Korean Journal of Poultry Science (한국가금학회지)

The Korean Society of Poultry Science (한국가금학회)
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Genetic Diversity Analyses of Asian Duck Populations using 24 Microsatellite Markers

  • Sultana, Hasina (Department of Animal and Dairy Science, Chungnam National University) ;
  • Seo, Dongwon (Department of Animal and Dairy Science, Chungnam National University) ;
  • Choi, Nu-Ri (Department of Animal and Dairy Science, Chungnam National University) ;
  • Kim, Yeon-Su (Department of Animal and Dairy Science, Chungnam National University) ;
  • Manjula, Prabuddha (Department of Animal and Dairy Science, Chungnam National University) ;
  • Bhuiyan, Md. Shamsul Alam (Department of Animal and Dairy Science, Chungnam National University) ;
  • Heo, Kang-Nyeong (Poultry Research Institute, National Institute of Animal Science, RDA) ;
  • Lee, Jun-Heon (Department of Animal and Dairy Science, Chungnam National University)
  • Received : 2017.04.05
  • Accepted : 2017.06.22
  • Published : 2017.06.30
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Abstract

A total of 340 individuals from seven duck populations were studied using 24 polymorphic microsatellite (MS) markers to identify plumage colors with genetic diversity. The estimated average number of alleles (Na), polymorphic information content (PIC) value, and expected heterozygosity (He) per locus of all populations were 11.5, 0.602, and 0.635, respectively. The calculated population genetic distance (Fst), inbreeding coefficient of individuals within duck populations (Fis), and total inbreeding among populations (Fit) were 0.135, 0.105, and 0.229, respectively. Statistical analyses for each population using 24 marker combinations, revealed that the estimated average number of effective alleles (Ne), observed heterozygosity (Ho), and fixation index of inbreeding within populations (F) were 3.129, 0.505, and 0.104, respectively. The results of genetic distance and phylogenetic analysis revealed that Korean native duck populations were clearly separated from all Bangladeshi duck populations. Moreover, all populations clustered well according to their genetic distance, but could not be clearly separated according to black and white plumage colors or plumage color pattern. The combination of these 24 MS markers can be used for discrimination and determination of the genetic diversity of native duck breeds in further investigations for conservation and special development purposes.

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References

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