한국버섯학회지 (Journal of Mushroom)

  • 제12권3호
  • /
  • Pages.154-162
  • /
  • 2014
  • /
  • 1738-0294(pISSN)
  • /
  • 2288-8853(eISSN)
한국버섯학회 (The Korean Society of Mushroom Science)
권호 표지
DOI QR코드

DOI QR Code

Phylogenetic relationships of Pleurotus species based on RAPD analysis

  • Choi, Sun-Gyu (Mushroom Research Division, National Institute of Horticultural & Herbal Science, RDA) ;
  • Jang, Kab-Yeul (Mushroom Research Division, National Institute of Horticultural & Herbal Science, RDA) ;
  • Kim, Gyu-Hyun (Department of Biotechnology, Yonam college of Agriculture) ;
  • Kong, Won-Sik (Mushroom Research Division, National Institute of Horticultural & Herbal Science, RDA) ;
  • Jo, Jae-Sun (Department of Food Engineering, Kyung Hee University) ;
  • Kim, Hae-Yeong (Mushroom Research Division, National Institute of Horticultural & Herbal Science, RDA) ;
  • Yoo, Young-Bok (Mushroom Research Division, National Institute of Horticultural & Herbal Science, RDA)
  • 투고 : 2014.08.29
  • 심사 : 2014.09.24
  • 발행 : 2014.09.30
PDF 다운로드
⟨ 이전 논문 다음 논문 ⟩

초록

Oyster mushrooms including of P. ostreatus, P. eryngii, P. pulmonarius and P. cornucopiae are one of the famous mushrooms for foods in Korea. RAPD were carried out using 14 of oligoprimers to analyze the phylogenetic relationship among 57 strains of 32 Pleurotus species. Most of species formed the minimum clade with strains within species and was divided respectively species. Therefore clade was separated well in accordance species. Pleurotus species formed again clade to be added in close related to other species, and were discriminated by sixteen clades with each representative species including high similarity groups. Sixteen clades were composed representative species according to each clade. There were clade I of P. pulmonarius(P. sajor-caju, P. opuntiae, P. sapidus), clade II of P. eryngii(P. fuscus var. ferulae, P. fossulatus), clade III of P. ostreatus(P. ostreatus var. columbinus, P. spodoleucus, P. floridanus), clade IV of P. florida, clade V of P. djamor(P. flabellatus, P. incarnates, P. salmoneo-stramineus), clade VII of P. populinus(P. subareolatus), clade VIII of P. cystidiosus(P. cystidiosus var. formosensis), clade X of P. dryinus(P. dryinus var. pometi), clade XIV of P. cornucopiae(P. citrinopilieatus, P. euosmus), and clade XV of P. australis. These species were representative species each clades. Five species, P. ulmarius(clade VI), P. griseus(clade IX), P. calyptratus(clade XI), P. lampas(clade XII), P. smithii(clade XIII)and P. serotinus (clade XVI) were used each one strain in analysis, so they were clustered other groups.

키워드

참고문헌

  1. Berg DE, Akopyants NS, Kersulyte. 1994. Fingerprinting microbial genomes using the RAPD or AP-PCR method. Meth Mol Cell Biol 5:13-24.
  2. Bernie M, Daniel J. R. 1988. Interspecific allozyme variation within the fungal genus Pleurotus. Trans Bri Mycol Soc 90:29-36 https://doi.org/10.1016/S0007-1536(88)80176-1
  3. Booth T. 1971. Chapter II. fungal culture media in Methods. Pp.49-94. In: Microbiology vol 4. Academic Press. London and New York
  4. Breene WM. 1990. Nutritional and medicinal value of speciality mushrooms. J Food Prot 53:883-894 https://doi.org/10.4315/0362-028X-53.10.883
  5. Bresinsky A, Fischer M, Meixner B, Paulus W. 1987. Speciation in Pleurotus. Mycologia 79:234-245 https://doi.org/10.2307/3807657
  6. Corner EJJ. 1981. The agaric genera Lentinus, Panus, and Pleurotus. Vaduz: J. Cramer.
  7. Eger G, Li SF, Leal-Lara H. 1979. Contribution to the discussion on the species concept in the Pleurotus ostrestus complex. Mycologia 71:577-588 https://doi.org/10.2307/3759067
  8. Gonzalez O, Labarere J. 2000. Phylogenetic relationshiqs of Pleurotus species according to the sequence and secondary structure of the mitochondrial small-subunit rRNA V4, V6 and V9 domains. Microbiology 146:209-221 https://doi.org/10.1099/00221287-146-1-209
  9. Graham GC. 1994. A simplified method for the preparation of fungal genomic DNA for PCR and RAPD analysis. Biotech 16(1):49-50
  10. Gunde-Cimerman N. 1999. Medicinal value of the genus Pleurotus (Fr.) P. Karst. (Agaricales S.R., Basidiomycetes). Int J Med Mushrooms 1:69-80 https://doi.org/10.1615/IntJMedMushrooms.v1.i1.50
  11. Guzman G, Montoya L, Mata G, Salmones D. 1994. Studies in the genus Pleurotus III. The varieties of P. ostreatuscomplex based in interbreeding strains and in the study of Basidiomycota obtained in culture. Mycotaxon 50:365-378
  12. Hilber O. 1982. Die gattung Pleurotus (Fr.) Kummer. Vaduz: J. Cramer
  13. Hobbs C. 1995. An exploration of traditional, healing and culture. In: Medicinal mushrooms. Botanica Press. Santa Cruz, CA. USA
  14. Iracabal B, Zervakis G, Labarere J. 1995, Molecular systematic of the genus Pleurotus : analysis of the restriction polymorphism in ribosomal DNA. Microbiology 141:1479-1490 https://doi.org/10.1099/13500872-141-6-1479
  15. Johnson, LF, Carl EA. 1972. Chapter 16 Culture media. Pp.187-208. In: Methods for Research on the Ecology of Soil-borne Plant Pathogens. Burgees.
  16. Kersulyte D, Woods JP, Keath EJ, Goldman WE, Berg DE. 1992. Diversity among clinical isolates of Histoplasma capsulatum detected by polymerase chain reaction with arbitrary primers. J Bacteriol 174:7075-7079 https://doi.org/10.1128/jb.174.22.7075-7079.1992
  17. Khush RS, Becker E, Wach M. 1992. DNA amplification polymorphisms of the cultivated mushroom Agaricus bisporus. Appl Environ Microbiol 58:2971-2977
  18. Kim BG, Jeong MJ, Lee CS, Lee HK, Yoo YB, Ryu JC. 1995. Parameters affection polymerase chaim reaction in rapd analysis of Pleurotus spp. Korean J Mycol 23(3): 202-208
  19. Kim MW, Park MH, Kim GH. 1997. Effects of mushroom protein-bound polysaccharides on the blood glucose levels and energy metabolism in streptozotocin-induced diabetic rats. J Korean Nut 30:743-750
  20. Kim OH, Yang BK, Hur NI, Das S, Yun JW, Choi YS, Song CH. 2001. Hypoglycemic effects of mycelia produced from submerged culture of Phellinus linteus (Berk. Et Curt) Teng (A phyllopharomycetideae) in streptozotocin-induced diabetic rats. Int J Med Mushrooms 3:21-26
  21. Laroche A, Gaudet DA, Schaalje GB, Erickson RS, Ginns J. 1995. Grouping and identification of low temperature basidiomycetes using mating, RAPD and RFLP analyses. Mycol Res 99:297-310. https://doi.org/10.1016/S0953-7562(09)80903-9
  22. Manning DL.1977. Fruiting and mating compatibility studies in the Pleurotus ostreatus-sapidus complex. In 2nd International Mycological Congress Abstracts (ed. H. E. Bigelow & E. G. Simmons). IMC-2 Inc: Tampa Florida, 415
  23. Nei M, Li WH. 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc Nat Acad Sci 76:5269-5273. https://doi.org/10.1073/pnas.76.10.5269
  24. Pilat A. 1935. Pleurotus Fries. In Atlas des Champignons de I'Europe. Tome II, Praha: Prague.
  25. Singer R. 1986. The Agaricales in modern taxonomy 4th ed. Koenigstein: Koeltz Scientific Books.
  26. Sneath PHA, Sokal RR. 1973. Numerical taxonomy. In: The Principles and Practices of Numerical Classification. W. H. Freeman and Company. San freancisco. USA.
  27. Welsh J, McClelland M. 1990. Fingerprinting genomes using PCR with arbitrary primers. Nucl Acid Res 18:7213-7218. https://doi.org/10.1093/nar/18.24.7213
  28. Williams JG, Kubelik AR, Kenneth JL, Rafalski JA, Scott VT. 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucl Acid Res 18:6531-6535. https://doi.org/10.1093/nar/18.22.6531
  29. Zervakis G, Balis C. 1996. A pluralistic approach in the study of Pleurotus species with emphais on compatibility and physiology of the European morphotaxa. Mycol Res 100(6):717-731 https://doi.org/10.1016/S0953-7562(96)80205-X
  30. Zervakis G, Labarere J. 1992. Taxonomic relationships within the fungal genus Pleurotus as determined by isoelectric focusing analysis of enzyme patterns. J Gen Microbiol 138:635-645 https://doi.org/10.1099/00221287-138-3-635
  31. Zervakis G, Sourdis J, Balis C. 1994. Genetic variability and systematics of eleven Pleurotus species based on isozyme analysis. Mycol Res 98:329-341 https://doi.org/10.1016/S0953-7562(09)80461-9