DOI QR코드

DOI QR Code

COI-Based Genetic Structure of an Exotic Snapping Turtle Chelydra serpentina Imported to South Korea

  • Baek, Su Youn (Department of Biology Education, Teachers College & Institute for Phylogenomics and Evolution, Kyungpook National University) ;
  • Shin, ChoRong (School of Life Science, Graduate School, Kyungpook National University) ;
  • Kim, Kyung Min (School of Life Science, Graduate School, Kyungpook National University) ;
  • Choi, Eun-Hwa (Department of Biology Education, Teachers College & Institute for Phylogenomics and Evolution, Kyungpook National University) ;
  • Hwang, Jihye (Department of Biology Education, Teachers College & Institute for Phylogenomics and Evolution, Kyungpook National University) ;
  • Jun, Jumin (Division of Animal Resources, National Institute of Biological Resources) ;
  • Park, Taeseo (Division of Animal Resources, National Institute of Biological Resources) ;
  • Kil, Hyun Jong (Division of Animal Resources, National Institute of Biological Resources) ;
  • Suk, Ho Young (Department of Life Sciences, Yeungnam University) ;
  • Min, Mi-Sook (Research Institute for Veterinary Science, College of Veterinary Medicine, Seoul National University) ;
  • Park, Yoonseong (Department of Entomology, Kansas State University) ;
  • Lee, YoungSup (School of Life Science, Graduate School, Kyungpook National University) ;
  • Hwang, Ui Wook (Department of Biology Education, Teachers College & Institute for Phylogenomics and Evolution, Kyungpook National University)
  • 투고 : 2020.06.17
  • 심사 : 2020.10.07
  • 발행 : 2020.10.31

초록

A common snapping turtle Chelydra serpentina inhabiting North America is internationally protected as an endangered species. It is known that the individuals of common snapping turtles were imported to South Korea as pets, and after being abandoned, some inhabit the natural ecosystem of South Korea like wild animals. No genetic survey has yet been performed for the common snapping turtles imported to South Korea. Hereby, cytochrome c oxidase subunit I (COI) information, which is 594 bp long, was determined for a total of 16 C. serpentina individuals, of which one was found in nature, twelve legally imported and their descendants, and the other three were provided from the Kansas Herpetological Society, USA. The obtained data were combined with thirteen COI sequences of C. serpentina retrieved from NCBI GenBank for the subsequent population genetic analyses. The results showed that there exist five haplotypes with high sequence similarity (only three parsimoniously informative sites). In the TCS and phylogenetic analyses, all the examined C. serpentina samples coincidently formed a strong monoclade with those collected mostly from Kansas State, USA, indicating that the imported ones to South Korea are from the central North America. In addition, there found the amino acid changes and the high degree of nucleotide sequence differences between C. serpentina and C. rossignoni with some important morphological characters. It is expected that the present results could provide an important framework for systematic management and control of exotic snapping turtles imported and released to nature of South Korea.

키워드

과제정보

We thank to Dr. Curtis J. Schmidt, Fort Hays State University for providing the tissue samples of C. serpentina by the Kansas Herpetological Society, United States. This study was supported by the grant No. NIBR201905202 to UWH funded by the National Institute of Biological Resources(NIBR), Ministry of Environment, South Korea.

참고문헌

  1. Chamber EA, Herbert PDN, 2016. Assessing DNA barcodes for species identification in North American reptiles and amphibians in natural history collections. PLoS One, 11:e0154363. https://doi.org/10.1371/journal.pone.0154363
  2. Ceballos CP, Fitzgerald LA, 2004. The trade in native and exotic turtles in Texas. Wildlife Society Bulletin, 32:881-892. https://doi.org/10.2193/0091-7648(2004)032[0881:TTINAE]2.0.CO;2
  3. Colteaux BC, Johnson DM, 2017. Commercial harvest and export of snapping turtles (Chelydra serpentina) in the United States: trends and the efficacy of size limits at reducing harvest. Journal for Nature Conservation, 35:13-19. https://doi.org/10.1016/j.jnc.2016.11.003
  4. Ernst CH, Barbour RW, 1989. Turtles of the world. Smithsonian Institution Press, Washington, Washington, DC, pp. 1-313.
  5. Ernst CH, Lovich JE, 2009. Turtles of the United States and Canada. 2nd ed. Johns Hopkins University Press, Baltimore, MD, pp. 1-827.
  6. Ernst CH, Lovich JE, Barbour RB, 1994. Turtles of the United States and Canada. Smithsonian Institution Press, Washington, DC, pp. 1-682.
  7. Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R, 1994. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology and Biotechnology, 3:294-299.
  8. Gibbons JW, Lovich JE, 1990. Sexual dimorphism in turtles with emphasis on the slider turtle (Trachemys scripta). Herpetological Monographs, 4:1-29. https://doi.org/10.2307/1466966
  9. Hall TA, 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series, 41:95-98.
  10. Hammer DA, 1972. Ecological relations of waterfowl and snapping turtle populations. Ph.D. dissertation, Utah State University, Salt Lake City, UT, pp. 1-72.
  11. Honda M, Yasukawa Y, Ota H, 2002. Phylogeny of the Eurasian freshwater turtles of the genus Mauremys Gray 1869 (Testudines), with special reference to a close affinity of Mauremys japonica with Chinemys reevesii. Journal of Zoological Systematics and Evolutionary Research, 40:195-200. https://doi.org/10.1046/j.1439-0469.2002.00176.x
  12. IUCN, 2012. IUCN Red List of Threatened Species [Internet]. International Union for Conservation of Nature and Natural Resources, Gland, Accessed 4 Dec 2019, .
  13. Kato H, Etoh H, 2012. Naturalization of the snapping turtle, Chelydra serpentina (Testudines, Chelidridae) in the Kano Basin, Shizuoka Prefecture, Japan. Natural History of the Tokai District, 5:41-44.
  14. Kobayashi R, 2000. Note on Chelydra serpentina from northwestern Chiba Prefecture. Bulletin of the Chemical Society of Japan, 2000:58-59.
  15. Kobayashi R, Hasegawa M, Miyashita T, 2006. Home range and habitat use of the exotic turtle Chelydra serpentina in the Inbanuma Basin, Chiba Prefecture, central Japan. Current Herpetology, 25:47-55. https://doi.org/10.3105/1345-5834 (2006)25[47:HRAHUO]2.0.CO;2
  16. Kumar S, Stecher G, Tamura K, 2016. MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger datasets. Molecular Biology and Evolution, 33:1870-1874. https://doi.org/10.1093/molbev/msw054
  17. Legler JM, Vogt RC, 2013. The turtles of Mexico: land and freshwater forms. University of California Press, Berkeley, CA, pp. 1-416.
  18. Leigh JW, Bryant D, 2015. PopART: full-feature software for haplotype network construction. Methods in Ecology and Evolution, 6:1110-1116. https://doi.org/10.1111/2041-210X.12410
  19. Librado P, Rozas J, 2005. DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics, 25:1451-1452. https://doi.org/10.1093/bioinformatics/btp187
  20. Nei M, 1987. Molecular evolutionary genetics. Columbia University Press, New York, pp. 1-512.
  21. Reid BN, Le M, McCord WP, Iverson JB, Georges A, Bergmann T, Amato G, Desalle R, Naro-Maciel E, 2011. Comparing and combining distance-based and character-based approaches for barcoding turtles. Molecular Ecology Resources, 11:956-967. http://doi.org/10.1111/j.1755-0998.2011.03032.x
  22. Rhodin AGJ, Van Dijk PP, Iverson JB, Shaffer HB, 2010. Turtles of the world, 2010 update: annotated checklist of taxonomy, synonymy, distribution, and conservation status. Chelonian Research Monographs, 5:000.85-000.164. https://doi.org/10.3854/crm.5.000.checklist.v3.2010
  23. Schlaepfer MA, Hoover C, Dodd CK, 2005. Challenges in evaluating the impact of the trade in amphibians and reptiles on wild populations. Bioscience, 55:256-264. https://doi.org/10.1641/0006-3568 (2005)055[0256:CIETIO]2.0.CO;2
  24. Shaffer HB, Starkey DE, Fujita MK, 2008. Molecular insights into the systematics of the snapping turtles(Chelydridae). In: Biology of the snapping turtle (Chelydra serpentina) (Eds., Brooks RJ, Steyermark AC, Finkler MS). Johns Hopkins University Press, Baltimore, MD, pp. 44-49.
  25. Thompson JD, Gibson TJ, Plewniak F, Jeanmouogin F, Higgins DG, 1997. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research, 25:4876-4882. https://doi.org/10.1093/nar/25.24.4876