참고문헌
- Barsby TL, Shepard JF, Kemble RJ, Wong R (1984) Somatic hybridization in the genus Solanum: S. tuberosum and S. brevidens. Plant Cell Rep 3:165-167 https://doi.org/10.1007/BF00270215
- Bidani A, Nouri-Ellouz O, Lakhoua L, Shihachakr D, Cheniclet C, Mahjoub A, Drira N, Gargouri-Bouzid R (2007) Interspecific potato somatic hybrids between Solanum berthaultii and Solanum tubersoum L. showed recombinant plastome and improved tolerance to salinity. Plant Cell Tiss Organ Cult 91:179-189 https://doi.org/10.1007/s11240-007-9284-6
- Binding H, Jain SM, Finger J, Mordhorst G, Nehls R, Gressel J (1982) Somatic hybridization of an atrazine resistant biotype of Solanum nigrum with Solanum tuberosum. Theor Appl Genet 63:273-277 https://doi.org/10.1007/BF00304007
- Bohs L, Olmstead RG (1997) Phylogenetic relationships in Solanum (Solanaceae) based on ndhF sequences. Syst Bot 22:5-17 https://doi.org/10.2307/2419674
- Calsa Junior T, Carraro DM, Benatti MR, Barbosa AC, Kitajima JP, Carrer H (2004) Structural features and transcript-editing analysis of sugarcane (Saccharum officinarum L.) chloroplast genome. Curr Genet 46:366-373 https://doi.org/10.1007/s00294-004-0542-4
- Chen L, Guo X, Xie C, He L, Cai X, Tian L, Song B, Liu J (2013) Nuclear and cytoplasmic genome components of Solanum tuberosum + S. chacoense somatic hybrids and three SSR alleles related to bacterial wilt resistance. Theor Appl Genet 126:1861-1872 https://doi.org/10.1007/s00122-013-2098-5
- Cho KS, Cheon KS, Hong SY, Cho JH, Im JS, Mekapogu M, Yu YS, Park TH (2016) Complete chloroplast genome sequences of Solanum commersonii and its application to chloroplast genotype in somatic hybrids with Solanum tuberosum. Plant Cell Rep 35:2113-2123 https://doi.org/10.1007/s00299-016-2022-y
- Cho HM, Kim-Lee HY, Om YH, Kim JK (1997) Influence of endosperm balance number (EBN) in interploidal and interspecific crosses between Solanum tuberosum dihaploids and wild species. Korean J Breed 29:154-161
- Cho KS, Park TH (2016) Complete chloroplast genome sequence of Solanum nigrum and Development of markers for the discrimination of S. nigrum. Hort Environ Biotechnol 57:69-78 https://doi.org/10.1007/s13580-016-0003-2
- Cho K-S, Yun B-K, Yoon Y-H, Hong S-Y, Mekapogu M, Kim K-H, Yang T-J (2015) Complete chloroplast genome sequence of tartary Buckwheat (Fagopyrum tataricum) and comparative analysis with common Buckwheat (F. esculentum). PloS One 10:e0125332 https://doi.org/10.1371/journal.pone.0125332
- Chung HJ, Jung JD, Park HW, Kim JH, Cha HW, Min SR, Jeong WJ, Liu JR (2006) The complete chloroplast genome sequences of Solanum tuberosum and comparative analysis with Solanaceae species identified the presence of a 241-bp in cultivated potato chloroplast DNA sequence. Plant Cell Rep 25:1369-1379 https://doi.org/10.1007/s00299-006-0196-4
- Daniell H, Lee S-B, Grevich J, Saski C, Quesada-Vargas T, Guda C, Tomkins J, Jansen PK (2006) Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes. Theor Appl Genet 112:1503-1518 https://doi.org/10.1007/s00122-006-0254-x
- Ewing EE, Simko I, Samrt CD, Bonierbale MW, Mizubuti ESG, May GD, Fry WE (2000) Genetic mapping from field tests of qualitative and quantitative resistance to Phytophthora infestans in a population derived from Solanum tuberosum and Solanum berthaultii. Mol Breeding 6:25-36 https://doi.org/10.1023/A:1009648408198
- Guo WW, Cai XD, Grosser JW (2004) Somatic cell cybrids and hybrids in plant improvement, p. 635-659. In: H. Daniell, C. Chase (eds.) Molecular biology and biotechnology of plant organelles. Springer, Dordrecht, The Netherlands.
- Hosaka K, Sanetomo R (2012) Development of a rapid identification method for potato cytoplasm and its use for evaluating Japanese collections. Theor Appl Genet 125:1237-1251 https://doi.org/10.1007/s00122-012-1909-4
- Jheng C-F, Chen T-C, Lin J-Y, Chen T-C, Wu W-L, Chang C-C (2012) The comparative chloroplast genomic analysis of photosynthetic orchids and developing DNA markers to distinguish Phalaenopsis orchids. Plant Sci 190:62-73 https://doi.org/10.1016/j.plantsci.2012.04.001
- Kim KJ, Choi KS, Jansen RK (2005) Two chloroplast DNA inversion originated simultaneously during the early evolution of the sunflower family (Asteraceae). Mol Biol Evol 22:1783-1792 https://doi.org/10.1093/molbev/msi174
- Kim-Lee H, Moon JS, Hong YJ, Kim MS, Cho HM (2005) Bacterial wilt resistance in the progenies of the fusion hybrids between haploid of potato and Solanum commersonii. Amer J Potato Res 82:129-137 https://doi.org/10.1007/BF02853650
- Komori T, Nitta N (2005) Utilization of the CAPS/dCAPS method to convert rice SNPs into PCR-based markers. Breed Sci 55:93-98 https://doi.org/10.1270/jsbbs.55.93
- Konieczny A, Ausubel FM (1993) A procedure for mapping Arabidopsis mutations using co-dominant ecotype-specific PCR-based markers. Plant J 4:403-410 https://doi.org/10.1046/j.1365-313X.1993.04020403.x
- Kurtz S, Phillippy A, Delcher AL, Smoot M, Shumway M, Antonescu C, Salzberg SL (2004) Versatile and open software for comparing large genomes. Genome Biol 5:R12 https://doi.org/10.1186/gb-2004-5-2-r12
- Lohse M, Drechsel O, Kahlau S, Bock R (2013) Organellar GenomeDRAW - a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets. Nucleic Acids Res 41:W575-W581 https://doi.org/10.1093/nar/gkt289
- Lossl A, Gotz A, Braun A, Wenzel G (2000) Molecular markers for cytoplasm in potato: male sterility and contribution of different plastid-mitochondrial configurations to starch production. Euphytica 116:221-230 https://doi.org/10.1023/A:1004039320227
- Mohapatra T, Kirti PB, Dinesh Kumar V, Prakash S, Chopra VL (1998) Random chloroplast segregation and mitochondrial genome recombination in somatic hybrid plants of Diplotaxis catholica + Brassica juncea. Plant Cell Rep 17:814-818 https://doi.org/10.1007/s002990050489
- Nouri-Ellouz O, Triki MA, Jbir-Koubaa R, Louhichi A, Charfeddine S, Drira N, Gargouri-Bouzid R (2016) Somatic hybrids between potato and S. berthaultii show partial resistance to soil-borne fungi and potato virus Y. J Phythpathol 164:485-496 https://doi.org/10.1111/jph.12474
- Ortiz R, Ehlenfeldt MK (1992) The importance of endorsperm balance number in potato breeding and the evolution of tuber-bearing Solanum species. Euphytica 60:105-113
- Palmer JD (1991) Plastid chromosomes: structure and evolution, p. 5-53. In: L. Bogorad, K. Vasil (eds.) The molecular biology of plastids. Academic Press, San Diego, USA.
- Park T-H (2017) The complete chloroplast genome of Solanum berthaultii, one of the potato wild relative species. Mitochondr DNA Part B 2:88-89 https://doi.org/10.1080/23802359.2017.1285213
- Park T-H, Foster S, Brigneti G, Jones JDG (2009) Two distinct potato late blight resistance genes from Solanum berthaultii are located on chromosome 10. Euphytica 165:269-278 https://doi.org/10.1007/s10681-008-9784-4
- Park T-H, Gros J, Sikkema A, Vleeshouwers VGAA, Muskens M, Allefs S, Jacobsen E, Visser RGF, van der Vossen EAG (2005) The late blight resistance locus Rpi-blb3 from Solanum bulbocastanum belongs to a major late blight R gene cluster on chromosome 4 of potato. Mol Plant-Microb Interact 18:722-729 https://doi.org/10.1094/MPMI-18-0722
- Pavek JJ, Corsini DL (2001) Utilization of potato genetic resources in variety development. Amer J Potato Res 78:433-441 https://doi.org/10.1007/BF02896375
- Puite KJ, Roest S, Pijnacker LP (1986) Somatic hybrid potato plants after electrofusion of diploid Solanum tuberosum and Solanum phureja. Plant Cell Rep 5:262-265 https://doi.org/10.1007/BF00269817
- Raubeson LA, Jansen RK (2005) Chloroplast genomes of plants, p. 45-68. In: H. Henry (ed.) Diversity and evolution of plants:genotypic and phenotypic variation in higher plants. CABI Publishing, Wallingford, UK.
- Rauscher GM, Samrt CD, Simko I, Bonierbale M, Mayton H, Greenland A and Fry WE (2006) Characterization and mapping of Rpi-ber, a novel potato late blight resistance gene from Solanum berthaultii. Theor Appl Genet 112:674-687 https://doi.org/10.1007/s00122-005-0171-4
- Rauscher G, Simko I, Mayton H, Bonierbale M, Smart CD, Grunwald NJ, Greenland A, Fry WE (2010) Quantitative resistance to late blight from Solanum berthaultii cosegregates with Rpi-ber: insights in stability through isolates and environment. Theor Appl Genet 121:1553-1567 https://doi.org/10.1007/s00122-010-1410-x
- Saski C, Lee SB, Daniell H, Wood TC, Tomkins J, Kim HG, Jansen RK (2005) Complete chloroplast genome sequence of Glycine max and comparative analyses with other legume genomes. Plant Mol Biol 59:309-322 https://doi.org/10.1007/s11103-005-8882-0
- Schwartz S, Kent WJ, Smit A, Zhang Z, Baertsch R, Hardison RC, Haussler D, Miller W (2003) Human-mouse alignments with BLASTZ. Genome Res 13:103-107 https://doi.org/10.1101/gr.809403
- Smilde WD, Brigneti G, Jagger L, Perkins S, Jones JDG (2005) Solanum mochiquense chromosome IX carries a novel late blight resistance gene Rpi-moc1. Theor Appl Genet 110:252-258 https://doi.org/10.1007/s00122-004-1820-8
- Spooner DM, Castillo R (1997) Reexamination of series relationships of South American wild potatoes (Solanaceae: Solanum sect. Petato) : evidence from chloroplast DNA restriction site variation. Am J Botany 84:671-685 https://doi.org/10.2307/2445904
- Sugiura M, Hirose T, Sugita M (1998) Evolution and mechanism of translation in chloroplast. Annu Rev Genet 32:437-459 https://doi.org/10.1146/annurev.genet.32.1.437
- Swofford DL (2001) Phylogenetic analysis using parsimony (* and other methods). Sinauer Associates, Sunderland
- Symda-Dajmund P, Sliwka J, Wasilewicz-Flis I, Jakuczun H, Zimnoch-Guzowska E (2016) Genetic composition of interspecific potato somatic hybrids and autofused 4x plants evaluated by DArT and cytoplasmic DNA markers. Plant Cell Rep 35:1345-1358 https://doi.org/10.1007/s00299-016-1966-2
- Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013) MEGA6: molecular evolutionary genetic analysis version 6.0. Mol Biol Evol 30:2725-2729 https://doi.org/10.1093/molbev/mst197
- Tan MYA, Hutten RCB, Visser RGF, van Eck HJ (2010) The effect of pyramiding of Phytophthora infestans resistance genes Rpi-mcd1 and Rpi-ber in potato. Theor Appl Genet 121:117-125 https://doi.org/10.1007/s00122-010-1295-8
- Uncu AT, Celik I, Devran Z, Ozkaynak E, Frary A, Frary A, Doganlar S (2015) Development of a SNP-based CAPS assay for the Me1 gene conferring resistance to root knot nematode in pepper. Euphytica 206:393-399 https://doi.org/10.1007/s10681-015-1489-x
- Uribe P, Jansky S, Halterman D (2014) Two CAPS markers predict Verticillium wilt resistance in wild Solanum species. Mol Breeding 33:465-476 https://doi.org/10.1007/s11032-013-9965-2
- Wang Y, Liu W, Xu L, Wang Y, Chen Y, Luo X, Tang M, Liu L (2017) Development of SNP markers based on transcriptome sequences and their application in germplasm identification in radish (Raphanus sativus L.). Mol Breeding 37:26 https://doi.org/10.1007/s11032-017-0632-x
- Wyman SK, Jansen RK, Boore JL (2004) Antomatic annotation of organellar genomes with DOGMA. Bioinformatics 20:3252-3255 https://doi.org/10.1093/bioinformatics/bth352
- Xiang F, Xia G, Zhi D, Wang J, Nie H, Chen H (2004) Regeneration of somatic hybrids in relation to the nuclear and cytoplasmic genomes of wheat and Setaria italica. Genome 47:680-688 https://doi.org/10.1139/g04-023
- Yurina NP, Odintsova MS (1998) Comparative structural organization of plant chloroplast and mitochondrial genomes. Russ J Genet 34:5-22
- Zeka D, Sedlak P, Sedlakova V, Vasek J, Domkarova J, Vejl P (2014) cpDNA SSR polymorphism in secondary germplasm of potato maintained in Czech gene bank. Pak J Agr Sci 51:743-748