참고문헌
- Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT and others (2000) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 25:25-9
- Choudhary SP, Yu JQ, Yamaguchi-Shinozaki K, Shinozaki K, Tran LS (2012) Benefits of brassinosteroid crosstalk. Trends Plant Sci 17:594-605 https://doi.org/10.1016/j.tplants.2012.05.012
- Divi UK, Krishna P (2009) Brassinosteroid: a biotechnological target for enhancing crop yield and stress tolerance. N Biotechnol 26:131-6. https://doi.org/10.1016/j.nbt.2009.07.006
- Divi UK, Rahman T, Krishna P (2010) Brassinosteroid-mediated stress tolerance in Arabidopsis shows interactions with abscisic acid, ethylene and salicylic acid pathways. BMC Plant Biol 10:151 https://doi.org/10.1186/1471-2229-10-151
- Gampala SS, Kim TW, He JX, Tang W, Deng Z, Bai MY, Guan S, Lalonde S, Sun Y, Gendron JM and others (2007) An essential role for 14-3-3 proteins in brassinosteroid signal transduction in Arabidopsis. Dev Cell 13:177-89 https://doi.org/10.1016/j.devcel.2007.06.009
- Gendron JM, Wang ZY (2007) Multiple mechanisms modulate brassinosteroid signaling. Curr Opin Plant Biol 10:436-41 https://doi.org/10.1016/j.pbi.2007.08.015
- Harnsomburana J, Green JM, Barb AS, Schaeffer M, Vincent L, Shyu CR (2011) Computable visually observed phenotype ontological framework for plants. BMC Bioinformatics 12:260 https://doi.org/10.1186/1471-2105-12-260
- He JX, Gendron JM, Yang Y, Li J, Wang ZY (2002) The GSK3-like kinase BIN2 phosphorylates and destabilizes BZR1, a positive regulator of the brassinosteroid signaling pathway in Arabidopsis. Proc Natl Acad Sci USA 99:10185-90 https://doi.org/10.1073/pnas.152342599
- Kagale S, Divi UK, Krochko JE, Keller WA, Krishna P (2007) Brassinosteroid confers tolerance in Arabidopsis thaliana and Brassica napus to a range of abiotic stresses. Planta 225:353-64
- Kim TW, Wang ZY (2010) Brassinosteroid signal transduction from receptor kinases to transcription factors. Annu Rev Plant Biol 61:681-704 https://doi.org/10.1146/annurev.arplant.043008.092057
- Kutschera U, Wang ZY (2012) Brassinosteroid action in flowering plants: a Darwinian perspective. J Exp Bot 63:3511-22 https://doi.org/10.1093/jxb/ers065
- Lee T, Kim H, Lee I (2015a) Network-assisted crop systems genetics: network inference and integrative analysis. Curr Opin Plant Biol 24:61-70 https://doi.org/10.1016/j.pbi.2015.02.001
- Lee T, Yang S, Kim E, Ko Y, Hwang S, Shin J, Shim JE, Shim H, Kim H, Kim C and others (2015b) AraNet v2: an improved database of co-functional gene networks for the study of Arabidopsis thaliana and 27 other nonmodel plant species. Nucleic Acids Res 43:D996-1002 https://doi.org/10.1093/nar/gku1053
- Li J, Chory J (1997) A putative leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. Cell 90:929-38 https://doi.org/10.1016/S0092-8674(00)80357-8
- Li J, Wen J, Lease KA, Doke JT, Tax FE, Walker JC (2002) BAK1, an Arabidopsis LRR receptor-like protein kinase, interacts with BRI1 and modulates brassinosteroid signaling. Cell 110:213-22 https://doi.org/10.1016/S0092-8674(02)00812-7
-
Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the
$2^{-{\Delta}{\Delta}Ct}$ method. Methods 25: 402-408 https://doi.org/10.1006/meth.2001.1262 - Oh E, Zhu JY, Ryu H, Hwang I, Wang ZY (2014) TOPLESS mediates brassinosteroid-induced transcriptional repression through interaction with BZR1. Nat Commun 5:4140
- Rhee SY, Dickerson J, Xu D (2006) Bioinformatics and its applications in plant biology. Annu Rev Plant Biol 57:335-60 https://doi.org/10.1146/annurev.arplant.56.032604.144103
- Ryu H, Cho H, Bae W, Hwang I (2014) Control of early seedling development by BES1/TPL/HDA19-mediated epigenetic regulation of ABI3. Nat Commun 5:4138 https://doi.org/10.1038/ncomms5138
- Ryu H, Cho H, Kim K, Hwang I (2010a) Phosphorylation dependent nucleocytoplasmic shuttling of BES1 is a key regulatory event in brassinosteroid signaling. Mol Cells 29:283-90 https://doi.org/10.1007/s10059-010-0035-x
- Ryu H, Kim K, Cho H, Hwang I (2010b) Predominant actions of cytosolic BSU1 and nuclear BIN2 regulate subcellular localization of BES1 in brassinosteroid signaling. Mol Cells 29:291-6 https://doi.org/10.1007/s10059-010-0034-y
- Ryu H, Kim K, Cho H, Park J, Choe S, Hwang I (2007) Nucleocytoplasmic shuttling of BZR1 mediated by phosphorylation is essential in Arabidopsis brassinosteroid signaling. Plant Cell 19:2749-62 https://doi.org/10.1105/tpc.107.053728
- Serin EA, Nijveen H, Hilhorst HW, Ligterink W (2016) Learning from Co-expression Networks: Possibilities and Challenges. Front Plant Sci 7:444
- Shannon P, Markiel A, Ozier O, Baliga NS, Wang JT, Ramage D, Amin N, Schwikowski B, Ideker T (2003) Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res 13:2498-504 https://doi.org/10.1101/gr.1239303
- Shin SY, Chung H, Kim SY, Nam KH (2016) BRI1-EMS-suppressor 1 gain-of-function mutant shows higher susceptibility to necrotrophic fungal infection. Biochem Biophys Res Commun 470:864-9 https://doi.org/10.1016/j.bbrc.2016.01.128
- Supek F, Bosnjak M, Skunca N, Smuc T (2011) REVIGO summarizes and visualizes long lists of gene ontology terms. PLoS One 6:e21800 https://doi.org/10.1371/journal.pone.0021800
- Vriet C, Russinova E, Reuzeau C (2012) Boosting crop yields with plant steroids. Plant Cell 24:842-57 https://doi.org/10.1105/tpc.111.094912
- Wang ZY, Bai MY, Oh E, Zhu JY (2012) Brassinosteroid signaling network and regulation of photomorphogenesis. Annu Rev Genet 46:701-24 https://doi.org/10.1146/annurev-genet-102209-163450
- Wang ZY, Nakano T, Gendron J, He J, Chen M, Vafeados D, Yang Y, Fujioka S, Yoshida S, Asami T and others (2002) Nuclearlocalized BZR1 mediates brassinosteroid-induced growth and feedback suppression of brassinosteroid biosynthesis. Dev Cell 2:505-13 https://doi.org/10.1016/S1534-5807(02)00153-3
- Yin Y, Wang ZY, Mora-Garcia S, Li J, Yoshida S, Asami T, Chory J (2002) BES1 accumulates in the nucleus in response to brassinosteroids to regulate gene expression and promote stem elongation. Cell 109:181-91 https://doi.org/10.1016/S0092-8674(02)00721-3
피인용 문헌
- Interplay between Brassinosteroid and ABA signaling during early seedling development vol.44, pp.3, 2017, https://doi.org/10.5010/JPB.2017.44.3.264