DOI QR코드

DOI QR Code

남일벼 돌연변이 후대 계통 'Namil(SA)-flo1'의 분질배유 특성에 대한 유전분석

Genetic Analysis on Floury Endosperm Characteristics of 'Namil(SA)-flo1', a Japonica Rice Mutant Line

  • 투고 : 2013.04.22
  • 심사 : 2013.08.05
  • 발행 : 2013.09.30

초록

쌀 가공산업을 활성화하고 소비를 촉진하여 국내 쌀 생산 기반을 유지하기 위해서는 쌀가루 제분적성을 보유한 가공용 벼 품종 개발이 시급하다. 농촌진흥청 국립식량과학원에서는 아지드화나트륨을 돌연변이원으로 활용하여 건식제분 적합성을 보유한 분질배유 돌연변이 후대계통인 'Namil(SA)-flo1'를 육성한 바 있다. 본 연구는 염색체 상에서 'Namil(SA)-flo1'의 분질배유 특성을 지배하는 유전자위를 탐색하고자 수행하였다. 주요 결과는 아래와 같다. 1. 'Namil(SA)-flo1' ${\times}$ '밀양23호'로부터 유래한 F2 94 개체로부터 종자 분질립 비율을 검정하고 54개 SSR 마커의 유전자형을 검정하여 연관성분석(association analysis)을 수행한 결과 목표 유전자위는 5번 염색체 중하단 부위로 추정되었다. 2. 목표 부위의 SSR 마커 밀도를 높여 추가 연관성분석을 실시하였고, F2:3 종자 분질립 변이의 79.7%가 5번 염색체 상의 RM164의 유전자형 변이에 의하여 설명된다는 것을 확인하였다. 3. 이를 통하여 분질배유 지배 유전자위를 5번 염색체 17.7~20.7 Mbp 부위로 추정하였으며, 추후 추가 분리집단을 이용하여 목표 유전자를 동정하고 쌀가루용 품종 개발에 활용할 수 있는 핵산정밀표지인자를 개발할 계획이다.

Rice varieties with suitable flour-making quality are required to promote rice processed-food industry and boost rice consumption in Korea. 'Namil (SA)-flo1' is an advanced mutant line with floury endosperm which shows good flour-making quality under dry-milling process. Genetic analysis was carried out to localize the chromosomal region responsible for the floury endosperm of 'Namil (SA)- flo1'. By using 94 F2 progenies, which were derived from 'Namil (SA)-flo1' ${\times}$ 'Milyang 23', floury grains percentage was investigated as phenotypic data, and genotyping was conducted with 54 SSR markers. Association analysis showed that the target genetic region for floury endosperm is on middle-low region of chromosome 5. Through further association analysis with increased number of SSR markers on chromosome 5, we found that genotypic variation in RM164 explains 79.7% of the variation in floury grains percentage of F2:3 seeds. The floury endosperm locus was localized on 17.7-20.7 Mbp region of chromosome 5 and will be further analyzed for fine mapping and gene identification.

키워드

참고문헌

  1. Hong, H. C., H. P. Moon, H. C. Choi, H. G. Hwang, Y. G. Kim, H. Y. Kim, J. D. Yea, Y. S. Shin, K. H. Kang, Y. H. Choi, Y. C. Cho, M. K. Baek, C. I. Yang, I. S. Choi, S. N. Ahn, and S. J. Yang. 2011. New cultivar developed : A lodging tolerant, opaque rice cultivar "Seolgaeng". Kor. J. Breed. Sci. 43(6) : 532-537.
  2. Hong, H. C., Y. H. Choi, H. G. Hwang, Y. G. Kim, H. P. Mun, H. Y. Kim, J. D. Yea, Y. S. Shin, Y. H. Choi, Y. C. Cho, M. K. Baek, J. H. Lee, C. I. Yang, K. H. Jeong, S. N. Ahn, and S. J. Yang. 2012a. New cultivar developed : A lodging-tolerance and dull rice cultivar "Baegjinju". Kor. J. Breed. Sci. 44(1) : 51-56.
  3. Hong, H. C., Y. G. Kim, Y. H. Choi, S. J. Yang, K. S. Lee, J. H. Lee, O. Y. Jung, C. I. Yang, Y. C. Cho, I. S. Choi, M. K. Baek, M. K. Kim, J. D. Yea, H. G. Hwang, J. H. Roh, S. R. Kim, H. C. Choi, Y. T. Lee, and S. H. Lee. 2012b. A medium-maturing, giant-embryo, and germination brown rice cultivar "Keunnun". Kor. J. Breed. Sci. 44(2) : 160-164.
  4. Jeung, J. U., B. R. Kim, Y. C. Cho, S. S. Han, H. P. Moon, Y. T. Lee, and K. K. Jena. 2007. A novel gene, Pi40(t), linked to the DNA markers derived from NBS-LRR motifs confers broad spectrum of blast resistance in rice. Theor. Appl. Genet. 115(8) : 1163-1177. https://doi.org/10.1007/s00122-007-0642-x
  5. Jeung, J. U. and Y. S. Shin. 2011a. Genetic analysis on the bacterial blight resistance gene from a wild relative, Oryza minuta. Korean J. Crop Sci. 56(1) : 57-63. https://doi.org/10.7740/kjcs.2011.56.1.057
  6. Jeung, J. U., T. H. Roh, K. H. Kang, Y. S. Shin, and Y. G. Kim. 2011b. Genetic analysis on the bacterial blight resistance gene from a wild relative, Oryza minuta. Korean J. Crop Sci. 56(2) : 124-133. https://doi.org/10.7740/kjcs.2011.56.2.124
  7. Jun, H. I., E. J. Yang, Y. S. Kim, and G. S. Song. 2008. Effect of dry and wet millings on physicochemical properties of black rice flours. J Korean Soc Food Sci Nutr. 37(7) : 900-907. https://doi.org/10.3746/jkfn.2008.37.7.900
  8. Kang, H. G., S. Park, M. Matsuoka, and G. An. 2005. Whitecore endosperm floury endosperm-4 in rice is generated by knockout mutations in the C4-type pyruvate orthophosphate dikinase gene (OsPPDKB). Plant J. 42(6) : 901-911. https://doi.org/10.1111/j.1365-313X.2005.02423.x
  9. Kang, S. Y., I. C. Shin, D. S. Kim, G. J. Lee, J. B. Kim, D. Y. Lee, S. Y. Lee, and D. J. Lee. 2008. A New Green-Kerneled glutinous rice mutant variety, "Nogwonchalbyeo" developed by gamma ray irradiation. Korean J. Breed. Sci. 40(3) : 303-307.
  10. Kaushik, R. P. and G. S. Khush. 1991. Genetic analysis of endosperm mutants in rice Oryza sativa L. Theor. Appl. Genet. 83(2) : 146-152.
  11. Kim, M. R. 2011. The status of Korean rice industry and the rice processing industry. Food Industry and Nutrition. 16(1) : 22-26.
  12. Kim, T. H. 2010. Status of rice processing industry and rice processing products. Food Preservation and Processing Industry. 9(2) : 86-96.
  13. KOSTAT. 2013. Survey results on the grain consumption of Korea in 2012. Statistics Korea.
  14. Lee, M. H. and Y. T. Lee. 2006. Bread-making properties of rice flours produced by dry, wet and semi-wet milling. J Korean Soc Food Sci Nutr. 35(7) : 886-890. https://doi.org/10.3746/jkfn.2006.35.7.886
  15. McCouch, S. R., L. Teytelman, Y. Xu, L. B. Lobos, K. Clare, and M. Walton et al. 2002. Development and mapping of 2240 new SSR markers for rice (Oryza sativa L.). DNA res. 9(6) : 199-207. https://doi.org/10.1093/dnares/9.6.199
  16. Murray, M. G. and W. F. Thompson. 1980. Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res. 8(19) : 4321-4326. https://doi.org/10.1093/nar/8.19.4321
  17. Nishio, T. and S. Iida. 1993. Mutants having a low content of 16-kDa allergenic protein in rice (Oryza sativa L.). Theor. Appl. Genet. 86(2-3) : 317-321.
  18. Qiao, Y., S. I. Lee, R. Piao, W. Jiang, T. H. Ham, and J. H. Chin et al. 2010. Fine mapping and candidate gene analysis of the floury endosperm gene, FLO (a), in rice. Mol. Cells. 29(2) : 167-174. https://doi.org/10.1007/s10059-010-0010-6
  19. Ryoo, N., C. Yu, C. S. Park, M. Y. Baik, I. M. Park, and M. H. Cho et al. 2007. Knockout of a starch synthase gene OsSSIIIa/Flo5 causes white-core floury endosperm in rice (Oryza sativa L.). Plant Cell Rep. 26(7) : 1083-1095. https://doi.org/10.1007/s00299-007-0309-8
  20. Satoh, H. and T. Omura. 1981. New endosperm mutations induced by chemical mutagens in rice, Oryza sativa L. Jpn. J. Breeding. 31(3) : 316-326. https://doi.org/10.1270/jsbbs1951.31.316
  21. She, K. C., H. Kusano, K. Koizumi, H. Yamakawa, M. Hakata, and T. Imamura et al. 2010. A novel factor FLOURY ENDOSPERM2 is involved in regulation of rice grain size and starch quality. Plant Cell. 22(10) : 3280-3294. https://doi.org/10.1105/tpc.109.070821
  22. Shin, M. S. 2010. The activation of the rice processing industry for initiating green food industry in the future. Food Preservation and Processing Industry. 9(1) : 16-37.
  23. Shin, Y. S., C. S. Park, Y. W. and Seo, J. U. Jeung. 2009. Characteristics of endosperm starch of the rice mutant lines induced by sodium azide. Korean J. Breed. Sci. 41(2) : 84-91.
  24. Zhang, D., J. Wu, Y. Zhang, and C. Shi. 2012. Phenotypic and candidate gene analysis of a new floury endosperm mutant (osagpl2-3) in rice. Plant Mol. Biol. Rep. 30(6) : 1303-1312. https://doi.org/10.1007/s11105-012-0435-5

피인용 문헌

  1. Agronomic and Genetic Evaluation on a Dull Mutant Line Derived from the Sodium Azide Treated ‘Namil’, a Non-Glutinous Japonica Rice vol.60, pp.4, 2015, https://doi.org/10.7740/kjcs.2015.60.4.448
  2. A New SNP in Rice Gene Encoding Pyruvate Phosphate Dikinase (PPDK) Associated with Floury Endosperm vol.11, pp.4, 2013, https://doi.org/10.3390/genes11040465