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Morphological Operations to Segment a Tumor from a Magnetic Resonance Image

  • Thapaliya, Kiran (Department of Information and Communication Engineering, Chosun University) ;
  • Kwon, Goo-Rak (Department of Information and Communication Engineering, Chosun University)
  • Received : 2013.06.25
  • Accepted : 2013.09.12
  • Published : 2014.03.31

Abstract

This paper describes an efficient framework for the extraction of a brain tumor from magnetic resonance (MR) images. Before the segmentation process, a median filter is used to filter the image. Then, the morphological gradient is computed and added to the filtered image for intensity enhancement. After the enhancement process, the thresholding value is calculated using the mean and the standard deviation of the image. This thresholding value is used to binarize the image followed by the morphological operations. Moreover, the combination of these morphological operations allows to compute the local thresholding image supported by a flood-fill algorithm and a pixel replacement process to extract the tumor from the brain. Thus, this framework provides a new source of evidence in the field of segmentation that the specialist can aggregate with the segmentation results in order to soften his/her own decision.

Keywords

References

  1. M. D. Health, S. Sarkar, T. Sanocki, and K. W. Bowyer, "A robust visual method for assessing the relative performance of edgedetection algorithms," IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 19, no. 12, pp. 1338-1359, 1997. https://doi.org/10.1109/34.643893
  2. S. Murugavalli and V. Rajamani, "A high speed parallel fuzzy Cmeans algorithm for tumor segmentation," ICGST International Journal on Bioinformatics and Medical Engineering, vol. 6, no. 1, pp. 29-34, 2006.
  3. A. S. Dewalle-Vignion, N. Betrouni, N. Makni, D. Huglo, J. Rousseau, and M. Vermandel, "A new method based on both fuzzy set and possibility theories for tumor volume segmentation on PET images," in Proceedings of the 30th Annual International Conference of IEEE Engineering in Medicine and Biology Society, Vancouver, Canada, pp. 3122-3125, 2007.
  4. S. M. Bhandarkar and P. Nammalwar, "Segmentation of multispectral MR images using a hierarchical self-organizing map," in Proceedings of the 14th IEEE Symposium on Computer-Based Medical Systems, Bethesda, MD, pp. 294-299, 2001.
  5. C. Jiang, X. Zhang, W. Huang, and C. Meinel, "Segmentation and quantification of brain tumor," in Proceedings of the IEEE Symposium on Virtual Environments, Human-Computer Interfaces and Measurement Systems, Boston, MA, pp. 61-66, 2004.
  6. M. C. Clark, L. O. Hall, D. B. Goldgof, R. Velthuizen, F. R. Murtagh, and M. S. Silbiger, "Automatic tumor segmentation using knowledge-based techniques," IEEE Transactions on Medical Imaging, vol. 17, no. 2, pp. 187-201, 1998. https://doi.org/10.1109/42.700731
  7. L. M. Fletcher-Heath, L. O. Hall, D. B. Goldgof, and F. R. Murtagh, "Automatic segmentation of non-enhancing brain tumors in magnetic resonance images," Artificial Intelligence in Medicine, vol. 21, no. 1-3, pp. 43-63, 2001. https://doi.org/10.1016/S0933-3657(00)00073-7
  8. N. Moon, E. Bullitt, K. Van Leemput, and G. Gerig, "Model-based brain and tumor segmentation," in Proceedings of the 16th International Conference on Pattern Recognition, Quebec, Canada, pp. 528-531, 2002.
  9. N. Otsu, "A threshold selection method from grey-level histogram," IEEE Transactions on System, Man and Cybernetics, vol. 9, no. 1, pp. 62-66, 1979. https://doi.org/10.1109/TSMC.1979.4310076
  10. M. Prastawa, E. Bullitt, S. Ho, and G. Gerig, "A brain tumor segmentation framework based on outlier detection," Medical Image Analysis, vol. 8, no. 3, pp. 275-283, 2004. https://doi.org/10.1016/j.media.2004.06.007
  11. R. Stokking, K. L. Vincken, and M. A. Viergever, "Automatic morphology-based brain segmentation (MBRASE) from MRI-T1 Data," NeuroImage, vol. 12, no. 6, pp. 726-738, 2000. https://doi.org/10.1006/nimg.2000.0661
  12. K. M. Iftekharuddin, J. Zheng, M. A. Islam, and R. J. Ogg, "Fractal-based brain tumor detection in multimodal MRI," Applied Mathematics and Computation, vol. 207, no. 1, pp. 23-41, 2009. https://doi.org/10.1016/j.amc.2007.10.063
  13. Z. Iscan, Z. Dokur, and T. Olmez, "Tumor detection by using Zernike moments on segmented magnetic resonance brain images," Expert Systems with Applications, vol. 37, no. 3, pp. 2540-2549, 2010. https://doi.org/10.1016/j.eswa.2009.08.003
  14. S. Taheri, S. H. Ong, and V. F. H. Chong, "Level-set segmentation of brain tumors using a threshold-based speed function," Image and Vision Computing, vol. 28, no. 1, pp. 26-37, 2010. https://doi.org/10.1016/j.imavis.2009.04.005
  15. J. J. Corso, E. Sharon, S. Dube, S. El-Saden, U. Sinha, and A. Yuille, "Efficient multilevel brain tumor segmentation with integrated Bayesian model classification," IEEE Transaction on Medical Imaging, vol. 27, no. 5, pp. 629-640, 2008. https://doi.org/10.1109/TMI.2007.912817
  16. C. Li, C. Y. Kao, J. C. Gore, and Z. Ding, "Minimization of region-scalable fitting energy for image segmentation," IEEE Transactions on Image Processing, vol. 17, no. 10, pp. 1940-1949, 2008. https://doi.org/10.1109/TIP.2008.2002304
  17. T. Kiran and G. R. Kwon, "An advanced segmentation using bitplane slicing technique in extraction of lungs region," in Proceedings of the 2nd Asian Himalayas International Conference on Internet, Kathmandu, Nepal, 2011.
  18. T. Kiran, I. C. Park, and G. R. Kwon, "An efficient extraction of pulmonary parenchyma in CT images using connected component labeling," International Journal of Information and Communication Engineering, vol. 9, no. 6, pp. 661-665, 2011.
  19. T. Kiran and G. R. Kwon, "Extraction of brain tumor based on morphological operations," in Proceedings of the 8th International Conference on Computing Technology and Information Management, Seoul, Korea, pp. 515-520, 2012.
  20. L. Singh, R. B. Dubey, and Z. A. Jaffery, "Segmentation and characterization of brain tumor from MR images," in Proceedings of International Conference on Advances in Recent Technologies in Communication and Computing, Kottayam, India, pp. 815-819, 2009.
  21. K. Thapaliya, J. Y. Pyun, C. S. Park, and G. R Kwon, "Level set method with automatic selective local statistics for brain tumor segmentation in MR images," Computerized Medical Imaging and Graphics, vol. 37, no. 7, pp. 522-537, 2013. https://doi.org/10.1016/j.compmedimag.2013.05.003

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