References
- Becker HF, Motorin Y, Planta RJ, Grosjean H. 1997. The yeast gene YNL292w encodes a pseudouridine synthase (PUS4) catalyzing the formation of psi55 in both mitochondrial and cytoplasmic tRNA. Nucleic Acids Res. 25: 4493-4499. https://doi.org/10.1093/nar/25.22.4493
- Bepperling A, Alte F, Kriehuber T, Braun N, Weinkauf S, Groll M, et al. 2012. Alternative bacterial two-component small heat shock protein systems. Proc. Natl. Acad. Sci. USA 109: 20407-20412. https://doi.org/10.1073/pnas.1209565109
- Del Campo M, Recinos C, Yanez G, Pomerantz SC, Guymon R, Crain PF, et al. 2005. Number, position, and significance of the pseudouridines in the large subunit ribosomal RNA of Haloarcula marismortui and Deinococcus radiodurans. RNA 11: 210-219. https://doi.org/10.1261/rna.7209905
- DeJong W, Leunissen J, Voorter C. 1993. Evolution of the alpha-crystallin/small heat-shock protein family. Mol. Biol. Evol. 10: 103-126.
- Elsen S, Efthymiou G, Peteinatos P, Diallinas G, Kyritsis P, Moulis JM. 2010. A bacteria-specific 2[4Fe-4S] is essential in Pseudomonas aeruginosa. BMC Microbiol. 10: 271. https://doi.org/10.1186/1471-2180-10-271
- Eyles S, Gierasch L. 2010. Nature's molecular sponges: small heat shock proteins grow into their chaperone roles. Proc. Natl. Acad. Sci. USA 107: 2727-2728. https://doi.org/10.1073/pnas.0915160107
- Fontecave M, Ollagnier-de-Choudens S. 2008. Iron-sulfur cluster biosynthesis in bacteria: mechanisms of cluster assembly and transfer. Arch. Biochem. Biophys. 474: 226-237. https://doi.org/10.1016/j.abb.2007.12.014
-
Giro M, Ceccoli RD, Poli HO, Carrillo N, Lodeyro AF. 2011. An in vivo system co-expressing cyanobacterial flavodoxin and ferredoxin-
$NADP^{+}$ reductase confers increased tolerance to oxidative stress in plants. FEBS Open Bio 1: 7-13. https://doi.org/10.1016/j.fob.2011.10.004 - Feder ME, Hofmann GE. 1999. Heat-shock proteins, molecular chaperones and the stress response: evolutionary and ecological physiology. Annu. Rev. Physiol. 61: 243-282. https://doi.org/10.1146/annurev.physiol.61.1.243
- Horwitz J. 1992. Alpha-crystallin can function as a molecular chaperone. Proc. Natl. Acad. Sci. USA 89: 10449-10453. https://doi.org/10.1073/pnas.89.21.10449
- Im S, Song D, Joe M, Kim D, Park DH, Lim S. 2013. Comparative survival analysis of 12 histidine kinase mutants of Deinococcus radiodurans after exposure to DNA-damaging agents. Bioprocess Biosyst. Eng. 36: 781-789. https://doi.org/10.1007/s00449-013-0904-8
- Ishihama Y, Oda Y, Tabata T, Sato T, Nagasu T, Rappsilber J, Mann M. 2005. Exponentially modified protein abundance index (emPAI) for estimation of absolute protein amount in proteomics by the number of sequenced peptides per protein. Mol. Cell Proteomics 4: 1265-1272. https://doi.org/10.1074/mcp.M500061-MCP200
- Kaya Y, Ofengand J. 2003. A novel unanticipated type of pseudouridine synthase with homologs in bacteria, archea, and eukarya. RNA 9: 711-721. https://doi.org/10.1261/rna.5230603
- Kim YH, Cho K, Yun SH, Kim JY, Kwon KH, Yoo JS, Kim SI. 2006. Analysis of aromatic catabolic pathways in Pseudomonas putida KT 2440 using a combined proteomic approach: 2-DE/MS and cleavable isotope-coded affinity tag analysis. Proteomics 6: 1301-1318. https://doi.org/10.1002/pmic.200500329
- Kinghorn S, Conor OB, Booth I, Stansfield I. 2002. Physiological analysis of the role of truB in Escherichia coli: a role for tRNA modification in extreme temperature resistance. Microbiology 148: 3511-3520. https://doi.org/10.1099/00221287-148-11-3511
- Kota S, Misra HS. 2006. PprA: a protein implicated in radioresistance of Deinococcus radiodurans stimulates catalase activity in Escherichia coli. Appl. Microbiol. Biotechnol. 72: 790-796. https://doi.org/10.1007/s00253-006-0340-7
- Li DC, Yang F, Lu B, Chen DF, Yang WJ. 2012. Thermotolerance and molecular chaperone function of the small heat shock protein HSP20 from hyperthermophilic archaeon, Sulfolobus solfataricus P2. Cell Stress Chaperones 17: 103-108. https://doi.org/10.1007/s12192-011-0289-z
- Makarova K, Arvind L, Wolf YI, Tatusov RL, Minton KW, Koonin EV, Daly MJ. 2001. Genome of the extremely radiation-resistant bacterium Deinococcus radiodurans viewed from the perspective of comparative genomics. Microbiol. Mol. Biol. Rev. 65: 44-79. https://doi.org/10.1128/MMBR.65.1.44-79.2001
- Ofengand J. 2002. Ribosomal RNA pseudouridines and pseudouridine synthases. FEBS Lett. 514: 17-25. https://doi.org/10.1016/S0014-5793(02)02305-0
- Pan J, Wang J, Zhou Z, Yan Y, Zhang W, Lu W, et al. 2009. IrrE, a global regulator of extreme radiation resistance in Deinococcus radiodurans, enhances salt tolerance in Escherichia coli and Brassica napus. PLoS One 4: e4422. https://doi.org/10.1371/journal.pone.0004422
- Rappsilber J, Ryder U, Lamond AI, Mann M. 2002. Large scale proteomic analysis of human spliceosome. Genome Res. 12: 1231-1245. https://doi.org/10.1101/gr.473902
- Rodriguez-Manzaneque MT, Ros J, Cabiscol E, Sorribas A, Herrero E. 1999. Grx5 glutaredoxin plays a central role in protection against protein oxidative damage in Saccharomyces cerevisiae. Mol. Cell. Biol. 19: 8180-8190. https://doi.org/10.1128/MCB.19.12.8180
- Sage AE, Vasil AI, Vasil ML. 1997. Molecular characterization of mutants affected in osmoprotectant-dependant induction of phospholipase C in Pseudomonas aeruginosa POA1. Mol. Microbiol. 23: 43-56. https://doi.org/10.1046/j.1365-2958.1997.1681542.x
- Schmid AK, Howell HA, Battista JR, Peterson SN, Lidstrom ME. 2005. Global transcriptional and proteomic analysis of the Sig1 heat shock regulon of Deinococcus radiodurans. J. Bacteriol. 187: 3339-3351. https://doi.org/10.1128/JB.187.10.3339-3351.2005
- Sun Y, MacRae TH. 2005. Small heat shock proteins: molecular structure and chaperone function. Cell Mol. Life Sci. 62: 2460-2476. https://doi.org/10.1007/s00018-005-5190-4
- Sunita S, Zhenxing H, Swaathi J, Cygler M, Matte A, Sivaraman J. 2006. Domain organization and crystal structure of the catalytic domain of E. coli RluF, a pseudouridine synthase that acts on 23S rRNA. J. Mol. Biol. 359: 998-1009. https://doi.org/10.1016/j.jmb.2006.04.019
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