Acknowledgement
This work was supported by a grant from the Korea Health Industry Development Institute (KHIDI) (HI21C0561) and a grant from the National Research Foundation of Korea (2017M3C9A6047615). We thank KREONET (Korea Research Environment Open NETwork) and KISTI (Korea Institute of Science and Technology Information) for allowing us to use their network infrastructure.
References
- Tauxe RV, Doyle MP, Kuchenmuller T, Schlundt J, Stein CE. Evolving public health approaches to the global challenge of foodborne infections. Int J Food Microbiol 2010;139 Suppl 1:S16-28. https://doi.org/10.1016/j.ijfoodmicro.2009.10.014
- Kokkinos PA, Ziros PG, Bellou M, Vantarakis A. Loop-mediated isothermal amplification (LAMP) for the detection of Salmonella in food. Food Anal Methods 2014;7:512-526. https://doi.org/10.1007/s12161-013-9748-8
- Scallan E, Hoekstra RM, Angulo FJ, Tauxe RV, Widdowson MA, Roy SL, et al. Foodborne illness acquired in the United States: major pathogens. Emerg Infect Dis 2011;17:7-15. https://doi.org/10.3201/eid1701.09-1101p1
- Besser JM. Salmonella epidemiology: a whirlwind of change. Food Microbiol 2018;71:55-59. https://doi.org/10.1016/j.fm.2017.08.018
- Zhuang L, Gong J, Li Q, Zhu C, Yu Y, Dou X, et al. Detection of Salmonella spp. by a loop-mediated isothermal amplification (LAMP) method targeting bcf D gene. Lett Appl Microbiol 2014;59:658-664. https://doi.org/10.1111/lam.12328
- Heymans R, Vila A, van Heerwaarden CA, Jansen CC, Castelijn GA, van der Voort M, et al. Rapid detection and differentiation of Salmonella species, Salmonella Typhimurium and Salmonella Enteritidis by multiplex quantitative PCR . PLoS One 2018;13:e0206316. https://doi.org/10.1371/journal.pone.0206316
- Chen G, Chen R, Ding S, Li M, Wang J, Zou J, et al. Recombinase assisted loop-mediated isothermal DNA amplification. Analyst 2020;145:440-444. https://doi.org/10.1039/c9an01701a
- Nzelu CO, Kato H, Peters NC. Loop-mediated isothermal amplification (LAMP): an advanced molecular point-of-care technique for the detection of Leishmania infection. PLoS Negl Trop Dis 2019;13:e0007698. https://doi.org/10.1371/journal.pntd.0007698
- Luppa PB, Muller C, Schlichtiger A, Schlebusch H. Point-of-care testing (POCT): current techniques and future perspectives. Trends Analyt Chem 2011;30:887-898. https://doi.org/10.1016/j.trac.2011.01.019
- Niemz A, Ferguson TM, Boyle DS. Point-of-care nucleic acid testing for infectious diseases. Trends Biotechnol 2011;29:240-250. https://doi.org/10.1016/j.tibtech.2011.01.007
- Notomi T, Okayama H, Masubuchi H, Yonekawa T, Watanabe K, Amino N, et al. Loop-mediated isothermal amplification of DNA. Nucleic Acids Res 2000;28:E63. https://doi.org/10.1093/nar/28.12.e63
- Srividya A, Maiti B, Chakraborty A, Chakraborty G. Loop mediated isothermal amplification: a promising tool for screening genetic mutations. Mol Diagn Ther 2019;23:723-733. https://doi.org/10.1007/s40291-019-00422-0
- Zhao Y, Chen F, Li Q, Wang L, Fan C. Isothermal amplification of nucleic acids. Chem Rev 2015;115:12491-12545. https://doi.org/10.1021/acs.chemrev.5b00428
- Kashir J, Yaqinuddin A. Loop mediated isothermal amplification (LAMP) assays as a rapid diagnostic for COVID-19. Med Hypotheses 2020;141:109786. https://doi.org/10.1016/j.mehy.2020.109786
- Yang Q, Domesle KJ, Ge B. Loop-mediated isothermal amplification for Salmonella detection in food and feed: current applications and future directions. Foodborne Pathog Dis 2018;15:309-331. https://doi.org/10.1089/fpd.2018.2445
- Hara-Kudo Y, Yoshino M, Kojima T, Ikedo M. Loop-mediated isothermal amplification for the rapid detection of Salmonella. FEMS Microbiol Lett 2005;253:155-161. https://doi.org/10.1016/j.femsle.2005.09.032
- Zhang S, Shin J, Shin S, Chung YJ. Development of reverse transcription loop-mediated isothermal amplification assays for point-of-care testing of avian influenza virus subtype H5 and H9. Genomics Inform 2020;18:e40. https://doi.org/10.5808/GI.2020.18.4.e40
- Fahlen TF, Mathur N, Jones BD. Identification and characterization of mutants with increased expression of hilA, the invasion gene transcriptional activator of Salmonella typhimurium. FEMS Immunol Med Microbiol 2000;28:25-35. https://doi.org/10.1016/S0928-8244(99)00199-6
- Schechter LM, Lee CA. AraC/XylS family members, HilC and HilD, directly bind and derepress the Salmonella typhimurium hilA promoter. Mol Microbiol 2001;40:1289-1299. https://doi.org/10.1046/j.1365-2958.2001.02462.x
- Bajaj V, Hwang C, Lee CA. hilA is a novel ompR/toxR family member that activates the expression of Salmonella Typhimurium invasion genes. Mol Microbiol 1995;18:715-727. https://doi.org/10.1111/j.1365-2958.1995.mmi_18040715.x
- Pathmanathan SG, Cardona-Castro N, Sanchez-Jimenez MM, Correa-Ochoa MM, Puthucheary SD, Thong KL. Simple and rapid detection of Salmonella strains by direct PCR amplification of the hilA gene. J Med Microbiol 2003;52:773-776. https://doi.org/10.1099/jmm.0.05188-0