References
- Agarwal, P.K., Agarwal, P., Reddy, M., and Sopory, S.K. (2006). Role of DREB transcription factors in abiotic and biotic stress tolerance in plants. Plant Cell Rep. 25, 1263-1274 https://doi.org/10.1007/s00299-006-0204-8
- Benjamin, J.G., and Nielsen, D.C. (2006). Water deficit effects on root distribution of soybean, field pea and chickpea. Field Crops Res. 97, 248-253 https://doi.org/10.1016/j.fcr.2005.10.005
- Bergler, J., and Hoth, S. (2011). Plant U-box armadillo repeat proteins AtPUB18 and AtPUB19 are involved in salt inhibition of germination in Arabidopsis. Plant Biol. (Stuttg) 13, 725-730 https://doi.org/10.1111/j.1438-8677.2010.00431.x
- Byun, M.Y., Lee, J., Cui, L.H., Kang, Y., Oh, T.K., P, H., Lee, H., and Kim, W.T. (2015). Constitutive expression of DaCBF7, an Antarctic vascular plant, Deschampsia antarctica CBF homolog, resulted in improved cold tolerance in transgenic rice plants. Plant Science 236, 61-74 https://doi.org/10.1016/j.plantsci.2015.03.020
- Cho, S.K., Chung, H.S., Ryu, M.Y., Park, M.J., Lee, M.M., Bahk, Y.Y., Kim, J., Pai, H.S., and Kim, W.T. (2006). Heterologous expression and molecular and cellular characterization of CaPUB1 encoding a hot pepper U-Box E3 ubiquitin ligase homolog. Plant Physiol. 142, 1664-1682 https://doi.org/10.1104/pp.106.087965
- Cho, S.K., Ryu, M.Y., Song, C., Kwak, J.M., and Kim, W.T. (2008). Arabidopsis PUB22 and PUB23 are homologous U-Box E3 ubiquitin ligases that play combinatory roles in response to drought stress. Plant Cell 20, 1899-1914 https://doi.org/10.1105/tpc.108.060699
- Cho, S.K., Ryu, M.Y., Seo, D.H., Kang, B.G., and Kim, W.T. (2011). The Arabidopsis RING E3 ubiquitin ligase AtAIRP2 plays combinatory roles with AtAIRP1 in abscisic acid-mediated drought stress responses. Plant physiol. 157, 2240-2257 https://doi.org/10.1104/pp.111.185595
- Dubouzet, J.G., Sakuma, Y., Ito, Y., Kasuga, M., Dubouzet, E.G., Miura, S., Seki, M., Shinozaki, K., and Yamaguchi-Shinozaki, K. (2003). OsDREB genes in rice, Oryza sativa L., encode transcription activators that function in drought-, high-salt- and coldresponsive gene expression. Plant J. 33, 751-763 https://doi.org/10.1046/j.1365-313X.2003.01661.x
- Gilmour, S.J., Sebolt, A.M., Salazar, M.P., Everard, J.D., and Thomashow, M.F. (2000). Over-expression of the Arabidopsis CBF3 transcriptional activator mimics multiple biochemical changes associated with cold acclimation. Plant Physiol. 124, 1854-1865 https://doi.org/10.1104/pp.124.4.1854
- Han, M., Kim, C.-Y., Lee, J., Lee, S.-K., and Jeon, J.-S. (2014). OsWRKY42 represses OsMT1d and induces reactive oxygen species and leaf senescence in rice. Mol. Cells 37, 532-539 https://doi.org/10.14348/molcells.2014.0128
- Ito, Y., Katsura, K., Maruyama, K., Taji, T., Kobayashi, M., Seki, M., Shinozaki, K., and Yamaguchi-Shinozaki, K. (2006). Functional analysis of rice DREB1/CBF-type transcription factors involved in cold-responsive gene expression in transgenic rice. Plant Cell Physiol. 47, 141-153 https://doi.org/10.1093/pcp/pci230
- Kim, S.I., and Tai, T.H. (2011). Evaluation of seedling cold tolerance in rice cultivars: a comparison of visual ratings and quantitative indicators of physiological changes. Euphytica 178, 437-447 https://doi.org/10.1007/s10681-010-0343-4
- Kim, S.J., and Kim, W.T. (2013). Suppression of Arabidopsis RING E3 ubiquitin ligase AtATL78 increases tolerance to cold stress and decreases tolerance to drought stress. FEBS Lett. 587, 2584-2590 https://doi.org/10.1016/j.febslet.2013.06.038
- Lee, J-H., and Kim, W.T. (2011). Regulation of abiotic stress signal transduction by E3 ubiquitin ligases in Arabidopsis. Mol. Cells 31, 201-208 https://doi.org/10.1007/s10059-011-0031-9
- Lichtenthaler, H.K. (1987). Chlorophylls and carotenoids: Pigments of photosynthetic biomembranes. Methods Enzymol. 148, 350-382 https://doi.org/10.1016/0076-6879(87)48036-1
- Liu, F., Xu, W., Wei, Q., Zhang, Z., Xing, Z., Tan, L., Di, C., Yao, D., Wang, C., Tan, Y., et al. (2010). Gene expression profiles deciphering rice phenotypic variation between Nipponbare (Japonica) and 93-11 (Indica) during oxidative stress. PLoS One 5, e8632 https://doi.org/10.1371/journal.pone.0008632
- Liu, Y.C., Wu, Y.R., Huang, X.H., Sun, J., and Xie, Q. (2011). AtPUB19, a U-box E3 ubiquitin ligase, negatively regulates abscisic acid and drought responses in Arabidopsis thaliana. Mol. Plant 4, 938-946 https://doi.org/10.1093/mp/ssr030
- Lyzenga, W.J., and Stone, S.L. (2012). Abiotic stress tolerance mediated by protein ubiquitination. J. Exp. Bot. 63, 599-616 https://doi.org/10.1093/jxb/err310
- Mackill, D.J., and Lei, X. (1997). Genetic variation for traits related to temperature adaptation of rice cultivars. Crop Sci. 37, 1340-1346 https://doi.org/10.2135/cropsci1997.0011183X003700040051x
- Park, J.J., Yi, J., Yoon, J., Cho, L.H., Ping, J., Jeong, H.J., Cho, S.K., Kim, W.T., and An, G. (2011). OsPUB15, an E3 ubiquitin ligase, functions to reduce cellular oxidative stress during seedling establishment. Plant J. 65, 194-205 https://doi.org/10.1111/j.1365-313X.2010.04416.x
- Praba, M.L., Cairns, J.E., Babu, R.C., and Lafitte, H.R. (2009). Identification of physiological traits underlying cultivar differences in drought tolerance in rice and wheat. J. Agron. Crop Sci. 195, 30-46 https://doi.org/10.1111/j.1439-037X.2008.00341.x
- Seo, D.H., Ryu, M.Y., Jammes, F., Hwang, J.H., Turek, M., Kang, B.G., Kwak, J.M., and Kim, W.T. (2012). Roles of four Arabidopsis U-box E3 ubiquitin ligases in negative regulation of abscisic acid-mediated drought stress responses. Plant Physiol. 160, 556-568 https://doi.org/10.1104/pp.112.202143
- Shaw, C.H. (1995). Introduction of cloning plasmids into Agrobacterium tumefaciens. In Plant gene transfer and expression protocols, Springer New York, 49, 33-37
- Shen, C., Li, D., He, R., Fang, Z., Xia, Y., Gao, J., Shen, H., and Cao, M. (2014). Comparative transcriptome analysis of RNAseq data for cold-tolerant and cold-sensitive rice genotypes under cold stress. J. Plant Biol. 56, 337-348
- Shinozaki, K., and Yamaguchi-Shinozaki, K. (2000). Molecular responses to dehydration and low temperature: differences and cross-talk between two stress signaling pathways. Curr. Opin. Plant Biol. 3, 217-223 https://doi.org/10.1016/S1369-5266(00)00067-4
- Stegmann, M., Anderson, R.G., Ichimura, K., Pecenkova, T., Reuter, P., Zarsky, V., McDowell, J.M., Shirasu, K., and Trujillo, M. (2012). The ubiquitin ligase PUB22 targets a subunit of the exocyst complex required for PAMP-triggered responses in Arabidopsis. Plant Cell 24, 4703-4716 https://doi.org/10.1105/tpc.112.104463
- Su, C.F., Wang, Y.C., Hsieh, T.H., Tseng, T.H., Lu, C.A., Tseng, T.H., and Yu, S.M. (2010). A novel MYBS3-dependent pathway confers cold tolerance in rice. Plant Physiol. 153, 145-158 https://doi.org/10.1104/pp.110.153015
- Thomashow, M.F. (2010). Molecular basis of plant cold acclimation: insights gained from studying the CBF cold response pathway. Plant Physiol. 154, 571-577 https://doi.org/10.1104/pp.110.161794
- Tripathi, R.D., Tripathi, P., Dwivedi, S., Dubey, S., Chatterjee, S., Chakrabarty, D., and Trivedi, P.K. (2012). Arsenomics: omics of arsenic metabolism in plants. Front. Physiol. 3, 275
- Trujillo, M., Ichimura, K., Casais, C., and Shirasu, K. (2008). Negative regulation of PAMP-triggered immunity by an E3 ubiquitin ligase triplet in Arabidopsis. Curr. Biol. 18, 1396-1401 https://doi.org/10.1016/j.cub.2008.07.085
- Vierstra, R.D. (2009). The ubiquitin-26S proteasome system at the nexus of plant biology. Nat. Rev. Mol. Cell. Biol. 110, 385-397
- Wang, Q., Guan, Y., Wu, Y., Chen, H., Chen, F., and Chu, C. (2008). Overexpression of a rice OsDREB1F gene increases salt, drought, and low temperature tolerance in both Arabidopsis and rice. Plant Mol. Biol. 67, 589-602 https://doi.org/10.1007/s11103-008-9340-6
- Wang, C., Wei, Q., Zhang, K., Wang, L., Liu, F., Zhao, L., Tan, Y., Di, C., Yan, H., Yu, J., et al. (2013). Down-regulation of OsSPX1 causes high sensitivity to cold and oxidative stresses in rice seedlings. PLoS One 8, e81849 https://doi.org/10.1371/journal.pone.0081849
- Xu, M., Li, L., Fan, Y., Wan, J., and Wang, L. (2011). ZmCBF3 overexpression improves tolerance to abiotic stress in transgenic rice (Oryza sativa) without yield penalty. Plant Cell Rep. 30, 1949-1957 https://doi.org/10.1007/s00299-011-1103-1
- Yang, C.W., Gonzalez-Lamothe, R., Ewan, R.A., Rowland, O., Yoshioka, H., Shenton, M., Ye, H., O'Donnell, E., Jones, J.D., and Sadanandom, A. (2006). The E3 ubiquitin ligase activity of Arabidopsis PLANT U-BOX17 and its functional tobacco homolog ACRE276 are required for cell death and defense. Plant Cell 18, 1084-1098 https://doi.org/10.1105/tpc.105.039198
- Yee, D., and Goring, D.R. (2009). The diversity of plant U-box E3 ubiquitin ligases: from upstream activators to downstream target substrates. J. Exp. Bot. 60, 1109-1121 https://doi.org/10.1093/jxb/ern369
- Zeng, L.R., Qu, S., Bordeos, A., Yang, C., Baraoidan, M., Yan, H., Xie, Q., Nahm, B.H., Leung, H., and Wang, G.L. (2004). Spotted leaf11, a negative regulator of plant cell death and defense, encodes a U-box/armadillo repeat protein endowed with E3 ubiquitin ligase activity. Plant Cell 16, 2795-2808 https://doi.org/10.1105/tpc.104.025171
- Zeng, D-E., Hou, P., Xiao, F., and Liu, Y. (2014). Overexpressing a novel RING-H2 finger protein gene, OsRHP1, enhances drought and salt tolerance in rice (Oryza sativa L.). J. Plant Biol. 57, 357-365 https://doi.org/10.1007/s12374-013-0481-z
- Zhang, Q., Jiang, N., Wang, G.L., Hong, Y., and Wang, Z. (2013). Advances in understanding cold sensing and the coldresponsive network in rice. Adv. Crop Sci. Tech. 1, 104
Cited by
- Molecular characterization, expression pattern and function analysis of the rice OsDUF866 family vol.31, pp.2, 2017, https://doi.org/10.1080/13102818.2016.1268932
- Molecular characterization and function analysis of the rice OsDUF946 family vol.31, pp.3, 2017, https://doi.org/10.1080/13102818.2017.1289122
- Homologous U-box E3 Ubiquitin Ligases OsPUB2 and OsPUB3 Are Involved in the Positive Regulation of Low Temperature Stress Response in Rice (Oryza sativa L.) vol.8, 2017, https://doi.org/10.3389/fpls.2017.00016
- Comparative physiological and transcriptomic analyses provide integrated insight into osmotic, cold, and salt stress tolerance mechanisms in banana vol.7, 2017, https://doi.org/10.1038/srep43007
- Molecular characterization and functional analysis of the OsPsbR gene family in rice vol.292, pp.2, 2017, https://doi.org/10.1007/s00438-016-1273-1
- Rapid Regeneration and Reuse of Silica Columns from PCR Purification and Gel Extraction Kits vol.8, pp.1, 2018, https://doi.org/10.1038/s41598-018-30316-w
- Differential gene expression profiling through transcriptome approach of Saccharum spontaneum L. under low temperature stress reveals genes potentially involved in cold acclimation vol.8, pp.4, 2018, https://doi.org/10.1007/s13205-018-1194-2
- OsDIRP1, a Putative RING E3 Ligase, Plays an Opposite Role in Drought and Cold Stress Responses as a Negative and Positive Factor, Respectively, in Rice ( Oryza sativa L.) vol.9, pp.None, 2016, https://doi.org/10.3389/fpls.2018.01797
- Global Ubiquitome Profiling Revealed the Roles of Ubiquitinated Proteins in Metabolic Pathways of Tea Leaves in Responding to Drought Stress vol.9, pp.None, 2019, https://doi.org/10.1038/s41598-019-41041-3
- Molecular characterization and function analysis of the rice OsDUF1191 family vol.33, pp.1, 2019, https://doi.org/10.1080/13102818.2019.1684843
- Transcriptome profiling and phytohormone responses of Arabidopsis roots to different ambient temperatures vol.14, pp.1, 2016, https://doi.org/10.1080/17429145.2019.1634770
- The involvement of wheat U‐box E3 ubiquitin ligase TaPUB1 in salt stress tolerance vol.62, pp.5, 2016, https://doi.org/10.1111/jipb.12842
- Abiotic Stress-Induced Actin-Depolymerizing Factor 3 From Deschampsia antarctica Enhanced Cold Tolerance When Constitutively Expressed in Rice vol.12, pp.None, 2021, https://doi.org/10.3389/fpls.2021.734500
- TaPUB15 , a U‐Box E3 ubiquitin ligase gene from wheat, enhances salt tolerance in rice vol.10, pp.1, 2021, https://doi.org/10.1002/fes3.250
- The Ubiquitin Switch in Plant Stress Response vol.10, pp.2, 2016, https://doi.org/10.3390/plants10020246
- Evolutionary and Characteristic Analysis of RING-DUF1117 E3 Ubiquitin Ligase Genes in Gossypium Discerning the Role of GhRDUF4D in Verticillium dahliae Resistance vol.11, pp.8, 2016, https://doi.org/10.3390/biom11081145
- Vitis vinifera VvPUB17 functions as a E3 ubiquitin ligase and enhances powdery mildew resistance via the salicylic acid signaling pathway vol.11, pp.3, 2016, https://doi.org/10.3233/jbr-210709
- Genome-wide association study of yield and related traits in common wheat under salt-stress conditions vol.21, pp.1, 2016, https://doi.org/10.1186/s12870-020-02799-1