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Genome Sequence and Comparative Genome Analysis of Pseudomonas syringae pv. syringae Type Strain ATCC 19310

  • Park, Yong-Soon (Molecular Phytobacteriology Laboratory, Superbacteria Research Center, KRIBB) ;
  • Jeong, Haeyoung (Korean Bioinformation Center (KOBIC), KRIBB) ;
  • Sim, Young Mi (Korean Bioinformation Center (KOBIC), KRIBB) ;
  • Yi, Hwe-Su (Molecular Phytobacteriology Laboratory, Superbacteria Research Center, KRIBB) ;
  • Ryu, Choong-Min (Molecular Phytobacteriology Laboratory, Superbacteria Research Center, KRIBB)
  • Received : 2014.01.02
  • Accepted : 2014.01.15
  • Published : 2014.04.28

Abstract

Pseudomonas syringae pv. syringae (Psy) is a major bacterial pathogen of many economically important plant species. Despite the severity of its impact, the genome sequence of the type strain has not been reported. Here, we present the draft genome sequence of Psy ATCC 19310. Comparative genomic analysis revealed that Psy ATCC 19310 is closely related to Psy B728a. However, only a few type III effectors, which are key virulence factors, are shared by the two strains, indicating the possibility of host-pathogen specificity and genome dynamics, even under the pathovar level.

Keywords

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  1. Toward Complete Bacterial Genome Sequencing Through the Combined Use of Multiple Next-Generation Sequencing Platforms vol.26, pp.1, 2014, https://doi.org/10.4014/jmb.1507.07055