참고문헌
- Au KF, Underwood JG, Lee L, Wong WH. 2012. Improving PacBio long read accuracy by short read alignment. PLoS One. 7: e46679. https://doi.org/10.1371/journal.pone.0046679
- Benson G. 1999. Tandem repeats finder: a program to analyze DNA sequences. Nucleic acids research. 27: 573. https://doi.org/10.1093/nar/27.2.573
- Bindler G, Plieske J, Bakaher N, Gunduz I, Ivanov N et al. 2011. A high density genetic map of tobacco (Nicotiana tabacum L.) obtained from large scale microsatellite marker development. Theoretical and Applied Genetics. 123: 219-230. https://doi.org/10.1007/s00122-011-1578-8
- Carneiro MO, Russ C, Ross MG, Gabriel SB, Nusbaum C, DePristo MA. 2012. Pacific biosciences sequencing technology for genotyping and variation discovery in human data. BMC Genomics 13:375. https://doi.org/10.1186/1471-2164-13-375
- Chistiakov DA, Hellemans B, Haley CS, Law AS, Tsigenopoulos CS., Kotoulas G, Bertotto D, Libertini A, Volckaert FA. 2005. A microsatellite linkage map of the European sea bass Dicentrarchus labrax L. Genetics. 170: 821-1826.
- Choi JI, Lee YH, Ha TM, Jeon DH, Chi JH, Shin PG. 2015. Characteristics of new mid-high temperature adaptable oyster mushroom variety "Heuktari" for bottle culture. Journal of Mushroom. 13: 74-78. https://doi.org/10.14480/JM.2015.13.1.74
- Collard BCY, Mackill DJ. 2008. Marker-assisted selection: an approach for precision plant breeding in the twenty-first century. Philosophical Transactions of the Royal Society B: Biological Sciences 363: 557-572. https://doi.org/10.1098/rstb.2007.2170
- da Maia LC, Palmieri DA, de Souza VQ, Kopp MM, de Carvalho FIF, Costa de Oliveira A. 2008. SSR Locator: Tool for Simple Sequence Repeat Discovery Integrated with Primer Design and PCR Simulation. International Journal of Plant Genomics 2008:1-9.
- Ellegren H. 2004. Microsatellites: simple sequences with complex evolution. Nat Rev Genet. 5: 435-445.
- El-Rodeny W, Kimura M, Hirakawa H, Sabah A, Shirasawa K et al. 2014. Development of EST-SSR markers and construction of a linkage map in faba bean (Vicia faba). Breeding Science. 64: 252-263. https://doi.org/10.1270/jsbbs.64.252
- Im CH, Park Y-H, Hammel KE, Park B, Kwon SW et al. 2016. Construction of a genetic linkage map and analysis of quantitative trait loci associated with the agronomically important traits of Pleurotus eryngii. Fungal Genetics and Biology. 92: 50-64. https://doi.org/10.1016/j.fgb.2016.05.002
- Karaoglu H, Lee CMY, Meyer W. 2004. Survey of simple sequence repeats in completed fungal genomes. Molecular Biology and Evolution. 22: 639-649. https://doi.org/10.1093/molbev/msi057
- Labbe J, Murat C, Morin E, Le Tacon F, Martin F. 2011. Survey and analysis of simple sequence repeats in the Laccaria bicolor genome, with development of microsatellite markers. Current Genetics 57: 75-88. https://doi.org/10.1007/s00294-010-0328-9
- Lee BJ, Kim YG, Kim HK, Yang ES, Lim YP. 2010. Studies on the development of mushroom media for bottle culture in new Pleurotus ostreatus 'Miso'. J Mushroom Sci Prod. 8: 37-40.
- Li Y-C, Korol AB, Fahima T, Nevo E. 2004. Microsatellites Within Genes: Structure, Function, and Evolution. Mol Biol Evol. 21(6): 991-1007 https://doi.org/10.1093/molbev/msh073
- Loire E, Higuet D, Netter P, Achaz G. 2013. Evolution of coding microsatellites in primate genomes. Genome Biol Evol. 5: 283-295. https://doi.org/10.1093/gbe/evt003
- Miah G, Rafii M, Ismail M, Puteh A, Rahim H et al. 2013. A Review of Microsatellite Markers and Their Applications in Rice Breeding Programs to Improve Blast Disease Resistance. Inter J Molecular Sci. 14: 22499-22528. https://doi.org/10.3390/ijms141122499
- Ministry for Agriculture, Food, Rural Affairs (MAFRA). Republic of Korea. 2016. The actual putout of oil seeds and cash crops in 2015:pp63
- Moxon R, Bayliss C, Hood D. 2006. Bacterial contingency loci: the role of simple sequence DNA repeats in bacterial adaptation. Annu Rev Genet. 40: 307-333. https://doi.org/10.1146/annurev.genet.40.110405.090442
- Qu J, Huang C, Zhang J. 2016. Genome-wide functional analysis of SSR for an edible mushroom Pleurotus ostreatus. Gene. 575: 524-530. https://doi.org/10.1016/j.gene.2015.09.027
- Riley R, Salamov AA, Brown DW, Nagy LG, Floudas D et al. 2014. Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi. Pro Nat Acad Sci. 111: 9923-9928. https://doi.org/10.1073/pnas.1400592111
- Ryu JS, Kim KH, Im CH, Je HJ, Kim MK, Chae SM. 2012. Complete Genome Sequence of Pleurotus eryngii KNR2312 Using the Next Generation Sequencing (NGS). 80th meeting of the mycological society of America. The mycological society of America. New Haven, CT. USA.
- Varshney RK, Bertioli DJ, Moretzsohn MC, Vadez V, Krishnamurthy L et al. 2009. The first SSR-based genetic linkage map for cultivated groundnut (Arachis hypogaea L.). Theo Appl Genetics. 118: 729-739. https://doi.org/10.1007/s00122-008-0933-x
- Wei W, Davis RE, Suo X, Zhao Y. 2015. Occurrence, distribution and possible functional roles of simple sequence repeats in phytoplasma genomes. Inter J syste evol microbiol. 65: 2748-2760. https://doi.org/10.1099/ijs.0.000273
- Yoon M-Y, Moe KT, Kim D-Y, Rho I-R, Kim S et al. 2012. Genetic diversity and population structure analysis of strawberry (Fragaria x ananassa Duch.) using SSR markers.
- Zhang P, Li J, Li X, Liu X, Zhao X, Lu Y. 2011. Population Structure and Genetic Diversity in a Rice Core Collection (Oryza sativa L.) Investigated with SSR Markers. PLoS One. 6: e27565. https://doi.org/10.1371/journal.pone.0027565