References
- Abo-El-Saad, M. and Wu, R. 1995. A rice membrane calcium-dependent protein kinase is induced by gibberellin in rice leaf sheath. Plant Mol. Biol. 55, 541-552.
- Anil, V. S. and Rao, S. K. 2000. Calcium-mediated signalling during sandalwood somatic embryogenesis. Role for exogenous calcium as second messenger. Plant Physiol. 123, 1301-1311. https://doi.org/10.1104/pp.123.4.1301
- Anil, V. S., Harmon, A. C. and Rao, S. K. 2000. Spatio-temporal accumulation and activity of calcium-dependent protein kinases during embryogenesis, seed development, and germination in sandalwood. Plant Physiol. 122, 1035-1043. https://doi.org/10.1104/pp.122.4.1035
- Asano, T., Kunieda, N., Omura, Y., Ibe, H., Kawasaki, T., Takano, M., Sato, M., Furuhashi, H., Mujin, T., Takaiwa, F., Wu, C., Tada, Y., Satozawa, T., Sakamoto, M. and Shimada, H. 2002. Rice SPK, a calmodulin-like domain protein kinase, is required for storage product accumulation during seed development: phosphorylation of sucrose synthase is a possible factor. Plant Cell 14, 619-628. https://doi.org/10.1105/tpc.010454
- Asano, T., Tanaka, N., Yang, G., Hayash, N. and Komatsu, S. 2005. Genome-wide identification of the rice calcium-dependent protein kinase and its closely related kinase gene families: Comprehensive analysis of the CDPKs gene family in rice. Plant Cell Physiol. 46, 356-366. https://doi.org/10.1093/pcp/pci035
- Asano, T., Hakata, M., Nakamura, H., Aoki, N., Komatsu, S., Ichikawa, H., Hirochika, H. and Ohsugi, R. 2011. Functional characterisation of OsCPK21, a calcium-dependent protein kinase that confers salt tolerance in rice. Plant Mol. Biol. 75, 179-191. https://doi.org/10.1007/s11103-010-9717-1
- Berridge, M. J., Lipp, P. and Bootman, M. D. 2000. The versatility and universality of calcium signalling. Nat. Rev. Mol. Cell Biol. 1, 11-21.
- Bethke, P. C., Schuurink, R. and Jones, R. L. 1997. Hormonal signaling in cereal aleurone. J. Exp. Bot. 48, 1337-1356. https://doi.org/10.1093/jxb/48.7.1337
-
Bush, D. S. and Jones, R. L. 1988. Cytoplasmic calcium and
${\alpha}$ -amylase secretion from barley aleurone protoplasts. Eur. J. Cell Biol. 46, 466-469. - Bush, D. S. 1995. Calcium regulation in plant cells and its role in signaling. Annu. Rev. Plant Physiol. Plant Mol. Biol. 46, 95-122. https://doi.org/10.1146/annurev.pp.46.060195.000523
- Cheng, S. H., Willmann, M. R., Chen, H. C. and Sheen, J. 2002. Calcium signaling through protein kinases. The Arabidopsis calcium-dependent protein kinase gene family. Plant Physiol. 129, 469-485. https://doi.org/10.1104/pp.005645
- Cheong, Y. H., Kim, K. N., Pandey, G. K., Gupta, R., Granta, J. J. and Luan, S. 2003. CBL1, a calcium sensor that differentially regulates salt, drought, and cold responses in Arabidopsis. Plant Cell 15, 1833-1845. https://doi.org/10.1105/tpc.012393
- Chin, D. and Means, A. R. 2000. Calmodulin: a prototypical calcium sensor. Trends Cell Biol. 10, 322-328. https://doi.org/10.1016/S0962-8924(00)01800-6
- Christodoulou, J., Malmendal, A., Harper, J. F. and Chazin, W. J. 2004. Evidence for differing roles for each lobe of the calmodulin-like domain in a calcium-dependent protein kinase. J. Biol. Chem. 279, 29092-29100. https://doi.org/10.1074/jbc.M401297200
- Cohen, S. N., Chang, A. C. Y. and Hsu, L. 1972. Nonchromosomal antibiotic resistance in bacteria: Genetic transformation of Escherichia coli by R-factor DNA. Proc. Nat. Acad. Sci. USA 69, 2110-2114. https://doi.org/10.1073/pnas.69.8.2110
- Day, P. M. 2008. Phosphatidylinositol 3-kinase is a positive regulator of gibberellin signaling. Ph.D. thesis, Penn State University, USA.
- Ellard-lvey, M., Hopkins, P. B., White, T. J. and Lomax, T. L. 1999. Cloning, expression and N-terminal myristoylation of CpCPK, a calcium-dependent protein kinase from zucchini (Curbita pepo L). Plant Mol. Biol. 39, 199-208. https://doi.org/10.1023/A:1006125918023
- Evans, N. H., McAinsh, M. R. and Hetherington, A. M. 2001. Calcium oscillations in higher plants. Curr. Opin. Plant Biol. 4, 415-420. https://doi.org/10.1016/S1369-5266(00)00194-1
-
Harmon, A. C., Gribskov, M. and Harper, J. F. 2000. CDPKs-a kinase for every
$Ca^{2+}$ signal? Trends Plant Sci. 5, 154-159. https://doi.org/10.1016/S1360-1385(00)01577-6 - Harper, J. F., Sussman, M. R., Schaller, G. E., Putnam-Evans, C., Charbonneau, H. and Harmon, A. 1991. A calcium-dependent protein kinase with a regulatory domain similar to calmodulin. Science 252, 951-954. https://doi.org/10.1126/science.1852075
- Harper, J. F. 2001. Dissecting calcium oscillators in plant cells. Trends Plant Sci. 6, 395-397. https://doi.org/10.1016/S1360-1385(01)02023-4
- Hirochika, H., Sugimoto, K., Otsuki, Y., Tsugawa, H. and Kanada, M. 1996. Retrotransposons of rice involved in mutations induced by tissue culture. Proc. Natl. Acad. Sci. USA 93, 7783-7788. https://doi.org/10.1073/pnas.93.15.7783
- Hernandez, S., Hardin, S., Clouse, S., Kieber, J. and Huber, S. 2004. Identification of a new motif for CDPK phosphorylation in vitro that suggest ACC synthase may be a CDPK substrate. Arch. Biochem. Biophys. 428, 81-91. https://doi.org/10.1016/j.abb.2004.04.025
- Hrabak, E. M., Chan, C. W., Gribskov, M., Harper, J. F., Choi, J. H., Halford, N., Kudla, J., Luan, S., Nimmo, H. G., Sussman, M. R., Thomas, M., Walker-Simmons, K., Zhu, J. K. and Harmon, A. C. 2003. The Arabidopsis CDPK-SnRK superfamily of protein kinases. Plant Physiol. 132, 666-680. https://doi.org/10.1104/pp.102.011999
- International Rice Genome Sequencing Project. 2005. The map-based sequence of the rice genome. Nature 436, 793-800. https://doi.org/10.1038/nature03895
- Kang, H., Park, S., Matsuoka, M. and An, G. 2005. Whitecore endosperm floury endosperm-4 in rice is generated by knockout mutations in the C4-type pyruvate orthophosphate dikinase gene (OsPPKB). Plant J. 42, 901-911. https://doi.org/10.1111/j.1365-313X.2005.02423.x
- Knight, H. and Knight, M. R. 2001. Abiotic stress signalling pathways: specificity and cross-talk. Trends Plant Sci. 6, 262-267. https://doi.org/10.1016/S1360-1385(01)01946-X
- Kolukisaoglu, U., Weinl, S., Blazevic, D., Batistic, O. and Kudla, J. 2004. Calcium sensors and their interacting protein kinases: genomics of the Arabidopsis and rice CBL-CIPK signalling networks. Plant Physiol. 134, 43-58. https://doi.org/10.1104/pp.103.033068
- Laemmli, U. K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 277, 680-685.
- Lehninger, A. L., Nelson, D. L. and Cox, M. M. 1993. Principles of biochemistry, pp. 772, 2nd ed., Worth Publishers, NY, USA.
- Lee, S. H. 2009. Functional characterization of OsCPK11, a calcium-dependent protein kinase gene from rice and its cDNA cloning. Master's thesis. Korea National University of Education, Chungbuk, Korea.
- Lee, J. E. 2008. Functional analysis of OsCPK11, a calciumdependent protein kinase gene from rice. Master's thesis. Korea National University of Education, Chungbuk, Korea.
- Li, J., Lee, Y. R. and Assmann S. M. 1998. Guard cells possess a calcium-dependent protein kinase that phosphorylates the KAT1 potassium channel. Plant Physiol. 116, 785-795. https://doi.org/10.1104/pp.116.2.785
- Lu, S. X. and Hrabak, E. M. 2002. An Arabidopsis calcium-dependent protein kinase is associated with the endoplasmic reticulum. Plant Physiol. 128, 1008-1021. https://doi.org/10.1104/pp.010770
- Maria, K. and Grazyna, M. 2007. Structure and functions of plant calcium-dependent protein kinases. Acta Biochim. Polonica 54, 219-233.
- Martin, M. L. and Busconi, L. 2000. Membrane localization of a rice calcium-dependent protein kinase (CDPK) is mediated by myristoylation and palmitoylation. Plant J. 24, 429-435. https://doi.org/10.1046/j.1365-313x.2000.00889.x
- Nelson, D. L. and Cox, M. M. 2013. Lehninger principles of biochemistry, 6th ed., Freeman and Company, NY, USA.
- Nelson, L. E. and Pan, D. 1995. Starch synthesis in maize endosperms. Annu. Rev. Plant Physiol. Plant Mol. Biol. 46, 475-496. https://doi.org/10.1146/annurev.pp.46.060195.002355
- Racies, M., Gargantini, P. R., Chinchilla, D., Crespi, M., Tellez-Inon, M. T. and Ulloa, R. M. 2003. Regulation of CDPK isoforms during tuber development. Plant Mol. Biol. 52, 1011-1024. https://doi.org/10.1023/A:1025478315648
- Ritchie, S. and Gilroy, S. 1998. Gibberellins: regulating genes and germination. New Phytol. 140, 363-383. https://doi.org/10.1046/j.1469-8137.1998.00299.x
- Saijo, Y., Hata, S., Kyozuka, J., Shimamoto, K. and Izuki, K. 2000. Over-expression of a single Ca2+-dependent protein kinase confers both cold and salt/drought tolerance on rice plants. Plant J. 23, 319-327. https://doi.org/10.1046/j.1365-313x.2000.00787.x
- Sanders, D., Brownlee, C. and Harper, J. F. 1999. Communicating with calcium. Plant Cell 11, 691-706. https://doi.org/10.1105/tpc.11.4.691
- Sanders, D., Pelloux, J., Brownlee, C. and Harper, J. F. 2002. Calcium at the crossroads of signalling. Plant Cell 14 (Suppl), S401-S417. https://doi.org/10.1105/tpc.002899
- Sasaki, T. and Burr, B. 2000. International Rice Genome Sequencing Project: the effort to completely sequence the rice genome. Curr. Opin. Plant Biol. 3, 138-141. https://doi.org/10.1016/S1369-5266(99)00047-3
- Satoh, H. and Omura, T. 1981. New endosperm mutations induced by chemical mutagen in rice, Oryza sativa L. Jap. J. Breed. 31, 316-326. https://doi.org/10.1270/jsbbs1951.31.316
- Shen, W., Tao, G. Q., Li, D. C., Zhu, X. G., Bai, X. and Cai, B. 2008. Inhibition of pancreatic carcinoma cell growth in vitro by DPK4 gene transfection. World J. Gastroenterol. 14, 6254-6260. https://doi.org/10.3748/wjg.14.6254
- Taiz, L., Zeiger, E., Moller, I. M. and Murphy, A. 2015. Plant physiology and development, 6th ed., Sinauer Associates, MA, USA.
- Takada, A., Berezikov, E., Yamashita, Y., Laqos-Quintana, M., Kloosterman, W. P., Enomoto, M., Hatanaka, H., Fujiwara, S., Watanabe, H., Soda, M., Choi, Y. L., Plasterk, R. H., Cuppen, E. and Mano, H. 2006. Mouse microRNA profiles determined with a new and sensitive cloning method. Nucl. Acids Res. 34, e115. https://doi.org/10.1093/nar/gkl653
- Thompson, J. D., Higgins, D. G. and Gibson, T. J. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucl. Acids Res. 22, 4673-4680. https://doi.org/10.1093/nar/22.22.4673
-
Trewavas, A. J. and Malho, R. 1998.
$Ca^{2+}$ signalling in plant cells: the big network! Curr. Opin. Plant Biol. 1, 428-433. https://doi.org/10.1016/S1369-5266(98)80268-9 -
Wan, B., Lin, Y. and Mou, T. 2007 Expression of rice
$Ca^{2+}$ -dependent protein kinases genes under different environmental stresses. FEBS Lett. 581, 1179-1189. https://doi.org/10.1016/j.febslet.2007.02.030 - Yang, G., Shen, S., Yang, S. and Komatsu, S. 2003. OsCDPK13, a calcium-dependent protein kinase gene from rice, is induced in response to cold and gibberellin. Plant Physiol. Biochem. 41, 369-374. https://doi.org/10.1016/S0981-9428(03)00032-9
- Ye, S., Wang, L., Xie, W., Wan, B., Li, X. and Lin, Y. 2009. Expression profile of calcium-dependent protein kinase (CDPKs) genes during the whole lifespan and under phytohormone treatment conditions in rice (Oryza sativa L. ssp. indica). Plant Mol. Biol. 70, 311-325 . https://doi.org/10.1007/s11103-009-9475-0
-
Zhang, X. and Chollet, R. 1997. Seryl-phosphorylation of soybean nodule sucrose synthase (nodulin-100) by a
$Ca^{2+}$ -dependent protein kinase. FEBS Lett. 410, 126-130. https://doi.org/10.1016/S0014-5793(97)00537-1 - Zhang, M., Liang, S. and Lu, Y. T. 2005. Cloning and functional characterization of NtCPK4, a new tobacco calcium-dependent protein kinase. Biochim. Biophys. Acta 1729, 174-185. https://doi.org/10.1016/j.bbaexp.2005.04.006
- Zhang, T., Wang, Q., Chen, X., Tian, C., Wang, X., Xing, T., Li, Y. and Wang, Y. 2005. Cloning and biochemical properties of CDPK gene OsCDPK14 from rice. J. Plant Physiol. 162, 1149-1159. https://doi.org/10.1016/j.jplph.2004.12.010
- Zhijun, X., Shulan, Z. and Xhuo, Z. 2007 Expression and significance of the protein and mRNA of metastasis suppressor gene ME491/CD63 and integrin alpha5 in ovarian cancer tissues. Eur. J. Gynaecol. Oncol. 28, 179-183.