.R. Kim, H.K. Park, K. Choi, J. Ryu, H.S. Shin, J.S. Park, J.S. Lee and K.H. Chung. 2009. Identification of estrogen-like effects and biologically active compounds in river water using bioassays and chemical analysis. Science of the Total Environment, 407(21):5787-5794. https://doi.org/10.1016/j.scitotenv.2009.06.010
- Saitou, N. and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
- Tekile, A., I. Kim and J.J. Kim. 2015. Mini-review on river eutrophication and bottom improvement techniques, with special emphasis on the Nakdong River. Environ. Sci. (China). 30:113-121. https://doi.org/10.1016/j.jes.2014.10.014
- Weisburg, W.G., S.M. Barns, D.A. Pelletier and D.J. Lane. 1991. 16S ribosomal DNA amplification for phylogenetic study. J. Bacteriol. 173:697-703. https://doi.org/10.1128/jb.173.2.697-703.1991
- Yoon, S.H., S.M. Ha, S. Kwon, J. Lim, Y. Kim, H. Seo and J. Chun. 2017. Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies. Int. J. Syst. Evol. Microbiol. 67:1613-1617. https://doi.org/10.1099/ijsem.0.001755