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사람 수술후상악낭종 병소에서 분리한 Parvimonas micra KCOM 1037의 유전체 염기서열 완전 해독

Complete genome sequence of Parvimonas micra KCOM 1037 isolated from human postoperative maxillary cyst lesion

  • 박순낭 (조선대학교 치과대학 구강생화학교실 및 한국구강미생물자원은행) ;
  • 임윤경 (조선대학교 치과대학 구강생화학교실 및 한국구강미생물자원은행) ;
  • 신자영 (마크로젠) ;
  • 노한성 (마크로젠) ;
  • 임관주 (조선대학교 치의학전문대학원) ;
  • 국중기 (조선대학교 치과대학 구강생화학교실 및 한국구강미생물자원은행)
  • Park, Soon-Nang (Korean Collection for Oral Microbiology and Department of Oral Biochemistry, College of Dentistry, Chosun University) ;
  • Lim, Yun Kyong (Korean Collection for Oral Microbiology and Department of Oral Biochemistry, College of Dentistry, Chosun University) ;
  • Shin, Ja Young (Macrogen Inc.) ;
  • Roh, Hanseong (Macrogen Inc.) ;
  • Lim, Kwanju (School of Dentistry, Chosun University) ;
  • Kook, Joong-Ki (Korean Collection for Oral Microbiology and Department of Oral Biochemistry, College of Dentistry, Chosun University)
  • 투고 : 2018.12.24
  • 심사 : 2019.01.16
  • 발행 : 2019.06.30

초록

Parvimonas micra는 그람 양성, 절대 혐기성, 비운동성 및 아포를 생성하지 않는 구균이다. 이 세균 종은 구강의 정상 세균 총 하나이며, 구강 감염성질환 및 전신질환고도 연관이 있다. P. micra KCOM 1037 (= ChDC B276) 균주가 수술후상악낭종 병소에서 분리되었다. 여기에서 P. micra KCOM 1037 균주의 유전체 염기서열을 완전 해독하여 보고한다.

Parvimonas micra is Gram-positive, strict anaerobic, non-motile, and non-spore forming coccus. It is a member of oral flora and is related to oral infectious diseases as well as systemic diseases. P. micra KCOM 1037 (= ChDC B276) was isolated from human postoperative maxillary cyst lesion. Here, we present the complete genome sequence of P. micra KCOM 1037.

키워드

Table 1. Genome features of Parvimonas micra KCOM 1037

MSMHBQ_2019_v55n2_149_t0001.png 이미지

참고문헌

  1. Bartz H, Nonnenmacher CB, Bollmann C, Kuhl M, Zimmermann S, Heeg K, and Mutters R. 2005. Micromonas (Peptostreptococcus) micros: unusual case of prosthetic joint infection associated with dental procedures. Int. J. Med. Microbiol. 294, 465-470. https://doi.org/10.1016/j.ijmm.2004.10.001
  2. Cho E, Park SN, Lim YK, Shin Y, Paek J, Hwang CH, Chang YH, and Kook JK. 2015. Fusobacterium hwasookii sp. nov., isolated from a human periodontitis lesion. Curr. Microbiol. 70, 169-175. https://doi.org/10.1007/s00284-014-0692-7
  3. Civen R, Jousimies-Somer H, Marina M, Borenstein L, Shah H, and Finegold SM. 1995. A retrospective review of cases of anaerobic empyema and update of bacteriology. Clin. Infect. Dis. 20, S224-S229. https://doi.org/10.1093/clinids/20.Supplement_2.S224
  4. de Sousa EL, Ferraz CC, Gomes BP, Pinheiro ET, Teixeira FB, and de Souza-Filho FJ. 2003. Bacteriological study of root canals associated with periapical abscesses. Oral Surg. Oral Med. Oral Pathol. Oral Radiol. Endod. 96, 332-339. https://doi.org/10.1016/S1079-2104(03)00261-0
  5. Endo S, Nemoto T, Yano H, Kakuta R, Kanamori H, Inomata S, Ishibashi N, Aoyagi T, Hatta M, Gu Y, et al. 2015. First confirmed case of spondylodiscitis with epidural abscess caused by Parvimonas micra. J. Infect. Chemother. 21, 828-830. https://doi.org/10.1016/j.jiac.2015.06.002
  6. Gomez CA, Gerber DA, Zambrano E, Banaei N, Deresinski S, and Blackburn BG. 2015. First case of infectious endocarditis caused by Parvimonas micra. Anaerobe 36, 53-55. https://doi.org/10.1016/j.anaerobe.2015.10.007
  7. Haffajee AD and Socransky SS. 1994. Microbial etiological agents of destructive periodontal diseases. Periodontology 2000 5, 78-111. https://doi.org/10.1111/j.1600-0757.1994.tb00020.x
  8. Murdoch DA, Mitchelmore IJ, and Tabaqchali S. 1988. Peptostreptococcus micros in polymicrobial abscesses. Lancet 1, 594.
  9. Murdoch DA and Shah HN. 1999. Reclassification of Peptostrep tococcus magnus (Prevot 1933) Holdeman and Moore 1972 as Finegoldia magna comb. nov. and Peptostreptococcus micros 2712 International Journal of Systematic and Evolutionary Microbiology 56 B. J. Tindall and J. P. Euze by (Prevot 1933) Smith 1957 as Micromonas micros comb. nov. Anaerobe 5, 555-559. https://doi.org/10.1006/anae.1999.0197
  10. Park SN and Kook JK. 2013. Development of Streptococcus gordoniispecific quantitative real-time polymerase chain reaction primers based on the nucleotide sequence of rpoB. Microbiol. Immunol. 57, 583-588. https://doi.org/10.1111/1348-0421.12063
  11. Tatusova T, DiCuccio M, Badretdin A, Chetvernin V, Nawrocki EP, Zaslavsky L, Lomsadze A, Pruitt KD, Borodovsky M, and Ostell J. 2016. NCBI prokaryotic genome annotation pipeline. Nucleic Acids Res. 44, 6614-6624. https://doi.org/10.1093/nar/gkw569
  12. Tindall B and Euzeby J. 2006. Proposal of Parvimonas gen. nov. and Quatrionicoccus gen. nov. as replacements for the illegitimate, prokaryotic, generic names Micromonas Murdoch and Shah 2000 and Quadricoccus Maszenan et al. 2002, respectively. Int. J. Syst. Evol. Microbiol. 56, 2711-2713. https://doi.org/10.1099/ijs.0.64338-0
  13. Walker BJ, Abeel T, Shea T, Priest M, Abouelliel A, Sakthikumar S, Cuomo CA, Zeng Q, Wortman J, Young SK, et al. 2014. Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement. PLoS One 9, e112963. https://doi.org/10.1371/journal.pone.0112963