정보과학회지 (Communications of the Korean Institute of Information Scientists and Engineers)

한국정보과학회 (Korean Institute of Information Scientists and Engineers)
권호 표지

차세대 비교유전체 연구를 위한 생물정보학의 도전

  • 발행 : 2014.03.14
PDF 다운로드
⟨ 이전 논문 다음 논문 ⟩

초록

키워드

참고문헌

  1. M. L. Metzker, "Sequencing technologies - the next generation", Nat Rev Genet, Vol. 11, No. 1, pp. 31-46, Jan, 2010. https://doi.org/10.1038/nrg2626
  2. J. R. Miller, S. Koren, and G. Sutton, "Assembly algorithms for next-generation sequencing data", Genomics, Vol. 95, No. 6, pp. 315-27, Jun, 2010. https://doi.org/10.1016/j.ygeno.2010.03.001
  3. P. Pevzner, and R. Shamir, Bioinformatics for biologists, Cambridge ; New York: Cambridge University Press, 2011.
  4. W. Miller, K. D. Makova, A. Nekrutenko et al., "Comparative genomics", Annu Rev Genomics Hum Genet, Vol. 5, pp. 15-56, 2004. https://doi.org/10.1146/annurev.genom.5.061903.180057
  5. J. Commins, C. Toft, and M. A. Fares, "Computational biology methods and their application to the comparative genomics of endocellular symbiotic bacteria of insects", Biol Proced Online, Vol. 11, pp. 52-78, 2009. https://doi.org/10.1007/s12575-009-9004-1
  6. E. D. Green, "Strategies for the systematic sequencing of complex genomes", Nat Rev Genet, Vol. 2, No. 8, pp. 573-83, Aug, 2001. https://doi.org/10.1038/35084503
  7. P. E. Compeau, P. A. Pevzner, and G. Tesler, "How to apply de Bruijn graphs to genome assembly", Nat Biotechnol, Vol. 29, No. 11, pp. 987-91, Nov, 2011. https://doi.org/10.1038/nbt.2023
  8. C. Notredame, "Recent progress in multiple sequence alignment: a survey", Pharmacogenomics, Vol. 3, No. 1, pp. 131-44, Jan, 2002. https://doi.org/10.1517/14622416.3.1.131
  9. M. Blanchette, W. J. Kent, C. Riemer et al., "Aligning multiple genomic sequences with the threaded blockset aligner", Genome Res, Vol. 14, No. 4, pp. 708-15, Apr, 2004. https://doi.org/10.1101/gr.1933104
  10. R. S. Harris, "Improved pairwise alignment of genomic DNA", The Pennsylvania State University, 2007.
  11. M. G. Grabherr, P. Russell, M. Meyer et al., "Genomewide synteny through highly sensitive sequence alignment: Satsuma", Bioinformatics, Vol. 26, No. 9, pp. 1145-51, May 1, 2010. https://doi.org/10.1093/bioinformatics/btq102
  12. P. Pevzner, and G. Tesler, "Genome rearrangements in mammalian evolution: lessons from human and mouse genomes", Genome Res, Vol. 13, No. 1, pp. 37-45, Jan, 2003. https://doi.org/10.1101/gr.757503
  13. J. Kim, D. M. Larkin, Q. Cai et al., "Reference-assisted chromosome assembly", Proc Natl Acad Sci U S A, Vol. 110, No. 5, pp. 1785-90, Jan 29, 2013. https://doi.org/10.1073/pnas.1220349110
  14. R. L. Ge, Q. Cai, Y. Y. Shen et al., "Draft genome sequence of the Tibetan antelope", Nat Commun, Vol. 4, pp. 1858, 2013. https://doi.org/10.1038/ncomms2860