DOI QR코드

DOI QR Code

Factors affecting the urease activity of native ureolytic bacteria isolated from coastal areas

  • 투고 : 2018.10.11
  • 심사 : 2019.02.05
  • 발행 : 2019.04.10

초록

Coastal erosion is becoming a significant problem in Greece, Bangladesh, and globally. For the prevention and minimization of damage from coastal erosion, combinations of various structures have been used conventionally. However, most of these methods are expensive. Therefore, creating artificial beachrock using local ureolytic bacteria and the MICP (Microbially Induced Carbonate Precipitation) method can be an alternative for coastal erosion protection, as it is a sustainable and eco-friendly biological ground improvement technique. Most research on MICP has been confined to land ureolytic bacteria and limited attention has been paid to coastal ureolytic bacteria for the measurement of urease activity. Subsequently, their various environmental effects have not been investigated. Therefore, for the successful application of MICP to coastal erosion protection, the type of bacteria, bacterial cell concentration, reaction temperature, cell culture duration, carbonate precipitation trend, pH of the media that controls the activity of the urease enzyme, etc., are evaluated. In this study, the effects of temperature, pH, and culture duration, as well as the trend in carbonate precipitation of coastal ureolytic bacteria isolated from two coastal regions in Greece and Bangladesh, were evaluated. The results showed that urease activity of coastal ureolytic bacteria species relies on some environmental parameters that are very important for successful sand solidification. In future, we aim to apply these findings towards the creation of artificial beachrock in combination with a geotextile tube for coastal erosion protection in Mediterranean countries, Bangladesh, and globally, for bio-mediated soil improvement.

키워드

과제정보

연구 과제 주관 기관 : JSPS KAKENHI

참고문헌

  1. Al-Thawadi, S. and Cord-Ruwisch, R. (2012), "Calcium carbonate crystals formation by ureolytic bacteria isolated from Australian soil and sludge", J. Adv. Sci. Eng. Res., 2(1), 12-26.
  2. Amarakoon, G.G.N.N. and Kawasaki, S. (2017), "Factors affecting sand solidification using MICP with pararhodobacter sp", Mater. Trans., 59(1), 72-81. https://doi.org/10.2320/matertrans.M-M2017849
  3. Chang, M., Mao, T. and Huang, R. (2016), "A study on the improvements of geotechnical properties of in situ soils by grouting", Geomech. Eng., 10(4), 527-546. https://doi.org/10.12989/gae.2016.10.4.527
  4. Danjo, T. and Kawasaki, S. (2014a), "Formation mechanisms of beachrocks in Okinawa and Ishikawa, Japan, with a focus on cements", Mater. Trans., 55(3), 493-500. https://doi.org/10.2320/matertrans.M-M2013844
  5. Danjo, T. and Kawasaki, S. (2014b), "Characteristics of beachrocks: A review", Geotech. Geol. Eng., 32(2), 215-246. https://doi.org/10.1007/s10706-013-9712-9
  6. Danjo, T. and Kawasaki, S. (2016), "Microbially induced sand cementation method using pararhodobacter sp. Strain SO1, inspired by beachrock formation mechanism", Mater. Trans., 57(3), 428-437. https://doi.org/10.2320/matertrans.M-M2015842
  7. Dhami, N.K., Reddy, M.S. and Mukherjee, M.S. (2013), "Biomineralization of calcium carbonates and their engineered applications: A review", Front. Microbiol., 4(314), 1-13.
  8. Ferris, F.G., Phoenix, V., Fujita, Y. and Smith, R.W. (2004), "Kinetics of calcite precipitation induced by ureolytic bacteria at 10 to 20C in artificial groundwater", Geochim. Cosmochim. Acta, 68(8), 1701-1710. https://doi.org/10.1016/S0016-7037(03)00503-9
  9. Fujita, M., Nakashima, K., Achal, V. and Kawasaki, S. (2017), "Whole-cell evaluation of urease activity of Pararhodobacter sp. isolated from peripheral beachrock", Biochem. Eng. J., 124, 1-5. https://doi.org/10.1016/j.bej.2017.04.004
  10. Fukue, M., Ono, S., Sato Yoshio, S.I. (2011), "Growth of carbonate particles by urease-producing microorganisms", Geotech. J., 6(3), 455-464. https://doi.org/10.3208/jgs.6.455
  11. Harkes, M.P., van Paassen, L.A., Booster, J.L., Whiffin, V.S. and van Loosdrecht, M.C.M. (2010), "Fixation and distribution of bacterial activity in sand to induce carbonate precipitation for ground reinforcement", Ecol. Eng., 36(2), 112-117. https://doi.org/10.1016/j.ecoleng.2009.01.004
  12. Helmi, F.M., Elmitwalli, H.R., Elnagdy, S.M. and El-Hagrassy, A.F. (2016), "Calcium carbonate precipitation induced by ureolytic bacteria Bacillus licheniformis", Ecol. Eng., 90, 367-371. https://doi.org/10.1016/j.ecoleng.2016.01.044
  13. Imran, A., Nakashima, K. and Kawasaki, S. (2017), "Combination technology of geotextile tube and artificial beachrock for coastal protection", Int. J. GEOMATE, 13(39), 67-72.
  14. Kaur, N., Reddy, M.S. and Mukherjee, A. (2013), "Biomineralization of calcium carbonate polymorphs by the bacterial strains isolated from calcareous sites", J. Microbiol. Biotechnol., 23(5), 707-714. https://doi.org/10.4014/jmb.1212.11087
  15. Keykha, H.A., Asadi, A. and Zareian, M. (2017a), "Environmental factors affecting the compressive strength of microbiologically induced calcite precipitation treated soil", Geomicrobiol. J., 34(10), 889-894. https://doi.org/10.1080/01490451.2017.1291772
  16. Kim, D. and Park, K. (2017), "Evaluation of the grouting in the sandy ground using bio injection material", Geomech. Eng., 12(5), 739-752. https://doi.org/10.12989/gae.2017.12.5.739
  17. Lauchnor, E.G., Topp, D.M., Parker, A.E. and Gerlach, R. (2015), "Whole cell kinetics of ureolysis by Sporosarcina pasteurii", J. Appl. Microbiol., 118(6), 1321-1332. https://doi.org/10.1111/jam.12804
  18. Mujah, D., Shahin, M. and Cheng, L. (2016), "Performance of biocemented sand under various environmental conditions", Proceedings of the 18th Brazilian Conference on Soil Mechanics and Geotechnical Engineering, Minascentro, Brazil, October.
  19. Natarajan, K.R. (1995), "Kinetic study of the enzyme urease from dolichos biflorus", J. Chem. Edu., 72(6), 556-557. https://doi.org/10.1021/ed072p556
  20. Okwadha, G.D.O. and Li, J. (2010), "Optimum conditions for microbial carbonate precipitation", Chemosphere, 81(9), 1143-1148. https://doi.org/10.1016/j.chemosphere.2010.09.066
  21. Orfanidis, S., Stamatis, N., Ragias, V. and Schramm, W. (2005), "Eutrophication patterns in an eastern Mediterranean coastal lagoon: Vassova, Delta Nestos, Macedonia, Greece", Mediterr. Mar. Sci., 6(2), 17-30. https://doi.org/10.12681/mms.183
  22. Phadnis, S.H., Parlow, M.H., Levy, M., Ilver, D., Caulkins, C.M., Connors, J.B. and Dunn, B.E. (1996), "Surface localization of Helicobacter pylori urease and a heat shock protein homolog requires bacterial autolysis", Infect. Immun., 64(3), 905-912. https://doi.org/10.1128/IAI.64.3.905-912.1996
  23. Putra, H., Yasuhara, H., Kinoshita, N. and Hirata, A. (2017), "Application of magnesium to improve uniform distribution of precipitated minerals in 1-m column specimens", Geomech. Eng., 12(5), 803-813. https://doi.org/10.12989/gae.2017.12.5.803
  24. Seifan, M., Samani, A.K., and Berenjian, A. (2017), "New insights into the role of pH and aeration in the bacterial production of calcium carbonate", Appl. Microbiol. Biotechnol., 101(8), 3131-3142. https://doi.org/10.1007/s00253-017-8109-8
  25. Sidik, W.S., Canakci, H., Kilic, I.H. and Celik, F. (2014), "Applicability of biocementation for organic soil and its effect on permeability", Geomech. Eng., 7(6), 649-663. https://doi.org/10.12989/gae.2014.7.6.649
  26. Stocks-Fischer, S., Galinat, J.K. and Bang, S.S. (1999), "Microbiological precipitation of CaCO3", Soil Biol. Biochem., 31(11), 1563-1571. https://doi.org/10.1016/S0038-0717(99)00082-6
  27. Vera, J., Alvarez, R., Murano, E., Slebe, J.C. and Leon, O. (1998), "Identification of a marine agarolytic Pseudoalteromonas isolate and characterization of its extracellular agarase", Appl. Environ. Microbiol., 64(11), 4378-4383. https://doi.org/10.1128/AEM.64.11.4378-4383.1998
  28. Whiffin, V.S., van Paassen, L.A. and Harkes, M.P. (2007), "Microbial carbonate precipitation as a soil improvement technique", Geomicrobiol. J., 24(5), 417-423. https://doi.org/10.1080/01490450701436505
  29. Yasodian, S.E., Dutta, R.K., Mathew, L., Anima, T.M. and Seena, S.B. (2012). "Effect of microorganism on engineering properties of cohesive soils", Geomech. Eng., 4(2), 135-150. https://doi.org/10.12989/gae.2012.4.2.135
  30. Zhao, G.Z., Li, J., Qin, S., Zhang, Y.Q., Zhu, W.Y., Jiang, C.L., Xu, L.H. and Li, W.J. (2009), "Micrococcus yunnanensis sp. nov., a novel actinobacterium isolated from surface-sterilized Polyspora axillaris roots", Int. J. Syst. Evol. Microbiol., 59(10), 2383-2387. https://doi.org/10.1099/ijs.0.010256-0

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