References
- Allen, A. E., Dupont, C. L., Obornik, M., Horak, A., Nunes-Nesi, A., Mccrow, J. P., Zheng, H., Johnson, D. A., Hu, H., Fernie, A. R. & Bowler, C. 2011. Evolution and metabolic significance of the urea cycle in photosynthetic diatoms. Nature 473:203-207. https://doi.org/10.1038/nature10074
- Allen, A. E., Vardi, A. & Bowler, C. 2006. An ecological and evolutionary context for integrated nitrogen metabolism and related signaling pathways in marine diatoms. Curr. Opin. Plant Biol. 9:264-273. https://doi.org/10.1016/j.pbi.2006.03.013
- Blank, G. S., Robinson, D. H. & Sullivan, C. W. 1986. Diatom mineralization of silicic acid. VIII. Metabolic requirements and the timing of protein synthesis. J. Phycol. 22:382-389. https://doi.org/10.1111/j.1529-8817.1986.tb00039.x
- Falkowski, P. G. & Raven, J. A. 2007. Aquatic photosynthesis. 2nd ed. Princeton University Press, Princeton, 488 pp.
- Fanesi, A., Raven, J. A. & Giordano, M. 2014. Growth rate affects the responses of the green alga Tetraselmis suecica to external perturbations. Plant Cell Environ. 37:512-519. https://doi.org/10.1111/pce.12176
- Geider, R. J. & Osborne, B. A. 1989. Respiration and microalgal growth: a review of the quantitative relationship between dark respiration and growth. New Phytol. 112:327-341. https://doi.org/10.1111/j.1469-8137.1989.tb00321.x
- Giordano, M. 2013. Homeostasis: an underestimated focal point of ecology and evolution. Plant Sci. 211:92-101. https://doi.org/10.1016/j.plantsci.2013.07.008
- Giordano, M., Kansiz, M., Heraud, P., Beardall, J., Wood, B. & McNaughton, D. 2001. Fourier transform infrared spectroscopy as a novel tool to investigate changes in intracellular macromolecular pools in the marine microalga Chaetoceros muellerii (Bacillariophyceae). J. Phycol. 37:271-279. https://doi.org/10.1046/j.1529-8817.2001.037002271.x
- Goormaghtigh, E., Cabiaux, V. & Ruysschaert, J. M. 1990. Secondary structure and dosage of soluble and membrane proteins by attenuated total reflection Fourier-transform infrared spectroscopy on hydrated films. Eur. J. Biochem. 193:409-420. https://doi.org/10.1111/j.1432-1033.1990.tb19354.x
- Heise, H. M. 1997. Medical applications of infrared spectroscopy. Mikrochim. Acta Suppl. 14:67-77.
- Hockin, N. L., Mock, T., Mulholland, F., Kopriva, S. & Malin, G. 2012. The response of diatom central carbon metabolism to nitrogen starvation is different from that of green algae and higher plants. Plant Physiol. 158:299-312. https://doi.org/10.1104/pp.111.184333
- Huppe, H. C. & Turpin, D. H. 1994. Integration of carbon and nitrogen metabolism in plant and algal cells. Annu. Rev. Plant Physiol. Plant Mol. Biol. 45:577-607. https://doi.org/10.1146/annurev.pp.45.060194.003045
- Kong, J. & Yu, S. 2007. Fourier transform infrared spectroscopic analysis of protein secondary structures. Acta Biochim. Biophys. Sin. 39:549-559. https://doi.org/10.1111/j.1745-7270.2007.00320.x
- Marchetti, A., Varela, D. E., Lance, V. P., Johnson, Z., Palmucci, M., Giordano, M. & Armbrust, E. V. 2010. Iron and silicic acid effects on phytoplankton productivity, diversity, and chemical composition in the central equatorial Pacific Ocean.Limnol. Oceanogr. 55:11-29. https://doi.org/10.4319/lo.2010.55.1.0011
-
Montechiaro, F. & Giordano, M. 2010. Compositional homeostasis of the dinoflagellate Protoceratium reticulatum grown at three different
$pCO_2$ . J. Plant Physiol. 167:110-113. https://doi.org/10.1016/j.jplph.2009.07.013 - Naumann, D., Helm, D. & Labischinski, H. 1991. Microbiological characterizations by FT-IR spectroscopy. Nature 351:81-82. https://doi.org/10.1038/351081a0
- Norici, A., Bazzoni, A. M., Pugnetti, A., Raven, J. A. & Giordano, M. 2011. Impact of irradiance on the C allocation in the coastal marine diatom Skeletonema marinoi Sarno and Zingone. Plant Cell Environ. 34:1666-1677. https://doi.org/10.1111/j.1365-3040.2011.02362.x
- Palmucci, M. & Giordano, M. 2012. Is cell composition related to the phylogenesis of microalgae? An investigation using Hierarchical Cluster Analysis of Fourier Transform Infrared spectra of whole cells. Environ. Exp. Bot. 75:220-224. https://doi.org/10.1016/j.envexpbot.2011.07.005
- Palmucci, M., Ratti, S. & Giordano, M. 2011. Ecological and evolutionary implications of carbon allocation in marine phytoplankton as a function of nitrogen availability: a Fourier transform infrared spectroscopy approach. J. Phycol. 47:313-323. https://doi.org/10.1111/j.1529-8817.2011.00963.x
- Pantorno, A., Holland, D. P., Stojkovic, S. & Beardall, J. 2013. Impacts of nitrogen limitation on the sinking rate of the coccolithophorid Emiliania huxleyi (Prymnesiophyceae). Phycologia 52:288-294. https://doi.org/10.2216/12-064.1
-
Pierangelini, M., Raven, J. A. & Giordano, M. 2016. The relative availability of inorganic carbon and inorganic nitrogen influences the response of the dinoflagellate Protoceratium reticulatum to elevated
$CO_2$ . J. Phycol. 53:298-307. - Provasoli, L., McLachlan, J. J. A. & Droop, M. R. 1957. The development of artificial media for marine algae. Arch. Mikrobiol. 25:392-428. https://doi.org/10.1007/BF00446694
- Ratti, S., Knoll, A. H. & Giordano, M. 2013. Grazers and phytoplankton growth in the oceans: an experimental and evolutionary perspective. PLoS ONE 8:e77349. https://doi.org/10.1371/journal.pone.0077349
- Raven, J. A., Giordano, M., Beardall, J. & Maberly, S. C. 2011. Algal and aquatic plant carbon concentrating mechanisms in relation to environmental change. Photosynth. Res. 109:281-296. https://doi.org/10.1007/s11120-011-9632-6
-
Raven, J. A., Giordano, M., Beardall, J. & Maberly, S. C. 2012. Algal evolution in relation to atmospheric
$CO_2$ : carboxylases, carbon-concentrating mechanisms and carbon oxidation cycles. Philos. Trans. R. Soc. B 367:493-507. https://doi.org/10.1098/rstb.2011.0212 -
Ruan, Z. & Giordano, M. 2017. The use of
$NH{_4}^+$ rather than$NO{_3}^-$ affects cell stoichiometry, C allocation, photosynthesis and growth in the cyanobacterium Synechococcus sp. UTEX LB 2380, only when energy is limiting. Plant Cell Environ. 40:227-236. https://doi.org/10.1111/pce.12858 - Sackett, O., Armand, L., Beardall, J., Hill, R., Doblin, M., Connelly, C., Howes, J., Stuart, B., Ralph, P. & Heraud, P. 2014. Taxon-specific responses of Southern Ocean diatoms to Fe enrichment revealed by synchrotron radiation FTIR microspectroscopy. Biogeosciences 11:5795-5808. https://doi.org/10.5194/bg-11-5795-2014
Cited by
- Development of a process model for simultaneous saccharification and fermentation (SSF) of algal starch to third-generation bioethanol pp.1759-7277, 2018, https://doi.org/10.1080/17597269.2018.1426162
- Metabolite Quantification by Fourier Transform Infrared Spectroscopy in Diatoms: Proof of Concept on Phaeodactylum tricornutum vol.12, pp.None, 2017, https://doi.org/10.3389/fpls.2021.756421